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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182185623
OHOG01000045
57121
Bacillota
GGA
Ser
>WENV182185660
OHOG01000425
176033
Bacillota
CAT
Met
>WENV182185625
OHOG01000110
400904
Bacillota
CCT
Arg
>WENV182185618
OHOG01000010
13634
Bacillota
CGA
Ser
>WENV182185665
OHOG01000425
179563
Bacillota
GAT
Ile
>WENV182185668
OHOG01000571
400905
Bacillota
CCG
Arg
>WENV182185662
OHOG01000425
184171
Bacillota
CAT
Met
>WENV182185657
OHOG01000425
179130
Bacillota
ACG
Arg
>WENV182185622
OHOG01000017
284389
Bacillota
CTT
Lys
>WENV182185635
OHOG01000230
284390
Bacillota
CGT
Thr
>WENV182185621
OHOG01000011
480366
Bacillota
GGT
Thr
>WENV182185656
OHOG01000425
47847
Bacillota
TAA
Leu
>WENV182185652
OHOG01000425
284680
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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