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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180874257
ODLQ01000071
184065
Actinomycetota
TGG
Pro
>WENV180874492
ODLQ01000819
184065
Actinomycetota
TGG
Pro
>WENV180874779
ODLQ01005869
184065
Actinomycetota
TGG
Pro
>WENV180874900
ODLQ01010719
241571
Actinomycetota
CAT
Met
>WENV180874270
ODLQ01000085
194706
Actinomycetota
CAT
Met
>WENV180874382
ODLQ01000325
284890
Actinomycetota
CTT
Lys
>WENV180874383
ODLQ01000325
284890
Actinomycetota
CTT
Lys
>WENV180875303
ODLQ01082639
401853
Actinomycetota
GTT
Asn
>WENV180875229
ODLQ01053535
434575
Actinomycetota
CTG
Gln
>WENV180874224
ODLQ01000048
284889
Actinomycetota
CTC
Glu
>WENV180875244
ODLQ01057802
480521
Actinomycetota
CCC
Gly
>WENV180874707
ODLQ01004286
184493
Actinomycetota
GGG
Pro
>WENV180874474
ODLQ01000775
184493
Actinomycetota
GGG
Pro
>WENV180874306
ODLQ01000136
184493
Actinomycetota
GGG
Pro
>WENV180874231
ODLQ01000059
184493
Actinomycetota
GGG
Pro
>WENV180875392
ODLQ01130787
443526
Actinomycetota
CAC
Val
>WENV180875339
ODLQ01098901
480461
Actinomycetota
GCA
Cys
>WENV180874284
ODLQ01000093
285880
Actinomycetota
TCT
Arg
>WENV180874178
ODLQ01000015
292656
Actinomycetota
ACG
Arg
>WENV180874801
ODLQ01006654
285876
Actinomycetota
CGT
Thr
>WENV180874952
ODLQ01015556
285876
Actinomycetota
CGT
Thr
>WENV180875174
ODLQ01042952
285876
Actinomycetota
CGT
Thr
>WENV180875230
ODLQ01053535
285873
Actinomycetota
CTC
Glu
>WENV180874287
ODLQ01000097
507958
Actinomycetota
CCC
Gly
>WENV180875063
ODLQ01026316
287251
Actinomycetota
CTT
Lys
>WENV180874308
ODLQ01000137
180071
Actinomycetota
CAT
Met
>WENV180874583
ODLQ01001839
221845
Actinomycetota
GAT
Ile
>WENV180874256
ODLQ01000071
481756
Actinomycetota
TCC
Gly
>WENV180874295
ODLQ01000115
285877
Actinomycetota
CCG
Arg
>WENV180875367
ODLQ01111360
399188
Actinomycetota
CAT
Met
>WENV180875368
ODLQ01111360
287437
Actinomycetota
CCA
Trp
>WENV180874894
ODLQ01009877
187640
Actinomycetota
TGT
Thr
>WENV180874489
ODLQ01000806
180945
Actinomycetota
CAT
Met
>WENV180875164
ODLQ01041114
423412
Actinomycetota
GAC
Val
>WENV180874803
ODLQ01006736
284887
Actinomycetota
GCC
Gly
>WENV180874187
ODLQ01000023
284887
Actinomycetota
GCC
Gly
>WENV180875340
ODLQ01098901
434601
Actinomycetota
GAC
Val
>WENV180874339
ODLQ01000218
292678
Actinomycetota
CTT
Lys
>WENV180874338
ODLQ01000218
292678
Actinomycetota
CTT
Lys
>WENV180875409
ODLQ01141417
47028
Actinomycetota
GGA
Ser
>WENV180874623
ODLQ01002294
297606
Actinomycetota
CCT
Arg
>WENV180874713
ODLQ01004450
371116
Actinomycetota
GGC
Ala
>WENV180874669
ODLQ01003105
371116
Actinomycetota
GGC
Ala
>WENV180874297
ODLQ01000125
371116
Actinomycetota
GGC
Ala
>WENV180874958
ODLQ01015903
482493
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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