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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181212265
OFBN01002912
288717
Actinomycetota
CGT
Thr
>WENV181212208
OFBN01000089
280978
Actinomycetota
CGT
Thr
>WENV181212247
OFBN01001170
180097
Actinomycetota
CAA
Leu
>WENV181212268
OFBN01003486
180084
Actinomycetota
CAT
Met
>WENV181212244
OFBN01000830
58082
Actinomycetota
TGA
Ser
>WENV181212236
OFBN01000539
302404
Actinomycetota
CCT
Arg
>WENV181212200
OFBN01000039
284287
Actinomycetota
GAA
Phe
>WENV181212246
OFBN01001083
284896
Actinomycetota
CTC
Glu
>WENV181212248
OFBN01001171
281035
Actinomycetota
GTT
Asn
>WENV181212197
OFBN01000039
280944
Actinomycetota
TTC
Glu
>WENV181212217
OFBN01000200
280740
Actinomycetota
GTG
His
>WENV181212252
OFBN01001370
280740
Actinomycetota
GTG
His
>WENV181212206
OFBN01000068
336201
Actinomycetota
TGT
Thr
>WENV181212198
OFBN01000039
202982
Actinomycetota
GTC
Asp
>WENV181212251
OFBN01001269
180096
Actinomycetota
GAT
Ile
>WENV181212227
OFBN01000343
117851
Actinomycetota
GTA
Tyr
>WENV181212192
OFBN01000013
4035
Actinomycetota
>WENV181212256
OFBN01001528
399101
Actinomycetota
CAC
Val
>WENV181212232
OFBN01000469
176352
Actinomycetota
GGG
Pro
>WENV181212239
OFBN01000599
403867
Actinomycetota
CTG
Gln
>WENV181212243
OFBN01000793
287476
Actinomycetota
CTT
Lys
>WENV181212219
OFBN01000212
187433
Actinomycetota
CCG
Arg
>WENV181212190
OFBN01000006
280982
Actinomycetota
CTT
Lys
>WENV181212241
OFBN01000694
184515
Actinomycetota
CAT
Met
>WENV181212249
OFBN01001171
219479
Actinomycetota
CAT
Met
>WENV181212266
OFBN01002954
503206
Actinomycetota
CCC
Gly
>WENV181212221
OFBN01000215
399099
Actinomycetota
>WENV181212257
OFBN01001821
180080
Actinomycetota
GGG
Pro
>WENV181212254
OFBN01001511
118332
Actinomycetota
TAG
Leu
>WENV181212235
OFBN01000529
46893
Actinomycetota
GAG
Leu
>WENV181212212
OFBN01000138
399188
Actinomycetota
CAT
Met
>WENV181212259
OFBN01002270
406233
Actinomycetota
CAC
Val
>WENV181212255
OFBN01001520
337841
Actinomycetota
CTC
Glu
>WENV181212193
OFBN01000014
481452
Actinomycetota
CCC
Gly
>WENV181212245
OFBN01001083
408668
Actinomycetota
CTG
Gln
>WENV181212264
OFBN01002807
214183
Actinomycetota
CGG
Pro
>WENV181212205
OFBN01000063
284288
Actinomycetota
TAC
Val
>WENV181212240
OFBN01000601
284289
Actinomycetota
CCT
Arg
>WENV181212225
OFBN01000248
47028
Actinomycetota
GGA
Ser
>WENV181212253
OFBN01001407
24826
Actinomycetota
CGA
Ser
>WENV181212230
OFBN01000436
120845
Actinomycetota
TAG
Leu
>WENV181212216
OFBN01000192
197533
Actinomycetota
CAT
Met
>WENV181212211
OFBN01000138
280979
Actinomycetota
GGT
Thr
>WENV181212238
OFBN01000545
421837
Actinomycetota
TCC
Gly
>WENV181212258
OFBN01001949
47775
Actinomycetota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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