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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183307115
OLTD01000950
118683
Bacillota
GTA
Tyr
>WENV183307191
OLTD01002713
74057
Bacillota
CAG
Leu
>WENV183307277
OLTD01013591
290391
Bacillota
TAC
Val
>WENV183307069
OLTD01000458
291579
Bacillota
GAA
Phe
>WENV183307270
OLTD01010273
285565
Bacillota
CTG
Gln
>WENV183307262
OLTD01008352
283739
Bacillota
AGT
Thr
>WENV183306999
OLTD01000137
284746
Bacillota
CTG
Gln
>WENV183307231
OLTD01005530
180700
Bacillota
GTC
Asp
>WENV183307107
OLTD01000915
180908
Bacillota
CGG
Pro
>WENV183307242
OLTD01005843
176769
Bacillota
ACG
Arg
>WENV183307192
OLTD01002730
421660
Bacillota
TTC
Glu
>WENV183307239
OLTD01005843
118297
Bacillota
TAG
Leu
>WENV183307261
OLTD01008320
481217
Bacillota
GCA
Cys
>WENV183307232
OLTD01005530
280890
Bacillota
GAA
Phe
>WENV183307280
OLTD01014106
407726
Bacillota
CTG
Gln
>WENV183307256
OLTD01007496
283795
Bacillota
CTT
Lys
>WENV183307269
OLTD01010208
56690
Bacillota
AAG
Leu
>WENV183307233
OLTD01005530
487004
Bacillota
TCC
Gly
>WENV183307109
OLTD01000920
332864
Bacillota
CTT
Lys
>WENV183306956
OLTD01000083
293309
Bacillota
GTT
Asn
>WENV183307024
OLTD01000245
482449
Bacillota
TCC
Gly
>WENV183307098
OLTD01000738
284744
Bacillota
TTT
Lys
>WENV183307217
OLTD01004351
119278
Bacillota
TAG
Leu
>WENV183307152
OLTD01001676
73638
Bacillota
AAG
Leu
>WENV183307072
OLTD01000478
179935
Bacillota
GTC
Asp
>WENV183307190
OLTD01002713
401689
Bacillota
CCG
Arg
>WENV183307028
OLTD01000245
401111
Bacillota
TTC
Glu
>WENV183307073
OLTD01000478
284742
Bacillota
GAA
Phe
>WENV183307070
OLTD01000458
280476
Bacillota
TTT
Lys
>WENV183306865
OLTD01000001
321248
Bacillota
TAC
Val
>WENV183306867
OLTD01000001
321248
Bacillota
TAC
Val
>WENV183307243
OLTD01005843
180702
Bacillota
CGG
Pro
>WENV183307246
OLTD01006158
179166
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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