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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183622601
OOFW01000022
183784
Gammaproteobacteria
ACG
Arg
>WENV183622602
OOFW01000022
183784
Gammaproteobacteria
ACG
Arg
>WENV183622726
OOFW01003437
183784
Gammaproteobacteria
ACG
Arg
>WENV183622953
OOFW01061399
183784
Gammaproteobacteria
ACG
Arg
>WENV183622948
OOFW01059733
180717
Gammaproteobacteria
CCA
Trp
>WENV183622846
OOFW01023691
178006
Gammaproteobacteria
GGG
Pro
>WENV183622954
OOFW01061399
229522
Gammaproteobacteria
ACG
Arg
>WENV183622657
OOFW01000864
330451
Gammaproteobacteria
TTG
Gln
>WENV183622790
OOFW01009858
330451
Gammaproteobacteria
TTG
Gln
>WENV183622647
OOFW01000742
179136
Gammaproteobacteria
GAC
Val
>WENV183622667
OOFW01001007
179136
Gammaproteobacteria
GAC
Val
>WENV183622681
OOFW01001417
481678
Gammaproteobacteria
GCA
Cys
>WENV183622848
OOFW01024313
481678
Gammaproteobacteria
GCA
Cys
>WENV183622825
OOFW01017747
317792
Gammaproteobacteria
TGC
Ala
>WENV183622940
OOFW01057774
13469
Gammaproteobacteria
GCT
Ser
>WENV183622860
OOFW01026249
281939
Gammaproteobacteria
TTT
Lys
>WENV183622618
OOFW01000151
118640
Gammaproteobacteria
TAG
Leu
>WENV183622635
OOFW01000513
118640
Gammaproteobacteria
TAG
Leu
>WENV183622789
OOFW01009858
118640
Gammaproteobacteria
TAG
Leu
>WENV183622917
OOFW01047671
118640
Gammaproteobacteria
TAG
Leu
>WENV183622900
OOFW01041036
282902
Gammaproteobacteria
TGT
Thr
>WENV183622617
OOFW01000151
190582
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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