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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181572604
OGJQ01020041
510477
Bacillota
TCC
Gly
>WENV181572314
OGJQ01001866
377363
Bacillota
GAA
Phe
>WENV181572324
OGJQ01001930
377363
Bacillota
GAA
Phe
>WENV181572310
OGJQ01001781
99852
Bacillota
GTA
Tyr
>WENV181572468
OGJQ01005442
343590
Bacillota
GCC
Gly
>WENV181572219
OGJQ01000973
480520
Bacillota
TCC
Gly
>WENV181572317
OGJQ01001888
480520
Bacillota
TCC
Gly
>WENV181572394
OGJQ01003114
480520
Bacillota
TCC
Gly
>WENV181572387
OGJQ01002973
405363
Bacillota
GCA
Cys
>WENV181572347
OGJQ01002439
444314
Bacillota
GTT
Asn
>WENV181572398
OGJQ01003240
280428
Bacillota
GAA
Phe
>WENV181572270
OGJQ01001353
229015
Bacillota
GTG
His
>WENV181572292
OGJQ01001525
175842
Bacillota
CAC
Val
>WENV181572457
OGJQ01005040
376224
Bacillota
TGG
Pro
>WENV181572238
OGJQ01001055
190476
Bacillota
CAT
Met
>WENV181572214
OGJQ01000933
73664
Bacillota
CAG
Leu
>WENV181572175
OGJQ01000653
280447
Bacillota
GAC
Val
>WENV181572101
OGJQ01000283
5692
Bacillota
GCT
Ser
>WENV181572399
OGJQ01003321
186123
Bacillota
GTC
Asp
>WENV181572093
OGJQ01000278
284723
Bacillota
TAC
Val
>WENV181572019
OGJQ01000102
73009
Bacillota
CAG
Leu
>WENV181572263
OGJQ01001289
399266
Bacillota
>WENV181572419
OGJQ01003737
399266
Bacillota
>WENV181571991
OGJQ01000059
291581
Bacillota
CGG
Pro
>WENV181572029
OGJQ01000128
175859
Bacillota
TCT
Arg
>WENV181572220
OGJQ01000973
330433
Bacillota
GTG
His
>WENV181572126
OGJQ01000382
175831
Bacillota
ACG
Arg
>WENV181572269
OGJQ01001353
179810
Bacillota
TCT
Arg
>WENV181572065
OGJQ01000209
284627
Bacillota
GAA
Phe
>WENV181572276
OGJQ01001365
27216
Bacillota
GCT
Ser
>WENV181572208
OGJQ01000889
27216
Bacillota
GCT
Ser
>WENV181572048
OGJQ01000177
480322
Bacillota
CTG
Gln
>WENV181571990
OGJQ01000059
480322
Bacillota
CTG
Gln
>WENV181572498
OGJQ01007393
399272
Bacillota
GCA
Cys
>WENV181572074
OGJQ01000224
175868
Bacillota
GTT
Asn
>WENV181572073
OGJQ01000224
398854
Bacillota
CTC
Glu
>WENV181572032
OGJQ01000135
291576
Bacillota
CCC
Gly
>WENV181572113
OGJQ01000325
497729
Bacillota
CCA
Trp
>WENV181572456
OGJQ01005009
323864
Bacillota
TGC
Ala
>WENV181572628
OGJQ01025998
292374
Bacillota
TGC
Ala
>WENV181572549
OGJQ01012171
204381
Bacillota
GAT
Ile
>WENV181572046
OGJQ01000166
280444
Bacillota
GGT
Thr
>WENV181572045
OGJQ01000166
280444
Bacillota
GGT
Thr
>WENV181572425
OGJQ01003831
354380
Bacillota
TTT
Lys
>WENV181572319
OGJQ01001888
354380
Bacillota
TTT
Lys
>WENV181572196
OGJQ01000797
179755
Bacillota
CCG
Arg
>WENV181572239
OGJQ01001055
398832
Bacillota
TTC
Glu
>WENV181572318
OGJQ01001888
203851
Bacillota
TCT
Arg
>WENV181572316
OGJQ01001888
449573
Bacillota
>WENV181572063
OGJQ01000209
118669
Bacillota
GTA
Tyr
>WENV181572328
OGJQ01002030
52748
Bacillota
TGA
Ser
>WENV181572627
OGJQ01025998
201856
Bacillota
GAT
Ile
>WENV181572635
OGJQ01028516
360353
Bacillota
CTT
Lys
>WENV181572395
OGJQ01003114
360353
Bacillota
CTT
Lys
>WENV181572491
OGJQ01006969
285601
Bacillota
TTC
Glu
>WENV181572055
OGJQ01000186
398833
Bacillota
TGT
Thr
>WENV181572044
OGJQ01000166
175849
Bacillota
GTC
Asp
>WENV181572414
OGJQ01003679
405393
Bacillota
GCC
Gly
>WENV181572100
OGJQ01000283
56074
Bacillota
TGA
Ser
>WENV181572210
OGJQ01000926
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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