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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181153601
OEIA01158839
178781
Betaproteobacteria
TCT
Arg
>WENV181152473
OEIA01001677
187637
Betaproteobacteria
>WENV181152204
OEIA01000375
400529
Betaproteobacteria
CCT
Arg
>WENV181152569
OEIA01002686
100191
Betaproteobacteria
GAG
Leu
>WENV181152937
OEIA01011356
183991
Betaproteobacteria
>WENV181152719
OEIA01004760
20442
Betaproteobacteria
GGA
Ser
>WENV181152954
OEIA01011792
20442
Betaproteobacteria
GGA
Ser
>WENV181153486
OEIA01099128
280601
Betaproteobacteria
TTG
Gln
>WENV181152999
OEIA01013583
280601
Betaproteobacteria
TTG
Gln
>WENV181152557
OEIA01002459
280601
Betaproteobacteria
TTG
Gln
>WENV181152485
OEIA01001757
280601
Betaproteobacteria
TTG
Gln
>WENV181152367
OEIA01001052
77402
Betaproteobacteria
CAG
Leu
>WENV181152492
OEIA01001795
77402
Betaproteobacteria
CAG
Leu
>WENV181152471
OEIA01001677
240095
Betaproteobacteria
TTG
Gln
>WENV181152472
OEIA01001677
240095
Betaproteobacteria
TTG
Gln
>WENV181152449
OEIA01001519
480893
Betaproteobacteria
GCA
Cys
>WENV181153504
OEIA01102640
452715
Betaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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