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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181149976
OEHW01000159
184065
Actinomycetota
TGG
Pro
>WENV181151214
OEHW01027689
184065
Actinomycetota
TGG
Pro
>WENV181150439
OEHW01002667
194706
Actinomycetota
CAT
Met
>WENV181151290
OEHW01034694
284890
Actinomycetota
CTT
Lys
>WENV181151691
OEHW01099672
284890
Actinomycetota
CTT
Lys
>WENV181151400
OEHW01048810
284889
Actinomycetota
CTC
Glu
>WENV181150493
OEHW01003052
184493
Actinomycetota
GGG
Pro
>WENV181150956
OEHW01012557
184493
Actinomycetota
GGG
Pro
>WENV181151187
OEHW01025494
184493
Actinomycetota
GGG
Pro
>WENV181151811
OEHW01149218
443526
Actinomycetota
CAC
Val
>WENV181150239
OEHW01001126
285880
Actinomycetota
TCT
Arg
>WENV181151288
OEHW01034367
292656
Actinomycetota
ACG
Arg
>WENV181150964
OEHW01013033
180944
Actinomycetota
GTC
Asp
>WENV181151656
OEHW01090227
281239
Actinomycetota
TTT
Lys
>WENV181150203
OEHW01000869
507958
Actinomycetota
CCC
Gly
>WENV181150707
OEHW01005537
287251
Actinomycetota
CTT
Lys
>WENV181151597
OEHW01080840
180071
Actinomycetota
CAT
Met
>WENV181150348
OEHW01001713
221845
Actinomycetota
GAT
Ile
>WENV181149975
OEHW01000159
481756
Actinomycetota
TCC
Gly
>WENV181151158
OEHW01023578
290430
Actinomycetota
TCT
Arg
>WENV181150528
OEHW01003314
285877
Actinomycetota
CCG
Arg
>WENV181151025
OEHW01016321
187640
Actinomycetota
TGT
Thr
>WENV181151810
OEHW01149218
512744
Actinomycetota
GCA
Cys
>WENV181150952
OEHW01012357
180945
Actinomycetota
CAT
Met
>WENV181151498
OEHW01060952
284887
Actinomycetota
GCC
Gly
>WENV181151012
OEHW01015492
292678
Actinomycetota
CTT
Lys
>WENV181151011
OEHW01015492
292678
Actinomycetota
CTT
Lys
>WENV181150009
OEHW01000210
297606
Actinomycetota
CCT
Arg
>WENV181151027
OEHW01016436
371116
Actinomycetota
GGC
Ala
>WENV181151216
OEHW01027767
442299
Actinomycetota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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