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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
102 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182529763
OIWV01000043
510477
Bacillota
TCC
Gly
>WENV182530617
OIWV01004994
99852
Bacillota
GTA
Tyr
>WENV182530983
OIWV01020282
99852
Bacillota
GTA
Tyr
>WENV182529955
OIWV01000348
343590
Bacillota
GCC
Gly
>WENV182531148
OIWV01040613
280500
Bacillota
TGC
Ala
>WENV182530213
OIWV01001168
349107
Bacillota
GCC
Gly
>WENV182530402
OIWV01002373
349107
Bacillota
GCC
Gly
>WENV182530351
OIWV01002025
405363
Bacillota
GCA
Cys
>WENV182530401
OIWV01002373
280428
Bacillota
GAA
Phe
>WENV182530126
OIWV01000779
280492
Bacillota
CTT
Lys
>WENV182529883
OIWV01000183
280492
Bacillota
CTT
Lys
>WENV182530380
OIWV01002215
175842
Bacillota
CAC
Val
>WENV182530615
OIWV01004962
29930
Bacillota
GGA
Ser
>WENV182531278
OIWV01065598
4796
Bacillota
GGA
Ser
>WENV182531201
OIWV01049975
179563
Bacillota
GAT
Ile
>WENV182529891
OIWV01000202
184687
Bacillota
CAT
Met
>WENV182529828
OIWV01000102
295166
Bacillota
TGC
Ala
>WENV182530535
OIWV01003677
190476
Bacillota
CAT
Met
>WENV182530204
OIWV01001115
190476
Bacillota
CAT
Met
>WENV182530330
OIWV01001892
73664
Bacillota
CAG
Leu
>WENV182530285
OIWV01001550
73664
Bacillota
CAG
Leu
>WENV182530162
OIWV01000940
73664
Bacillota
CAG
Leu
>WENV182530343
OIWV01001994
280447
Bacillota
GAC
Val
>WENV182530655
OIWV01005947
5692
Bacillota
GCT
Ser
>WENV182530452
OIWV01002978
5692
Bacillota
GCT
Ser
>WENV182530228
OIWV01001248
5692
Bacillota
GCT
Ser
>WENV182529836
OIWV01000113
186123
Bacillota
GTC
Asp
>WENV182531091
OIWV01030134
175825
Bacillota
GAT
Ile
>WENV182529798
OIWV01000070
100696
Bacillota
GTA
Tyr
>WENV182530551
OIWV01003940
73009
Bacillota
CAG
Leu
>WENV182530425
OIWV01002581
73009
Bacillota
CAG
Leu
>WENV182530801
OIWV01009762
180666
Bacillota
GGT
Thr
>WENV182529799
OIWV01000070
187458
Bacillota
CAT
Met
>WENV182530945
OIWV01017200
189473
Bacillota
GAT
Ile
>WENV182530599
OIWV01004647
291581
Bacillota
CGG
Pro
>WENV182530378
OIWV01002199
291581
Bacillota
CGG
Pro
>WENV182530182
OIWV01000998
291581
Bacillota
CGG
Pro
>WENV182530656
OIWV01005998
175859
Bacillota
TCT
Arg
>WENV182530359
OIWV01002057
175859
Bacillota
TCT
Arg
>WENV182530333
OIWV01001909
175859
Bacillota
TCT
Arg
>WENV182530242
OIWV01001330
175859
Bacillota
TCT
Arg
>WENV182531090
OIWV01030134
280436
Bacillota
TGC
Ala
>WENV182531106
OIWV01034506
21311
Bacillota
GCT
Ser
>WENV182530297
OIWV01001674
175831
Bacillota
ACG
Arg
>WENV182531200
OIWV01049975
353153
Bacillota
TGC
Ala
>WENV182530489
OIWV01003369
284627
Bacillota
GAA
Phe
>WENV182530031
OIWV01000440
284627
Bacillota
GAA
Phe
>WENV182529837
OIWV01000113
291634
Bacillota
GAA
Phe
>WENV182530033
OIWV01000443
346451
Bacillota
TTT
Lys
>WENV182530020
OIWV01000418
27216
Bacillota
GCT
Ser
>WENV182530598
OIWV01004647
480322
Bacillota
CTG
Gln
>WENV182530516
OIWV01003560
480322
Bacillota
CTG
Gln
>WENV182530377
OIWV01002199
480322
Bacillota
CTG
Gln
>WENV182530302
OIWV01001700
480322
Bacillota
CTG
Gln
>WENV182530181
OIWV01000998
480322
Bacillota
CTG
Gln
>WENV182530501
OIWV01003425
175868
Bacillota
GTT
Asn
>WENV182530485
OIWV01003329
175868
Bacillota
GTT
Asn
>WENV182530426
OIWV01002591
175868
Bacillota
GTT
Asn
>WENV182529959
OIWV01000361
287380
Bacillota
CTT
Lys
>WENV182530603
OIWV01004767
398854
Bacillota
CTC
Glu
>WENV182531029
OIWV01023650
291576
Bacillota
CCC
Gly
>WENV182530432
OIWV01002707
291576
Bacillota
CCC
Gly
>WENV182530069
OIWV01000585
291576
Bacillota
CCC
Gly
>WENV182530459
OIWV01003065
480324
Bacillota
TTG
Gln
>WENV182530292
OIWV01001639
480324
Bacillota
TTG
Gln
>WENV182530164
OIWV01000942
508151
Bacillota
GGT
Thr
>WENV182530171
OIWV01000952
497729
Bacillota
CCA
Trp
>WENV182531136
OIWV01037500
407858
Bacillota
GCC
Gly
>WENV182530588
OIWV01004428
56079
Bacillota
AAG
Leu
>WENV182530587
OIWV01004428
56079
Bacillota
AAG
Leu
>WENV182530434
OIWV01002736
404126
Bacillota
GCC
Gly
>WENV182531335
OIWV01079495
186051
Bacillota
GAT
Ile
>WENV182531150
OIWV01041857
398857
Bacillota
TTC
Glu
>WENV182530017
OIWV01000406
117745
Bacillota
GTA
Tyr
>WENV182530399
OIWV01002353
280444
Bacillota
GGT
Thr
>WENV182530309
OIWV01001709
280444
Bacillota
GGT
Thr
>WENV182531131
OIWV01037195
317482
Bacillota
TAC
Val
>WENV182530045
OIWV01000482
483485
Bacillota
CCC
Gly
>WENV182530688
OIWV01006588
179755
Bacillota
CCG
Arg
>WENV182530621
OIWV01005176
179755
Bacillota
CCG
Arg
>WENV182529969
OIWV01000372
284742
Bacillota
GAA
Phe
>WENV182530536
OIWV01003677
398832
Bacillota
TTC
Glu
>WENV182530205
OIWV01001115
398832
Bacillota
TTC
Glu
>WENV182530245
OIWV01001338
118669
Bacillota
GTA
Tyr
>WENV182531320
OIWV01075816
294275
Bacillota
TGC
Ala
>WENV182529914
OIWV01000248
280462
Bacillota
GAA
Phe
>WENV182530539
OIWV01003698
398852
Bacillota
CTC
Glu
>WENV182529960
OIWV01000362
398852
Bacillota
CTC
Glu
>WENV182529737
OIWV01000018
398852
Bacillota
CTC
Glu
>WENV182531322
OIWV01076087
201856
Bacillota
GAT
Ile
>WENV182529910
OIWV01000241
289123
Bacillota
GGT
Thr
>WENV182529764
OIWV01000043
184539
Bacillota
TCT
Arg
>WENV182530509
OIWV01003526
175857
Bacillota
GTG
His
>WENV182530548
OIWV01003906
398833
Bacillota
TGT
Thr
>WENV182530450
OIWV01002973
398833
Bacillota
TGT
Thr
>WENV182529979
OIWV01000386
100945
Bacillota
CAG
Leu
>WENV182529681
OIWV01000001
405393
Bacillota
GCC
Gly
>WENV182530654
OIWV01005947
56074
Bacillota
TGA
Ser
>WENV182530451
OIWV01002978
56074
Bacillota
TGA
Ser
>WENV182530227
OIWV01001248
56074
Bacillota
TGA
Ser
>WENV182530567
OIWV01004190
280473
Bacillota
TGG
Pro
>WENV182530407
OIWV01002449
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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