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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181365265
OFPN01000003
31263
Betaproteobacteria
CGA
Ser
>WENV181365269
OFPN01000006
212101
Betaproteobacteria
GAT
Ile
>WENV181365277
OFPN01000013
281431
Betaproteobacteria
GTT
Asn
>WENV181365291
OFPN01000041
282942
Betaproteobacteria
CCG
Arg
>WENV181365295
OFPN01000051
211214
Betaproteobacteria
CAT
Met
>WENV181365299
OFPN01000056
187036
Betaproteobacteria
CAT
Met
>WENV181365272
OFPN01000010
282943
Betaproteobacteria
CTT
Lys
>WENV181365297
OFPN01000051
178289
Betaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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