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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181835341
OGVI01000018
212101
Betaproteobacteria
GAT
Ile
>WENV181835594
OGVI01005092
212101
Betaproteobacteria
GAT
Ile
>WENV181835484
OGVI01001584
282862
Betaproteobacteria
TGC
Ala
>WENV181835478
OGVI01001402
283006
Betaproteobacteria
GCC
Gly
>WENV181835558
OGVI01003352
117806
Betaproteobacteria
GTA
Tyr
>WENV181835411
OGVI01000243
178217
Betaproteobacteria
TTG
Gln
>WENV181835683
OGVI01009711
180113
Betaproteobacteria
TCT
Arg
>WENV181835657
OGVI01008207
400381
Betaproteobacteria
CCT
Arg
>WENV181835648
OGVI01007666
292271
Betaproteobacteria
TGT
Thr
>WENV181835508
OGVI01001965
180114
Betaproteobacteria
CAT
Met
>WENV181835956
OGVI01042442
180114
Betaproteobacteria
CAT
Met
>WENV181835495
OGVI01001668
329025
Betaproteobacteria
TTT
Lys
>WENV181835547
OGVI01002977
186768
Betaproteobacteria
>WENV181835926
OGVI01038524
20603
Betaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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