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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
88 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181723575
OGPW01009391
481072
Bacillota
GCA
Cys
>WENV181723511
OGPW01008181
13336
Bacillota
CGA
Ser
>WENV181723130
OGPW01001744
404076
Bacillota
GCC
Gly
>WENV181723658
OGPW01012895
349107
Bacillota
GCC
Gly
>WENV181723128
OGPW01001744
184504
Bacillota
GTC
Asp
>WENV181723262
OGPW01003011
290391
Bacillota
TAC
Val
>WENV181722831
OGPW01000409
290391
Bacillota
TAC
Val
>WENV181723763
OGPW01021112
280428
Bacillota
GAA
Phe
>WENV181723945
OGPW01064116
179709
Bacillota
ACG
Arg
>WENV181723835
OGPW01031285
412083
Bacillota
GTT
Asn
>WENV181723659
OGPW01012923
178666
Bacillota
GAT
Ile
>WENV181723788
OGPW01024894
400468
Bacillota
CTC
Glu
>WENV181723577
OGPW01009446
175842
Bacillota
CAC
Val
>WENV181722647
OGPW01000116
348419
Bacillota
GTT
Asn
>WENV181723067
OGPW01001330
184497
Bacillota
GGG
Pro
>WENV181722886
OGPW01000527
184497
Bacillota
GGG
Pro
>WENV181722814
OGPW01000391
184497
Bacillota
GGG
Pro
>WENV181723789
OGPW01024894
283423
Bacillota
CTG
Gln
>WENV181723805
OGPW01026501
398915
Bacillota
TTC
Glu
>WENV181723336
OGPW01004170
179176
Bacillota
ACG
Arg
>WENV181722876
OGPW01000510
179176
Bacillota
ACG
Arg
>WENV181723930
OGPW01057421
184687
Bacillota
CAT
Met
>WENV181722789
OGPW01000356
295166
Bacillota
TGC
Ala
>WENV181723041
OGPW01001182
404079
Bacillota
CAT
Met
>WENV181723034
OGPW01001142
190476
Bacillota
CAT
Met
>WENV181723146
OGPW01001897
20428
Bacillota
GCT
Ser
>WENV181723351
OGPW01004340
283418
Bacillota
CTT
Lys
>WENV181723801
OGPW01026067
156266
Bacillota
CCT
Arg
>WENV181723794
OGPW01025498
283419
Bacillota
GGT
Thr
>WENV181723045
OGPW01001198
481217
Bacillota
GCA
Cys
>WENV181723456
OGPW01006541
400469
Bacillota
CCG
Arg
>WENV181723623
OGPW01011042
291581
Bacillota
CGG
Pro
>WENV181723739
OGPW01018977
175859
Bacillota
TCT
Arg
>WENV181723380
OGPW01005047
21311
Bacillota
GCT
Ser
>WENV181723791
OGPW01025189
175831
Bacillota
ACG
Arg
>WENV181723870
OGPW01037429
353153
Bacillota
TGC
Ala
>WENV181723792
OGPW01025296
46805
Bacillota
>WENV181723488
OGPW01006969
297381
Bacillota
TAC
Val
>WENV181723292
OGPW01003389
183957
Bacillota
CCT
Arg
>WENV181723366
OGPW01004763
283417
Bacillota
AGT
Thr
>WENV181723694
OGPW01014026
409171
Bacillota
TGT
Thr
>WENV181722975
OGPW01000883
482449
Bacillota
TCC
Gly
>WENV181723622
OGPW01011042
480322
Bacillota
CTG
Gln
>WENV181722807
OGPW01000380
401685
Bacillota
TTG
Gln
>WENV181723756
OGPW01020610
175868
Bacillota
GTT
Asn
>WENV181723397
OGPW01005542
322848
Bacillota
CTT
Lys
>WENV181723396
OGPW01005542
398854
Bacillota
CTC
Glu
>WENV181723633
OGPW01011544
418607
Bacillota
TTC
Glu
>WENV181723165
OGPW01002024
497729
Bacillota
CCA
Trp
>WENV181722700
OGPW01000157
497729
Bacillota
CCA
Trp
>WENV181722830
OGPW01000409
180688
Bacillota
GTC
Asp
>WENV181722988
OGPW01000926
303718
Bacillota
TGT
Thr
>WENV181723685
OGPW01013775
283420
Bacillota
GTT
Asn
>WENV181723496
OGPW01007484
56079
Bacillota
AAG
Leu
>WENV181723676
OGPW01013474
323864
Bacillota
TGC
Ala
>WENV181723647
OGPW01012273
175911
Bacillota
GTC
Asp
>WENV181723807
OGPW01026501
352154
Bacillota
TAC
Val
>WENV181723798
OGPW01025779
292374
Bacillota
TGC
Ala
>WENV181722648
OGPW01000116
398857
Bacillota
TTC
Glu
>WENV181723850
OGPW01034645
117745
Bacillota
GTA
Tyr
>WENV181723500
OGPW01007675
280444
Bacillota
GGT
Thr
>WENV181722744
OGPW01000261
317482
Bacillota
TAC
Val
>WENV181723573
OGPW01009391
480918
Bacillota
>WENV181723802
OGPW01026219
291597
Bacillota
TGC
Ala
>WENV181723285
OGPW01003280
73531
Bacillota
CAG
Leu
>WENV181723889
OGPW01042061
179755
Bacillota
CCG
Arg
>WENV181722881
OGPW01000520
58120
Bacillota
AAG
Leu
>WENV181722828
OGPW01000404
58120
Bacillota
AAG
Leu
>WENV181723565
OGPW01009160
46835
Bacillota
TAA
Leu
>WENV181723040
OGPW01001176
330413
Bacillota
CTT
Lys
>WENV181723035
OGPW01001142
398832
Bacillota
TTC
Glu
>WENV181722956
OGPW01000822
25955
Bacillota
GCT
Ser
>WENV181722934
OGPW01000756
280476
Bacillota
TTT
Lys
>WENV181722798
OGPW01000377
280476
Bacillota
TTT
Lys
>WENV181722796
OGPW01000377
280476
Bacillota
TTT
Lys
>WENV181723734
OGPW01018150
398852
Bacillota
CTC
Glu
>WENV181722808
OGPW01000380
309916
Bacillota
TTT
Lys
>WENV181723797
OGPW01025779
201856
Bacillota
GAT
Ile
>WENV181723574
OGPW01009391
283422
Bacillota
GTG
His
>WENV181723514
OGPW01008229
280483
Bacillota
GAA
Phe
>WENV181722806
OGPW01000380
175857
Bacillota
GTG
His
>WENV181723515
OGPW01008229
285756
Bacillota
GCC
Gly
>WENV181723450
OGPW01006414
400470
Bacillota
TTG
Gln
>WENV181723853
OGPW01035450
398833
Bacillota
TGT
Thr
>WENV181722832
OGPW01000409
285556
Bacillota
TGT
Thr
>WENV181723572
OGPW01009391
118245
Bacillota
GTA
Tyr
>WENV181723931
OGPW01057763
280486
Bacillota
TGC
Ala
>WENV181723882
OGPW01040606
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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