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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
100 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182783703
OJSG01000726
99852
Bacillota
GTA
Tyr
>WENV182783712
OJSG01000745
99852
Bacillota
GTA
Tyr
>WENV182784173
OJSG01023559
343590
Bacillota
GCC
Gly
>WENV182783770
OJSG01000980
405363
Bacillota
GCA
Cys
>WENV182783501
OJSG01000185
289472
Bacillota
TTC
Glu
>WENV182783848
OJSG01001814
280428
Bacillota
GAA
Phe
>WENV182783497
OJSG01000185
424998
Bacillota
GCC
Gly
>WENV182783438
OJSG01000121
424998
Bacillota
GCC
Gly
>WENV182783793
OJSG01001152
284746
Bacillota
CTG
Gln
>WENV182783586
OJSG01000335
183994
Bacillota
TCT
Arg
>WENV182783891
OJSG01002578
175842
Bacillota
CAC
Val
>WENV182783910
OJSG01002728
287289
Bacillota
GCC
Gly
>WENV182783767
OJSG01000967
287289
Bacillota
GCC
Gly
>WENV182783505
OJSG01000185
101000
Bacillota
GTA
Tyr
>WENV182784091
OJSG01012969
215243
Bacillota
CAT
Met
>WENV182784007
OJSG01006498
215243
Bacillota
CAT
Met
>WENV182783834
OJSG01001577
190476
Bacillota
CAT
Met
>WENV182783543
OJSG01000220
190476
Bacillota
CAT
Met
>WENV182783503
OJSG01000185
184522
Bacillota
CCT
Arg
>WENV182783639
OJSG01000462
280447
Bacillota
GAC
Val
>WENV182783757
OJSG01000913
280447
Bacillota
GAC
Val
>WENV182783745
OJSG01000863
5692
Bacillota
GCT
Ser
>WENV182783476
OJSG01000161
5692
Bacillota
GCT
Ser
>WENV182783655
OJSG01000538
47207
Bacillota
TGA
Ser
>WENV182783854
OJSG01001899
359682
Bacillota
TAC
Val
>WENV182783502
OJSG01000185
359682
Bacillota
TAC
Val
>WENV182784208
OJSG01029210
284723
Bacillota
TAC
Val
>WENV182783457
OJSG01000144
284723
Bacillota
TAC
Val
>WENV182783702
OJSG01000726
73009
Bacillota
CAG
Leu
>WENV182784008
OJSG01006498
460732
Bacillota
TTC
Glu
>WENV182783508
OJSG01000185
183993
Bacillota
CAT
Met
>WENV182784068
OJSG01010607
407726
Bacillota
CTG
Gln
>WENV182783789
OJSG01001149
291581
Bacillota
CGG
Pro
>WENV182783918
OJSG01003050
291581
Bacillota
CGG
Pro
>WENV182783965
OJSG01004276
175859
Bacillota
TCT
Arg
>WENV182783862
OJSG01002129
175859
Bacillota
TCT
Arg
>WENV182784001
OJSG01006135
398835
Bacillota
GCC
Gly
>WENV182783507
OJSG01000185
289149
Bacillota
GGT
Thr
>WENV182783693
OJSG01000676
175831
Bacillota
ACG
Arg
>WENV182783653
OJSG01000510
47166
Bacillota
CGA
Ser
>WENV182783498
OJSG01000185
289147
Bacillota
GTT
Asn
>WENV182783708
OJSG01000736
289475
Bacillota
GTG
His
>WENV182783700
OJSG01000723
241041
Bacillota
CGG
Pro
>WENV182783698
OJSG01000723
241041
Bacillota
CGG
Pro
>WENV182784126
OJSG01015977
295350
Bacillota
TGC
Ala
>WENV182783422
OJSG01000107
293309
Bacillota
GTT
Asn
>WENV182783707
OJSG01000736
20913
Bacillota
GCT
Ser
>WENV182783917
OJSG01003050
480322
Bacillota
CTG
Gln
>WENV182783912
OJSG01002776
480322
Bacillota
CTG
Gln
>WENV182783788
OJSG01001149
480322
Bacillota
CTG
Gln
>WENV182783563
OJSG01000277
480322
Bacillota
CTG
Gln
>WENV182783915
OJSG01002968
175868
Bacillota
GTT
Asn
>WENV182783597
OJSG01000352
175868
Bacillota
GTT
Asn
>WENV182783584
OJSG01000335
200900
Bacillota
TGG
Pro
>WENV182783436
OJSG01000121
184455
Bacillota
GTC
Asp
>WENV182783625
OJSG01000427
289476
Bacillota
CGT
Thr
>WENV182783440
OJSG01000121
48832
Bacillota
TAA
Leu
>WENV182783887
OJSG01002522
398854
Bacillota
CTC
Glu
>WENV182783846
OJSG01001728
291576
Bacillota
CCC
Gly
>WENV182783552
OJSG01000247
291576
Bacillota
CCC
Gly
>WENV182783542
OJSG01000215
480324
Bacillota
TTG
Gln
>WENV182783916
OJSG01002984
497729
Bacillota
CCA
Trp
>WENV182783412
OJSG01000098
497729
Bacillota
CCA
Trp
>WENV182784034
OJSG01007863
323864
Bacillota
TGC
Ala
>WENV182783930
OJSG01003352
175911
Bacillota
GTC
Asp
>WENV182783908
OJSG01002728
175911
Bacillota
GTC
Asp
>WENV182784240
OJSG01038143
292374
Bacillota
TGC
Ala
>WENV182783499
OJSG01000185
403952
Bacillota
CTG
Gln
>WENV182783491
OJSG01000177
484479
Bacillota
GCA
Cys
>WENV182783490
OJSG01000177
484479
Bacillota
GCA
Cys
>WENV182783947
OJSG01003818
179935
Bacillota
GTC
Asp
>WENV182784108
OJSG01014593
398857
Bacillota
TTC
Glu
>WENV182783733
OJSG01000807
280444
Bacillota
GGT
Thr
>WENV182783730
OJSG01000807
280444
Bacillota
GGT
Thr
>WENV182783726
OJSG01000793
280444
Bacillota
GGT
Thr
>WENV182783701
OJSG01000723
15649
Bacillota
GGA
Ser
>WENV182783500
OJSG01000185
289745
Bacillota
TTT
Lys
>WENV182783999
OJSG01006074
179755
Bacillota
CCG
Arg
>WENV182783801
OJSG01001291
179755
Bacillota
CCG
Arg
>WENV182783545
OJSG01000220
179755
Bacillota
CCG
Arg
>WENV182783954
OJSG01003818
401111
Bacillota
TTC
Glu
>WENV182783749
OJSG01000887
289154
Bacillota
CTT
Lys
>WENV182783948
OJSG01003818
284742
Bacillota
GAA
Phe
>WENV182783881
OJSG01002366
330413
Bacillota
CTT
Lys
>WENV182783835
OJSG01001577
398832
Bacillota
TTC
Glu
>WENV182783544
OJSG01000220
398832
Bacillota
TTC
Glu
>WENV182783518
OJSG01000189
280476
Bacillota
TTT
Lys
>WENV182783587
OJSG01000335
404085
Bacillota
CCG
Arg
>WENV182783397
OJSG01000084
183995
Bacillota
GGG
Pro
>WENV182783516
OJSG01000189
175857
Bacillota
GTG
His
>WENV182783800
OJSG01001266
398833
Bacillota
TGT
Thr
>WENV182783709
OJSG01000736
403766
Bacillota
TTG
Gln
>WENV182783732
OJSG01000807
175849
Bacillota
GTC
Asp
>WENV182783725
OJSG01000793
175849
Bacillota
GTC
Asp
>WENV182783515
OJSG01000189
179166
Bacillota
TCT
Arg
>WENV182783439
OJSG01000121
489283
Bacillota
GCA
Cys
>WENV182784246
OJSG01039148
280486
Bacillota
TGC
Ala
>WENV182783744
OJSG01000863
56074
Bacillota
TGA
Ser
>WENV182783475
OJSG01000161
56074
Bacillota
TGA
Ser
>WENV182783687
OJSG01000653
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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