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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182574356
OJFR01006161
180052
Gammaproteobacteria
CCT
Arg
>WENV182574229
OJFR01000966
73123
Gammaproteobacteria
CAA
Leu
>WENV182574320
OJFR01004563
183804
Gammaproteobacteria
CAT
Met
>WENV182574333
OJFR01005005
21535
Gammaproteobacteria
GCT
Ser
>WENV182574235
OJFR01001049
281275
Gammaproteobacteria
TGT
Thr
>WENV182574172
OJFR01000372
20273
Gammaproteobacteria
TGA
Ser
>WENV182574080
OJFR01000003
20273
Gammaproteobacteria
TGA
Ser
>WENV182574492
OJFR01044189
314350
Gammaproteobacteria
CCA
Trp
>WENV182574318
OJFR01004372
180053
Gammaproteobacteria
CAT
Met
>WENV182574087
OJFR01000005
176662
Gammaproteobacteria
ACG
Arg
>WENV182574088
OJFR01000005
176662
Gammaproteobacteria
ACG
Arg
>WENV182574278
OJFR01001778
176662
Gammaproteobacteria
ACG
Arg
>WENV182574096
OJFR01000020
120827
Gammaproteobacteria
GAG
Leu
>WENV182574086
OJFR01000005
29834
Gammaproteobacteria
GCT
Ser
>WENV182574097
OJFR01000025
218635
Gammaproteobacteria
GAC
Val
>WENV182574237
OJFR01001049
399250
Gammaproteobacteria
TCC
Gly
>WENV182574248
OJFR01001281
140925
Gammaproteobacteria
GTA
Tyr
>WENV182574404
OJFR01012614
197551
Gammaproteobacteria
TCT
Arg
>WENV182574075
OJFR01000002
281282
Gammaproteobacteria
TTC
Glu
>WENV182574130
OJFR01000095
281282
Gammaproteobacteria
TTC
Glu
>WENV182574380
OJFR01008742
281282
Gammaproteobacteria
TTC
Glu
>WENV182574193
OJFR01000517
282550
Gammaproteobacteria
TAC
Val
>WENV182574157
OJFR01000237
329164
Gammaproteobacteria
TTT
Lys
>WENV182574156
OJFR01000230
176663
Gammaproteobacteria
GGG
Pro
>WENV182574090
OJFR01000007
176663
Gammaproteobacteria
GGG
Pro
>WENV182574330
OJFR01004929
297790
Gammaproteobacteria
TGC
Ala
>WENV182574309
OJFR01003176
480516
Gammaproteobacteria
GCA
Cys
>WENV182574100
OJFR01000031
480516
Gammaproteobacteria
GCA
Cys
>WENV182574236
OJFR01001049
126555
Gammaproteobacteria
GTA
Tyr
>WENV182574274
OJFR01001557
182472
Gammaproteobacteria
GTC
Asp
>WENV182574295
OJFR01002623
291402
Gammaproteobacteria
GTG
His
>WENV182574324
OJFR01004812
280812
Gammaproteobacteria
GAA
Phe
>WENV182574289
OJFR01002454
176661
Gammaproteobacteria
GAC
Val
>WENV182574240
OJFR01001080
176661
Gammaproteobacteria
GAC
Val
>WENV182574473
OJFR01034909
176545
Gammaproteobacteria
CAT
Met
>WENV182574439
OJFR01020952
56340
Gammaproteobacteria
GGA
Ser
>WENV182574429
OJFR01018926
401684
Gammaproteobacteria
CCT
Arg
>WENV182574350
OJFR01005485
181365
Gammaproteobacteria
CAT
Met
>WENV182574364
OJFR01006860
74048
Gammaproteobacteria
CAA
Leu
>WENV182574307
OJFR01003117
306288
Gammaproteobacteria
GCC
Gly
>WENV182574266
OJFR01001498
306288
Gammaproteobacteria
GCC
Gly
>WENV182574099
OJFR01000031
306288
Gammaproteobacteria
GCC
Gly
>WENV182574407
OJFR01013388
302111
Gammaproteobacteria
GTT
Asn
>WENV182574489
OJFR01042054
287558
Gammaproteobacteria
TTC
Glu
>WENV182574089
OJFR01000007
176664
Gammaproteobacteria
CCT
Arg
>WENV182574165
OJFR01000324
176664
Gammaproteobacteria
CCT
Arg
>WENV182574391
OJFR01009372
337925
Gammaproteobacteria
TGC
Ala
>WENV182574384
OJFR01008913
176544
Gammaproteobacteria
CAT
Met
>WENV182574390
OJFR01009372
176301
Gammaproteobacteria
GAT
Ile
>WENV182574413
OJFR01014351
317792
Gammaproteobacteria
TGC
Ala
>WENV182574202
OJFR01000686
56623
Gammaproteobacteria
GGA
Ser
>WENV182574331
OJFR01004967
180678
Gammaproteobacteria
CCG
Arg
>WENV182574125
OJFR01000087
176665
Gammaproteobacteria
CGG
Pro
>WENV182574082
OJFR01000004
176665
Gammaproteobacteria
CGG
Pro
>WENV182574178
OJFR01000464
402799
Gammaproteobacteria
TTG
Gln
>WENV182574406
OJFR01013006
180681
Gammaproteobacteria
TGG
Pro
>WENV182574098
OJFR01000031
23169
Gammaproteobacteria
GGA
Ser
>WENV182574238
OJFR01001049
296808
Gammaproteobacteria
GGT
Thr
>WENV182574078
OJFR01000002
281283
Gammaproteobacteria
GTG
His
>WENV182574450
OJFR01024299
118640
Gammaproteobacteria
TAG
Leu
>WENV182574151
OJFR01000176
176478
Gammaproteobacteria
CAT
Met
>WENV182574105
OJFR01000045
221659
Gammaproteobacteria
CAT
Met
>WENV182574506
OJFR01049904
401830
Gammaproteobacteria
TTG
Gln
>WENV182574247
OJFR01001281
282902
Gammaproteobacteria
TGT
Thr
>WENV182574449
OJFR01024299
190582
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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