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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182132952
OHKF01004706
377363
Bacillota
GAA
Phe
>WENV182132815
OHKF01001478
343590
Bacillota
GCC
Gly
>WENV182133147
OHKF01021768
280500
Bacillota
TGC
Ala
>WENV182132879
OHKF01002550
349107
Bacillota
GCC
Gly
>WENV182132834
OHKF01001889
480520
Bacillota
TCC
Gly
>WENV182132880
OHKF01002550
405363
Bacillota
GCA
Cys
>WENV182132878
OHKF01002550
280428
Bacillota
GAA
Phe
>WENV182133075
OHKF01012160
280492
Bacillota
CTT
Lys
>WENV182132649
OHKF01000294
175842
Bacillota
CAC
Val
>WENV182133012
OHKF01007388
376224
Bacillota
TGG
Pro
>WENV182132994
OHKF01006477
179563
Bacillota
GAT
Ile
>WENV182132993
OHKF01006477
295166
Bacillota
TGC
Ala
>WENV182133102
OHKF01015588
141334
Bacillota
TAG
Leu
>WENV182132776
OHKF01001010
190476
Bacillota
CAT
Met
>WENV182132987
OHKF01006164
441615
Bacillota
GTT
Asn
>WENV182132964
OHKF01004980
73664
Bacillota
CAG
Leu
>WENV182132924
OHKF01003557
280447
Bacillota
GAC
Val
>WENV182132768
OHKF01000937
280447
Bacillota
GAC
Val
>WENV182132990
OHKF01006310
5692
Bacillota
GCT
Ser
>WENV182132744
OHKF01000815
291558
Bacillota
CTT
Lys
>WENV182132854
OHKF01002209
73009
Bacillota
CAG
Leu
>WENV182133166
OHKF01026150
280646
Bacillota
TGC
Ala
>WENV182132714
OHKF01000577
291581
Bacillota
CGG
Pro
>WENV182132828
OHKF01001772
175859
Bacillota
TCT
Arg
>WENV182132837
OHKF01001889
330433
Bacillota
GTG
His
>WENV182132741
OHKF01000761
175831
Bacillota
ACG
Arg
>WENV182132635
OHKF01000217
510876
Bacillota
GGT
Thr
>WENV182132775
OHKF01000994
399041
Bacillota
CCA
Trp
>WENV182133115
OHKF01017244
137739
Bacillota
TAG
Leu
>WENV182132713
OHKF01000577
480322
Bacillota
CTG
Gln
>WENV182133050
OHKF01010056
141533
Bacillota
CAA
Leu
>WENV182133089
OHKF01013274
175868
Bacillota
GTT
Asn
>WENV182132858
OHKF01002252
398854
Bacillota
CTC
Glu
>WENV182132937
OHKF01003974
291576
Bacillota
CCC
Gly
>WENV182132850
OHKF01002151
480324
Bacillota
TTG
Gln
>WENV182133097
OHKF01014298
497729
Bacillota
CCA
Trp
>WENV182133061
OHKF01011424
303718
Bacillota
TGT
Thr
>WENV182132963
OHKF01004922
186051
Bacillota
GAT
Ile
>WENV182132787
OHKF01001169
280444
Bacillota
GGT
Thr
>WENV182132761
OHKF01000899
483485
Bacillota
CCC
Gly
>WENV182132917
OHKF01003420
117940
Bacillota
GTA
Tyr
>WENV182132839
OHKF01001889
354380
Bacillota
TTT
Lys
>WENV182132956
OHKF01004806
179755
Bacillota
CCG
Arg
>WENV182132864
OHKF01002301
46835
Bacillota
TAA
Leu
>WENV182132777
OHKF01001010
398832
Bacillota
TTC
Glu
>WENV182132835
OHKF01001889
203851
Bacillota
TCT
Arg
>WENV182132948
OHKF01004500
449573
Bacillota
>WENV182132863
OHKF01002301
118669
Bacillota
GTA
Tyr
>WENV182132683
OHKF01000475
118669
Bacillota
GTA
Tyr
>WENV182132812
OHKF01001467
398852
Bacillota
CTC
Glu
>WENV182132803
OHKF01001351
398833
Bacillota
TGT
Thr
>WENV182133007
OHKF01007118
288989
Bacillota
TAC
Val
>WENV182133124
OHKF01017245
280486
Bacillota
TGC
Ala
>WENV182132989
OHKF01006310
56074
Bacillota
TGA
Ser
>WENV182132907
OHKF01002956
280473
Bacillota
TGG
Pro
>WENV182132882
OHKF01002590
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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