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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183087807
OLJO01002460
284896
Actinomycetota
CTC
Glu
>WENV183087805
OLJO01002000
284900
Actinomycetota
TTC
Glu
>WENV183087820
OLJO01002820
46892
Actinomycetota
GGA
Ser
>WENV183087804
OLJO01002000
304441
Actinomycetota
TTT
Lys
>WENV183087816
OLJO01002583
320103
Actinomycetota
GAA
Phe
>WENV183087696
OLJO01000013
400702
Actinomycetota
CTG
Gln
>WENV183087821
OLJO01002836
399132
Actinomycetota
TCC
Gly
>WENV183087822
OLJO01002970
316925
Actinomycetota
CGC
Ala
>WENV183087699
OLJO01000015
281635
Actinomycetota
GGC
Ala
>WENV183087797
OLJO01000958
300438
Actinomycetota
ACG
Arg
>WENV183087803
OLJO01001942
339485
Actinomycetota
GGC
Ala
>WENV183087806
OLJO01002195
214183
Actinomycetota
CGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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