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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183741784
PJUG01011795
283001
Actinomycetota
CGC
Ala
>WENV183741449
PJUG01000014
283698
Actinomycetota
CCG
Arg
>WENV183741461
PJUG01000018
345086
Actinomycetota
ACG
Arg
>WENV183741556
PJUG01000064
178926
Actinomycetota
TGG
Pro
>WENV183741478
PJUG01000023
400580
Actinomycetota
TTG
Gln
>WENV183741708
PJUG01001885
13314
Actinomycetota
GCT
Ser
>WENV183741728
PJUG01003820
20383
Actinomycetota
CGA
Ser
>WENV183741512
PJUG01000035
338463
Actinomycetota
CGT
Thr
>WENV183741550
PJUG01000064
480453
Actinomycetota
TCC
Gly
>WENV183741797
PJUG01014799
335310
Actinomycetota
CCG
Arg
>WENV183741463
PJUG01000018
343259
Actinomycetota
TTC
Glu
>WENV183741743
PJUG01005163
100124
Actinomycetota
CAG
Leu
>WENV183741775
PJUG01009321
118175
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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