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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181157641
OEIG01018666
200563
Bacillota
TGG
Pro
>WENV181157772
OEIG01031710
288834
Bacillota
TAC
Val
>WENV181157840
OEIG01037767
288834
Bacillota
TAC
Val
>WENV181157951
OEIG01062213
288834
Bacillota
TAC
Val
>WENV181157173
OEIG01000653
283303
Bacillota
GTC
Asp
>WENV181157379
OEIG01003016
283303
Bacillota
GTC
Asp
>WENV181157824
OEIG01036392
283303
Bacillota
GTC
Asp
>WENV181157778
OEIG01031710
212982
Bacillota
ACG
Arg
>WENV181157860
OEIG01039375
280500
Bacillota
TGC
Ala
>WENV181157909
OEIG01050063
289121
Bacillota
CCA
Trp
>WENV181157855
OEIG01038864
184537
Bacillota
ACG
Arg
>WENV181157961
OEIG01067258
221826
Bacillota
ACG
Arg
>WENV181157403
OEIG01003692
408526
Bacillota
GCA
Cys
>WENV181157868
OEIG01040949
296855
Bacillota
GGT
Thr
>WENV181158105
OEIG01140143
287508
Bacillota
GTG
His
>WENV181157977
OEIG01070590
48505
Bacillota
TGA
Ser
>WENV181157786
OEIG01032098
48505
Bacillota
TGA
Ser
>WENV181157648
OEIG01018666
418726
Bacillota
TGT
Thr
>WENV181157407
OEIG01003822
289717
Bacillota
CTT
Lys
>WENV181157367
OEIG01002789
20932
Bacillota
GCT
Ser
>WENV181158133
OEIG01166659
291553
Bacillota
GAA
Phe
>WENV181157401
OEIG01003692
291553
Bacillota
GAA
Phe
>WENV181157515
OEIG01009002
283622
Bacillota
CTT
Lys
>WENV181158108
OEIG01141691
295166
Bacillota
TGC
Ala
>WENV181157699
OEIG01021745
482593
Bacillota
CCC
Gly
>WENV181157937
OEIG01056614
176014
Bacillota
TCT
Arg
>WENV181158145
OEIG01178215
339995
Bacillota
TGC
Ala
>WENV181157935
OEIG01056340
339995
Bacillota
TGC
Ala
>WENV181157466
OEIG01006907
339995
Bacillota
TGC
Ala
>WENV181157590
OEIG01013548
20942
Bacillota
GGA
Ser
>WENV181157206
OEIG01000813
20942
Bacillota
GGA
Ser
>WENV181157468
OEIG01006959
409321
Bacillota
TTC
Glu
>WENV181157578
OEIG01012220
100696
Bacillota
GTA
Tyr
>WENV181157579
OEIG01012220
187458
Bacillota
CAT
Met
>WENV181157470
OEIG01006959
338033
Bacillota
GAA
Phe
>WENV181157644
OEIG01018666
453914
Bacillota
GTT
Asn
>WENV181157701
OEIG01022213
356355
Bacillota
CAT
Met
>WENV181157452
OEIG01006182
141202
Bacillota
CAA
Leu
>WENV181157865
OEIG01040949
332181
Bacillota
TGT
Thr
>WENV181157249
OEIG01001193
143768
Bacillota
GTA
Tyr
>WENV181157647
OEIG01018666
195133
Bacillota
GTC
Asp
>WENV181157614
OEIG01015141
183957
Bacillota
CCT
Arg
>WENV181157489
OEIG01007966
156730
Bacillota
ACG
Arg
>WENV181158041
OEIG01102875
404091
Bacillota
TTG
Gln
>WENV181157557
OEIG01011171
110240
Bacillota
GAG
Leu
>WENV181158040
OEIG01102875
289716
Bacillota
GTG
His
>WENV181157526
OEIG01009551
432453
Bacillota
TTC
Glu
>WENV181157073
OEIG01000320
480337
Bacillota
TCC
Gly
>WENV181158051
OEIG01105378
301649
Bacillota
TTT
Lys
>WENV181157843
OEIG01037767
301649
Bacillota
TTT
Lys
>WENV181157774
OEIG01031710
301649
Bacillota
TTT
Lys
>WENV181157469
OEIG01006959
179935
Bacillota
GTC
Asp
>WENV181157337
OEIG01002419
119459
Bacillota
TAG
Leu
>WENV181157246
OEIG01001162
119459
Bacillota
TAG
Leu
>WENV181157241
OEIG01001026
119459
Bacillota
TAG
Leu
>WENV181157471
OEIG01006965
104114
Bacillota
CAG
Leu
>WENV181158150
OEIG01181599
280547
Bacillota
GTC
Asp
>WENV181157400
OEIG01003692
280547
Bacillota
GTC
Asp
>WENV181158137
OEIG01169101
445407
Bacillota
GCC
Gly
>WENV181157402
OEIG01003692
445407
Bacillota
GCC
Gly
>WENV181157283
OEIG01001420
445407
Bacillota
GCC
Gly
>WENV181157939
OEIG01056614
289154
Bacillota
CTT
Lys
>WENV181158153
OEIG01181994
289761
Bacillota
TTT
Lys
>WENV181157996
OEIG01079511
403759
Bacillota
CTC
Glu
>WENV181157861
OEIG01039449
283367
Bacillota
GCC
Gly
>WENV181157678
OEIG01020518
280561
Bacillota
CAT
Met
>WENV181157527
OEIG01009551
289715
Bacillota
TAC
Val
>WENV181157317
OEIG01001922
20943
Bacillota
CGA
Ser
>WENV181157952
OEIG01062213
141141
Bacillota
GTA
Tyr
>WENV181157841
OEIG01037767
141141
Bacillota
GTA
Tyr
>WENV181157176
OEIG01000653
141141
Bacillota
GTA
Tyr
>WENV181157688
OEIG01021341
444984
Bacillota
GCC
Gly
>WENV181157072
OEIG01000320
208539
Bacillota
TGG
Pro
>WENV181157074
OEIG01000320
184539
Bacillota
TCT
Arg
>WENV181157650
OEIG01018666
141617
Bacillota
TAG
Leu
>WENV181157556
OEIG01011171
100945
Bacillota
CAG
Leu
>WENV181157721
OEIG01024309
280486
Bacillota
TGC
Ala
>WENV181157949
OEIG01062213
178610
Bacillota
GTT
Asn
>WENV181157838
OEIG01037767
178610
Bacillota
GTT
Asn
>WENV181157821
OEIG01036392
178610
Bacillota
GTT
Asn
>WENV181157631
OEIG01017615
178610
Bacillota
GTT
Asn
>WENV181157376
OEIG01003016
178610
Bacillota
GTT
Asn
>WENV181157637
OEIG01018192
482078
Bacillota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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