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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182578810
OJGP01004483
331330
Gammaproteobacteria
TAC
Val
>WENV182578754
OJGP01001364
282684
Gammaproteobacteria
TTC
Glu
>WENV182578806
OJGP01004125
297858
Gammaproteobacteria
TGC
Ala
>WENV182578830
OJGP01005775
282687
Gammaproteobacteria
GCC
Gly
>WENV182578813
OJGP01004645
118078
Gammaproteobacteria
GTA
Tyr
>WENV182578864
OJGP01008901
285584
Gammaproteobacteria
TTT
Lys
>WENV182578801
OJGP01003609
180717
Gammaproteobacteria
CCA
Trp
>WENV182578820
OJGP01005218
178006
Gammaproteobacteria
GGG
Pro
>WENV182578795
OJGP01003394
210138
Gammaproteobacteria
TCT
Arg
>WENV182578773
OJGP01002246
135293
Gammaproteobacteria
GTA
Tyr
>WENV182578848
OJGP01006922
118920
Gammaproteobacteria
TAG
Leu
>WENV182578730
OJGP01000821
284115
Gammaproteobacteria
TAC
Val
>WENV182578847
OJGP01006922
180718
Gammaproteobacteria
CAT
Met
>WENV182578831
OJGP01005775
118082
Gammaproteobacteria
TAA
Leu
>WENV182578753
OJGP01001364
282683
Gammaproteobacteria
GGC
Ala
>WENV182578839
OJGP01006218
370389
Gammaproteobacteria
GGC
Ala
>WENV182578846
OJGP01006861
178004
Gammaproteobacteria
CCA
Trp
>WENV182578821
OJGP01005337
32355
Gammaproteobacteria
GGA
Ser
>WENV182578715
OJGP01000614
230011
Gammaproteobacteria
ACG
Arg
>WENV182578794
OJGP01003394
178009
Gammaproteobacteria
TGG
Pro
>WENV182578740
OJGP01000982
120800
Gammaproteobacteria
CAA
Leu
>WENV182578785
OJGP01003072
283486
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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