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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
77 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183332674
OLWD01003627
404076
Bacillota
GCC
Gly
>WENV183332859
OLWD01011236
349107
Bacillota
GCC
Gly
>WENV183332672
OLWD01003627
184504
Bacillota
GTC
Asp
>WENV183332860
OLWD01011236
405363
Bacillota
GCA
Cys
>WENV183332468
OLWD01000444
289472
Bacillota
TTC
Glu
>WENV183332525
OLWD01001011
280428
Bacillota
GAA
Phe
>WENV183333080
OLWD01045662
232161
Bacillota
ACG
Arg
>WENV183332677
OLWD01003653
183994
Bacillota
TCT
Arg
>WENV183332349
OLWD01000087
280492
Bacillota
CTT
Lys
>WENV183332231
OLWD01000005
280492
Bacillota
CTT
Lys
>WENV183333007
OLWD01025551
231532
Bacillota
ACG
Arg
>WENV183332535
OLWD01001068
175842
Bacillota
CAC
Val
>WENV183333058
OLWD01037120
296941
Bacillota
TGC
Ala
>WENV183332794
OLWD01007861
179563
Bacillota
GAT
Ile
>WENV183332886
OLWD01012540
406553
Bacillota
TTG
Gln
>WENV183332521
OLWD01001008
101000
Bacillota
GTA
Tyr
>WENV183332793
OLWD01007861
295166
Bacillota
TGC
Ala
>WENV183333048
OLWD01032315
404079
Bacillota
CAT
Met
>WENV183332559
OLWD01001325
190476
Bacillota
CAT
Met
>WENV183332492
OLWD01000712
184522
Bacillota
CCT
Arg
>WENV183332260
OLWD01000015
73664
Bacillota
CAG
Leu
>WENV183332565
OLWD01001399
5692
Bacillota
GCT
Ser
>WENV183332498
OLWD01000779
47207
Bacillota
TGA
Ser
>WENV183332469
OLWD01000444
359682
Bacillota
TAC
Val
>WENV183332984
OLWD01021290
73009
Bacillota
CAG
Leu
>WENV183333012
OLWD01026349
481217
Bacillota
GCA
Cys
>WENV183332464
OLWD01000444
452735
Bacillota
GCC
Gly
>WENV183332524
OLWD01001008
183993
Bacillota
CAT
Met
>WENV183332542
OLWD01001119
291581
Bacillota
CGG
Pro
>WENV183332727
OLWD01005112
175859
Bacillota
TCT
Arg
>WENV183332523
OLWD01001008
289149
Bacillota
GGT
Thr
>WENV183332478
OLWD01000522
175831
Bacillota
ACG
Arg
>WENV183332670
OLWD01003412
47166
Bacillota
CGA
Ser
>WENV183332465
OLWD01000444
289147
Bacillota
GTT
Asn
>WENV183332573
OLWD01001541
289475
Bacillota
GTG
His
>WENV183332862
OLWD01011341
241041
Bacillota
CGG
Pro
>WENV183332776
OLWD01006824
183957
Bacillota
CCT
Arg
>WENV183332726
OLWD01005058
20913
Bacillota
GCT
Ser
>WENV183332606
OLWD01002034
480322
Bacillota
CTG
Gln
>WENV183332541
OLWD01001119
480322
Bacillota
CTG
Gln
>WENV183332739
OLWD01005496
175868
Bacillota
GTT
Asn
>WENV183332571
OLWD01001526
175868
Bacillota
GTT
Asn
>WENV183332675
OLWD01003653
200900
Bacillota
TGG
Pro
>WENV183332645
OLWD01002816
184455
Bacillota
GTC
Asp
>WENV183332791
OLWD01007781
48832
Bacillota
TAA
Leu
>WENV183332738
OLWD01005496
398854
Bacillota
CTC
Glu
>WENV183332462
OLWD01000438
291576
Bacillota
CCC
Gly
>WENV183332536
OLWD01001082
480324
Bacillota
TTG
Gln
>WENV183333051
OLWD01033535
497729
Bacillota
CCA
Trp
>WENV183332766
OLWD01006250
407858
Bacillota
GCC
Gly
>WENV183332652
OLWD01002975
303718
Bacillota
TGT
Thr
>WENV183332258
OLWD01000015
56079
Bacillota
AAG
Leu
>WENV183332259
OLWD01000015
56079
Bacillota
AAG
Leu
>WENV183332756
OLWD01005971
323864
Bacillota
TGC
Ala
>WENV183332466
OLWD01000444
403952
Bacillota
CTG
Gln
>WENV183332370
OLWD01000114
117745
Bacillota
GTA
Tyr
>WENV183332747
OLWD01005682
280444
Bacillota
GGT
Thr
>WENV183332718
OLWD01004736
317482
Bacillota
TAC
Val
>WENV183332405
OLWD01000202
46643
Bacillota
TGA
Ser
>WENV183332467
OLWD01000444
289745
Bacillota
TTT
Lys
>WENV183332972
OLWD01019670
179755
Bacillota
CCG
Arg
>WENV183332560
OLWD01001325
398832
Bacillota
TTC
Glu
>WENV183332416
OLWD01000237
280462
Bacillota
GAA
Phe
>WENV183332442
OLWD01000335
398852
Bacillota
CTC
Glu
>WENV183332255
OLWD01000012
398852
Bacillota
CTC
Glu
>WENV183332254
OLWD01000011
398852
Bacillota
CTC
Glu
>WENV183332678
OLWD01003653
404085
Bacillota
CCG
Arg
>WENV183332669
OLWD01003401
183995
Bacillota
GGG
Pro
>WENV183332590
OLWD01001705
184523
Bacillota
GAC
Val
>WENV183332589
OLWD01001705
184523
Bacillota
GAC
Val
>WENV183332601
OLWD01001892
398833
Bacillota
TGT
Thr
>WENV183332574
OLWD01001541
403766
Bacillota
TTG
Gln
>WENV183332417
OLWD01000237
280463
Bacillota
TTT
Lys
>WENV183332790
OLWD01007781
489283
Bacillota
GCA
Cys
>WENV183332564
OLWD01001399
56074
Bacillota
TGA
Ser
>WENV183332725
OLWD01005032
482078
Bacillota
CCC
Gly
>WENV183332840
OLWD01010422
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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