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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183010981
OLDY01000726
100469
Bacillota
GTA
Tyr
>WENV183010962
OLDY01000500
118683
Bacillota
GTA
Tyr
>WENV183010980
OLDY01000726
303627
Bacillota
GAA
Phe
>WENV183010903
OLDY01000157
184537
Bacillota
ACG
Arg
>WENV183010872
OLDY01000022
408526
Bacillota
GCA
Cys
>WENV183010938
OLDY01000352
291579
Bacillota
GAA
Phe
>WENV183010989
OLDY01000902
296855
Bacillota
GGT
Thr
>WENV183010894
OLDY01000086
48505
Bacillota
TGA
Ser
>WENV183011091
OLDY01005012
287289
Bacillota
GCC
Gly
>WENV183011040
OLDY01002738
29930
Bacillota
GGA
Ser
>WENV183010891
OLDY01000076
289717
Bacillota
CTT
Lys
>WENV183010991
OLDY01000931
289717
Bacillota
CTT
Lys
>WENV183010866
OLDY01000010
400140
Bacillota
TTC
Glu
>WENV183010998
OLDY01001052
20932
Bacillota
GCT
Ser
>WENV183010909
OLDY01000168
482593
Bacillota
CCC
Gly
>WENV183010858
OLDY01000010
178942
Bacillota
ACG
Arg
>WENV183010849
OLDY01000005
180908
Bacillota
CGG
Pro
>WENV183011061
OLDY01003485
176769
Bacillota
ACG
Arg
>WENV183010881
OLDY01000047
20942
Bacillota
GGA
Ser
>WENV183011165
OLDY01014260
13376
Bacillota
CGA
Ser
>WENV183011095
OLDY01005360
487804
Bacillota
GGT
Thr
>WENV183011161
OLDY01013391
280646
Bacillota
TGC
Ala
>WENV183010990
OLDY01000902
184495
Bacillota
CAT
Met
>WENV183010879
OLDY01000045
141202
Bacillota
CAA
Leu
>WENV183011017
OLDY01001827
294020
Bacillota
TAC
Val
>WENV183010984
OLDY01000819
293309
Bacillota
GTT
Asn
>WENV183010986
OLDY01000902
289713
Bacillota
TGT
Thr
>WENV183010929
OLDY01000293
404091
Bacillota
TTG
Gln
>WENV183011111
OLDY01006118
401685
Bacillota
TTG
Gln
>WENV183010928
OLDY01000293
289716
Bacillota
GTG
His
>WENV183011102
OLDY01005997
119278
Bacillota
TAG
Leu
>WENV183011079
OLDY01003992
175911
Bacillota
GTC
Asp
>WENV183011035
OLDY01002480
292374
Bacillota
TGC
Ala
>WENV183011044
OLDY01002944
204381
Bacillota
GAT
Ile
>WENV183010904
OLDY01000157
119459
Bacillota
TAG
Leu
>WENV183010880
OLDY01000047
280547
Bacillota
GTC
Asp
>WENV183011135
OLDY01008812
482098
Bacillota
>WENV183011018
OLDY01001827
46835
Bacillota
TAA
Leu
>WENV183010939
OLDY01000352
280476
Bacillota
TTT
Lys
>WENV183010878
OLDY01000039
20943
Bacillota
CGA
Ser
>WENV183010865
OLDY01000010
8724
Bacillota
GCT
Ser
>WENV183011112
OLDY01006118
309916
Bacillota
TTT
Lys
>WENV183010848
OLDY01000003
281330
Bacillota
CTG
Gln
>WENV183010935
OLDY01000352
118359
Bacillota
GTA
Tyr
>WENV183011034
OLDY01002480
201856
Bacillota
GAT
Ile
>WENV183011082
OLDY01004060
197141
Bacillota
TGG
Pro
>WENV183010924
OLDY01000258
285601
Bacillota
TTC
Glu
>WENV183011110
OLDY01006118
175857
Bacillota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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