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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183734454
PJTZ01008218
362875
Gammaproteobacteria
GAA
Phe
>WENV183734455
PJTZ01008218
362875
Gammaproteobacteria
GAA
Phe
>WENV183733923
PJTZ01000003
23966
Gammaproteobacteria
CGA
Ser
>WENV183734447
PJTZ01008055
517041
Gammaproteobacteria
TCC
Gly
>WENV183734252
PJTZ01000485
330651
Gammaproteobacteria
TGT
Thr
>WENV183734076
PJTZ01000041
480367
Gammaproteobacteria
GCA
Cys
>WENV183733933
PJTZ01000004
400267
Gammaproteobacteria
CTG
Gln
>WENV183734279
PJTZ01000951
176627
Gammaproteobacteria
CCG
Arg
>WENV183734325
PJTZ01002186
63595
Gammaproteobacteria
TGA
Ser
>WENV183734374
PJTZ01003656
63595
Gammaproteobacteria
TGA
Ser
>WENV183734055
PJTZ01000032
192143
Gammaproteobacteria
GGG
Pro
>WENV183734471
PJTZ01009096
184266
Gammaproteobacteria
GAC
Val
>WENV183734080
PJTZ01000041
371167
Gammaproteobacteria
CGC
Ala
>WENV183733934
PJTZ01000004
480983
Gammaproteobacteria
CCC
Gly
>WENV183733930
PJTZ01000003
218310
Gammaproteobacteria
GTG
His
>WENV183734406
PJTZ01006130
118322
Gammaproteobacteria
TAA
Leu
>WENV183734572
PJTZ01019465
118322
Gammaproteobacteria
TAA
Leu
>WENV183734347
PJTZ01002882
205770
Gammaproteobacteria
ACG
Arg
>WENV183734435
PJTZ01007344
205770
Gammaproteobacteria
ACG
Arg
>WENV183734586
PJTZ01021102
205770
Gammaproteobacteria
ACG
Arg
>WENV183734587
PJTZ01021102
205770
Gammaproteobacteria
ACG
Arg
>WENV183734588
PJTZ01021102
205770
Gammaproteobacteria
ACG
Arg
>WENV183734433
PJTZ01007344
20472
Gammaproteobacteria
GCT
Ser
>WENV183734534
PJTZ01015843
20472
Gammaproteobacteria
GCT
Ser
>WENV183734082
PJTZ01000042
12365
Gammaproteobacteria
GCT
Ser
>WENV183734312
PJTZ01001690
29777
Gammaproteobacteria
GGA
Ser
>WENV183734705
PJTZ01046519
29777
Gammaproteobacteria
GGA
Ser
>WENV183734366
PJTZ01003431
117930
Gammaproteobacteria
CAA
Leu
>WENV183734440
PJTZ01007613
179074
Gammaproteobacteria
CCT
Arg
>WENV183734084
PJTZ01000042
139332
Gammaproteobacteria
CAG
Leu
>WENV183734085
PJTZ01000042
139332
Gammaproteobacteria
CAG
Leu
>WENV183734491
PJTZ01010802
118321
Gammaproteobacteria
TAG
Leu
>WENV183734503
PJTZ01012997
118321
Gammaproteobacteria
TAG
Leu
>WENV183734663
PJTZ01033879
118321
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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