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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182572987
OJFO01013116
8575
Gammaproteobacteria
GCT
Ser
>WENV182572886
OJFO01000014
480941
Gammaproteobacteria
TCC
Gly
>WENV182572900
OJFO01000417
283221
Gammaproteobacteria
GCC
Gly
>WENV182572998
OJFO01016325
282687
Gammaproteobacteria
GCC
Gly
>WENV182572999
OJFO01016325
282687
Gammaproteobacteria
GCC
Gly
>WENV182573001
OJFO01016325
282687
Gammaproteobacteria
GCC
Gly
>WENV182572935
OJFO01004367
176796
Gammaproteobacteria
GGG
Pro
>WENV182572961
OJFO01008805
292194
Gammaproteobacteria
GGT
Thr
>WENV182572985
OJFO01012871
121740
Gammaproteobacteria
TAG
Leu
>WENV182572984
OJFO01012871
178472
Gammaproteobacteria
CAT
Met
>WENV182572949
OJFO01007590
178470
Gammaproteobacteria
ACG
Arg
>WENV182573004
OJFO01016676
229289
Gammaproteobacteria
TGG
Pro
>WENV182572940
OJFO01004933
209333
Gammaproteobacteria
TCT
Arg
>WENV182572924
OJFO01002876
281282
Gammaproteobacteria
TTC
Glu
>WENV182572986
OJFO01012871
441770
Gammaproteobacteria
TTG
Gln
>WENV182572901
OJFO01000417
481023
Gammaproteobacteria
GCA
Cys
>WENV182572976
OJFO01010820
292006
Gammaproteobacteria
TGC
Ala
>WENV182572991
OJFO01014564
281432
Gammaproteobacteria
TTG
Gln
>WENV182572893
OJFO01000212
338424
Gammaproteobacteria
TAC
Val
>WENV182572939
OJFO01004933
178473
Gammaproteobacteria
TGG
Pro
>WENV182572982
OJFO01012871
118206
Gammaproteobacteria
TAG
Leu
>WENV182572899
OJFO01000417
73481
Gammaproteobacteria
TAA
Leu
>WENV182572897
OJFO01000417
289386
Gammaproteobacteria
GCC
Gly
>WENV182572974
OJFO01010499
296761
Gammaproteobacteria
GGT
Thr
>WENV182572968
OJFO01009695
283225
Gammaproteobacteria
TGT
Thr
>WENV182572983
OJFO01012871
411344
Gammaproteobacteria
TTG
Gln
>WENV182572937
OJFO01004542
317792
Gammaproteobacteria
TGC
Ala
>WENV182572995
OJFO01014870
118273
Gammaproteobacteria
GAG
Leu
>WENV182572981
OJFO01012783
8605
Gammaproteobacteria
>WENV182572942
OJFO01004933
285547
Gammaproteobacteria
TTG
Gln
>WENV182572971
OJFO01009695
317785
Gammaproteobacteria
GGT
Thr
>WENV182572898
OJFO01000417
481250
Gammaproteobacteria
GCA
Cys
>WENV182572936
OJFO01004542
178468
Gammaproteobacteria
GAT
Ile
>WENV182572969
OJFO01009695
118205
Gammaproteobacteria
GTA
Tyr
>WENV182572941
OJFO01004933
118640
Gammaproteobacteria
TAG
Leu
>WENV182572880
OJFO01000008
282902
Gammaproteobacteria
TGT
Thr
>WENV182572947
OJFO01006496
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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