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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182425922
OIHN01000263
118683
Bacillota
GTA
Tyr
>WENV182425962
OIHN01000630
184537
Bacillota
ACG
Arg
>WENV182425876
OIHN01000008
408526
Bacillota
GCA
Cys
>WENV182425870
OIHN01000003
356660
Bacillota
CTT
Lys
>WENV182426065
OIHN01004369
296855
Bacillota
GGT
Thr
>WENV182425898
OIHN01000034
48505
Bacillota
TGA
Ser
>WENV182425907
OIHN01000082
289717
Bacillota
CTT
Lys
>WENV182425888
OIHN01000011
400140
Bacillota
TTC
Glu
>WENV182425917
OIHN01000155
20932
Bacillota
GCT
Ser
>WENV182426051
OIHN01003216
482593
Bacillota
CCC
Gly
>WENV182426040
OIHN01002727
339995
Bacillota
TGC
Ala
>WENV182426138
OIHN01013839
13376
Bacillota
CGA
Ser
>WENV182426157
OIHN01017755
460732
Bacillota
TTC
Glu
>WENV182426134
OIHN01012053
407726
Bacillota
CTG
Gln
>WENV182426066
OIHN01004369
184495
Bacillota
CAT
Met
>WENV182425906
OIHN01000073
141202
Bacillota
CAA
Leu
>WENV182426054
OIHN01003536
510876
Bacillota
GGT
Thr
>WENV182426128
OIHN01011564
293309
Bacillota
GTT
Asn
>WENV182426116
OIHN01010107
293309
Bacillota
GTT
Asn
>WENV182426062
OIHN01004369
289713
Bacillota
TGT
Thr
>WENV182426161
OIHN01018154
404091
Bacillota
TTG
Gln
>WENV182426160
OIHN01018154
289716
Bacillota
GTG
His
>WENV182425967
OIHN01000690
497729
Bacillota
CCA
Trp
>WENV182426125
OIHN01011090
73638
Bacillota
AAG
Leu
>WENV182425879
OIHN01000011
53200
Bacillota
TAA
Leu
>WENV182426110
OIHN01008301
175911
Bacillota
GTC
Asp
>WENV182425902
OIHN01000046
480337
Bacillota
TCC
Gly
>WENV182426008
OIHN01001631
292374
Bacillota
TGC
Ala
>WENV182426119
OIHN01010446
398857
Bacillota
TTC
Glu
>WENV182426004
OIHN01001517
204381
Bacillota
GAT
Ile
>WENV182425963
OIHN01000630
119459
Bacillota
TAG
Leu
>WENV182425875
OIHN01000008
445407
Bacillota
GCC
Gly
>WENV182426152
OIHN01016396
46835
Bacillota
TAA
Leu
>WENV182426136
OIHN01013590
319040
Bacillota
GCC
Gly
>WENV182425900
OIHN01000046
20943
Bacillota
CGA
Ser
>WENV182425887
OIHN01000011
8724
Bacillota
GCT
Ser
>WENV182426007
OIHN01001631
201856
Bacillota
GAT
Ile
>WENV182426077
OIHN01004859
118370
Bacillota
TAG
Leu
>WENV182425901
OIHN01000046
208539
Bacillota
TGG
Pro
>WENV182425903
OIHN01000046
184539
Bacillota
TCT
Arg
>WENV182425978
OIHN01000864
175857
Bacillota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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