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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182947588
OKVM01004122
201994
Gammaproteobacteria
TCT
Arg
>WENV182947444
OKVM01000495
303732
Gammaproteobacteria
TGT
Thr
>WENV182947334
OKVM01000005
65536
Gammaproteobacteria
GGA
Ser
>WENV182947436
OKVM01000381
93215
Gammaproteobacteria
CAG
Leu
>WENV182947397
OKVM01000123
242463
Gammaproteobacteria
TCT
Arg
>WENV182947603
OKVM01004790
371167
Gammaproteobacteria
CGC
Ala
>WENV182947526
OKVM01002307
371122
Gammaproteobacteria
CAT
Met
>WENV182947503
OKVM01001385
282952
Gammaproteobacteria
TCT
Arg
>WENV182947396
OKVM01000123
176187
Gammaproteobacteria
TCG
Arg
>WENV182947472
OKVM01000937
400950
Gammaproteobacteria
CCT
Arg
>WENV182947587
OKVM01004111
176832
Gammaproteobacteria
TCT
Arg
>WENV182947616
OKVM01006889
225941
Gammaproteobacteria
GGG
Pro
>WENV182947382
OKVM01000083
93108
Gammaproteobacteria
CAG
Leu
>WENV182947613
OKVM01005440
88197
Gammaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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