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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181821258
OGUE01000165
280870
Bacillota
TGC
Ala
>WENV181821280
OGUE01000275
280870
Bacillota
TGC
Ala
>WENV181821354
OGUE01000817
280870
Bacillota
TGC
Ala
>WENV181821459
OGUE01005237
480520
Bacillota
TCC
Gly
>WENV181821496
OGUE01008662
480520
Bacillota
TCC
Gly
>WENV181821500
OGUE01008662
487828
Bacillota
TCC
Gly
>WENV181821282
OGUE01000289
281017
Bacillota
GAA
Phe
>WENV181821392
OGUE01001559
281017
Bacillota
GAA
Phe
>WENV181821412
OGUE01002308
281017
Bacillota
GAA
Phe
>WENV181821340
OGUE01000685
280639
Bacillota
TTT
Lys
>WENV181821307
OGUE01000436
289717
Bacillota
CTT
Lys
>WENV181821177
OGUE01000018
20274
Bacillota
GCT
Ser
>WENV181821233
OGUE01000113
46686
Bacillota
TAA
Leu
>WENV181821236
OGUE01000113
46686
Bacillota
TAA
Leu
>WENV181821239
OGUE01000113
46686
Bacillota
TAA
Leu
>WENV181821260
OGUE01000170
141334
Bacillota
TAG
Leu
>WENV181821330
OGUE01000583
141334
Bacillota
TAG
Leu
>WENV181821336
OGUE01000673
291558
Bacillota
CTT
Lys
>WENV181821262
OGUE01000170
291558
Bacillota
CTT
Lys
>WENV181821329
OGUE01000583
283502
Bacillota
TTT
Lys
>WENV181821240
OGUE01000113
399266
Bacillota
>WENV181821421
OGUE01002833
283292
Bacillota
GAA
Phe
>WENV181821188
OGUE01000031
399041
Bacillota
CCA
Trp
>WENV181821187
OGUE01000031
399041
Bacillota
CCA
Trp
>WENV181821327
OGUE01000583
281302
Bacillota
GTG
His
>WENV181821179
OGUE01000019
399272
Bacillota
GCA
Cys
>WENV181821401
OGUE01001749
323864
Bacillota
TGC
Ala
>WENV181821326
OGUE01000583
182384
Bacillota
TCT
Arg
>WENV181821497
OGUE01008662
182384
Bacillota
TCT
Arg
>WENV181821383
OGUE01001343
281076
Bacillota
CCA
Trp
>WENV181821433
OGUE01003270
401835
Bacillota
GCA
Cys
>WENV181821493
OGUE01008166
320075
Bacillota
GAA
Phe
>WENV181821283
OGUE01000289
484342
Bacillota
GCA
Cys
>WENV181821325
OGUE01000583
328987
Bacillota
TGG
Pro
>WENV181821393
OGUE01001559
328987
Bacillota
TGG
Pro
>WENV181821498
OGUE01008662
328987
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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