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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
109 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180628043
OCQO01024372
200563
Bacillota
TGG
Pro
>WENV180628260
OCQO01082018
280500
Bacillota
TGC
Ala
>WENV180628154
OCQO01054499
480520
Bacillota
TCC
Gly
>WENV180628537
OCQO01184011
290391
Bacillota
TAC
Val
>WENV180628321
OCQO01100189
280428
Bacillota
GAA
Phe
>WENV180628333
OCQO01106333
280428
Bacillota
GAA
Phe
>WENV180628725
OCQO01342007
280428
Bacillota
GAA
Phe
>WENV180628847
OCQO01461730
280428
Bacillota
GAA
Phe
>WENV180628826
OCQO01403903
480359
Bacillota
TCC
Gly
>WENV180628237
OCQO01076360
179917
Bacillota
CAT
Met
>WENV180628655
OCQO01262863
179917
Bacillota
CAT
Met
>WENV180628723
OCQO01341998
176678
Bacillota
GTC
Asp
>WENV180628785
OCQO01394733
176678
Bacillota
GTC
Asp
>WENV180628794
OCQO01400573
176678
Bacillota
GTC
Asp
>WENV180628786
OCQO01394736
280466
Bacillota
TAC
Val
>WENV180628253
OCQO01080287
280466
Bacillota
TAC
Val
>WENV180628748
OCQO01362192
313596
Bacillota
TAC
Val
>WENV180628195
OCQO01067646
184497
Bacillota
GGG
Pro
>WENV180628041
OCQO01024372
176018
Bacillota
CAT
Met
>WENV180628848
OCQO01461843
398915
Bacillota
TTC
Glu
>WENV180628508
OCQO01165456
179176
Bacillota
ACG
Arg
>WENV180628304
OCQO01093975
179176
Bacillota
ACG
Arg
>WENV180628338
OCQO01107231
406553
Bacillota
TTG
Gln
>WENV180628152
OCQO01054499
141334
Bacillota
TAG
Leu
>WENV180628806
OCQO01402052
176014
Bacillota
TCT
Arg
>WENV180627935
OCQO01003307
73664
Bacillota
CAG
Leu
>WENV180628313
OCQO01098685
5692
Bacillota
GCT
Ser
>WENV180627999
OCQO01012261
186123
Bacillota
GTC
Asp
>WENV180628791
OCQO01397648
175825
Bacillota
GAT
Ile
>WENV180628675
OCQO01280027
175825
Bacillota
GAT
Ile
>WENV180628660
OCQO01267549
175825
Bacillota
GAT
Ile
>WENV180628599
OCQO01221296
175825
Bacillota
GAT
Ile
>WENV180628413
OCQO01128680
175825
Bacillota
GAT
Ile
>WENV180628245
OCQO01078458
175825
Bacillota
GAT
Ile
>WENV180628434
OCQO01132473
280427
Bacillota
TAC
Val
>WENV180628446
OCQO01137083
284723
Bacillota
TAC
Val
>WENV180628244
OCQO01077982
284723
Bacillota
TAC
Val
>WENV180628151
OCQO01054499
283502
Bacillota
TTT
Lys
>WENV180628635
OCQO01245084
402717
Bacillota
TTC
Glu
>WENV180628815
OCQO01402770
399266
Bacillota
>WENV180628330
OCQO01105533
280646
Bacillota
TGC
Ala
>WENV180628113
OCQO01041134
189473
Bacillota
GAT
Ile
>WENV180628728
OCQO01342065
291581
Bacillota
CGG
Pro
>WENV180628771
OCQO01388745
175859
Bacillota
TCT
Arg
>WENV180628822
OCQO01403266
175847
Bacillota
GTC
Asp
>WENV180628396
OCQO01121092
175847
Bacillota
GTC
Asp
>WENV180628121
OCQO01042279
175831
Bacillota
ACG
Arg
>WENV180628410
OCQO01128077
179810
Bacillota
TCT
Arg
>WENV180628288
OCQO01090321
284627
Bacillota
GAA
Phe
>WENV180628282
OCQO01087248
284627
Bacillota
GAA
Phe
>WENV180628000
OCQO01012261
291634
Bacillota
GAA
Phe
>WENV180628769
OCQO01387663
294020
Bacillota
TAC
Val
>WENV180628692
OCQO01301715
294020
Bacillota
TAC
Val
>WENV180628647
OCQO01258165
294020
Bacillota
TAC
Val
>WENV180628577
OCQO01207658
294020
Bacillota
TAC
Val
>WENV180628531
OCQO01177664
294020
Bacillota
TAC
Val
>WENV180628397
OCQO01121092
294020
Bacillota
TAC
Val
>WENV180628379
OCQO01114296
294020
Bacillota
TAC
Val
>WENV180628306
OCQO01096030
294020
Bacillota
TAC
Val
>WENV180628270
OCQO01085234
294020
Bacillota
TAC
Val
>WENV180628464
OCQO01144866
176657
Bacillota
GTC
Asp
>WENV180628727
OCQO01342065
480322
Bacillota
CTG
Gln
>WENV180628412
OCQO01128077
401685
Bacillota
TTG
Gln
>WENV180628024
OCQO01018264
175868
Bacillota
GTT
Asn
>WENV180628825
OCQO01403617
120584
Bacillota
GTA
Tyr
>WENV180628023
OCQO01018264
398854
Bacillota
CTC
Glu
>WENV180628276
OCQO01085792
287280
Bacillota
TGT
Thr
>WENV180628091
OCQO01035235
486242
Bacillota
TCC
Gly
>WENV180628597
OCQO01221292
175899
Bacillota
GTC
Asp
>WENV180628714
OCQO01329828
175911
Bacillota
GTC
Asp
>WENV180627965
OCQO01007476
46655
Bacillota
TGA
Ser
>WENV180628836
OCQO01455370
46655
Bacillota
TGA
Ser
>WENV180628845
OCQO01461700
186051
Bacillota
GAT
Ile
>WENV180628681
OCQO01282613
186051
Bacillota
GAT
Ile
>WENV180628640
OCQO01249208
186051
Bacillota
GAT
Ile
>WENV180628228
OCQO01075721
398857
Bacillota
TTC
Glu
>WENV180628226
OCQO01075721
398857
Bacillota
TTC
Glu
>WENV180628314
OCQO01099077
117745
Bacillota
GTA
Tyr
>WENV180628255
OCQO01080287
280444
Bacillota
GGT
Thr
>WENV180628801
OCQO01401341
317482
Bacillota
TAC
Val
>WENV180628416
OCQO01129289
46643
Bacillota
TGA
Ser
>WENV180628248
OCQO01078973
179755
Bacillota
CCG
Arg
>WENV180628170
OCQO01059595
486506
Bacillota
TCC
Gly
>WENV180628470
OCQO01147517
198522
Bacillota
GAT
Ile
>WENV180628296
OCQO01091595
46835
Bacillota
TAA
Leu
>WENV180628846
OCQO01461708
203851
Bacillota
TCT
Arg
>WENV180628777
OCQO01391373
203851
Bacillota
TCT
Arg
>WENV180628286
OCQO01090321
118669
Bacillota
GTA
Tyr
>WENV180628280
OCQO01087248
118669
Bacillota
GTA
Tyr
>WENV180628762
OCQO01383648
175915
Bacillota
GTC
Asp
>WENV180628316
OCQO01099077
280462
Bacillota
GAA
Phe
>WENV180628406
OCQO01124581
398852
Bacillota
CTC
Glu
>WENV180628648
OCQO01258165
118359
Bacillota
GTA
Tyr
>WENV180628532
OCQO01177664
118359
Bacillota
GTA
Tyr
>WENV180628523
OCQO01172796
201856
Bacillota
GAT
Ile
>WENV180628452
OCQO01140472
312380
Bacillota
TAC
Val
>WENV180628290
OCQO01090943
312380
Bacillota
TAC
Val
>WENV180628039
OCQO01024372
312380
Bacillota
TAC
Val
>WENV180628811
OCQO01402480
406186
Bacillota
CTC
Glu
>WENV180628850
OCQO01462110
175857
Bacillota
GTG
His
>WENV180628223
OCQO01074983
175857
Bacillota
GTG
His
>WENV180628189
OCQO01066668
398833
Bacillota
TGT
Thr
>WENV180628398
OCQO01121139
175849
Bacillota
GTC
Asp
>WENV180628254
OCQO01080287
175849
Bacillota
GTC
Asp
>WENV180628457
OCQO01141150
179166
Bacillota
TCT
Arg
>WENV180628814
OCQO01402623
280486
Bacillota
TGC
Ala
>WENV180628122
OCQO01043019
280486
Bacillota
TGC
Ala
>WENV180628001
OCQO01012261
405393
Bacillota
GCC
Gly
>WENV180628312
OCQO01098685
56074
Bacillota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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