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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183741847
PJUG01027386
102881
Bacteroidota
GTA
Tyr
>WENV183741616
PJUG01000188
179467
Bacteroidota
TGT
Thr
>WENV183741624
PJUG01000216
211453
Bacteroidota
TCT
Arg
>WENV183741629
PJUG01000231
211453
Bacteroidota
TCT
Arg
>WENV183741405
PJUG01000005
155775
Bacteroidota
TAC
Val
>WENV183741635
PJUG01000269
322882
Bacteroidota
GCC
Gly
>WENV183741589
PJUG01000110
56539
Bacteroidota
TGA
Ser
>WENV183741588
PJUG01000110
56539
Bacteroidota
TGA
Ser
>WENV183741439
PJUG01000012
56539
Bacteroidota
TGA
Ser
>WENV183741591
PJUG01000121
481286
Bacteroidota
TTG
Gln
>WENV183741600
PJUG01000156
481286
Bacteroidota
TTG
Gln
>WENV183741641
PJUG01000273
400985
Bacteroidota
GGT
Thr
>WENV183741848
PJUG01027386
352207
Bacteroidota
TCC
Gly
>WENV183741446
PJUG01000013
352207
Bacteroidota
TCC
Gly
>WENV183741437
PJUG01000012
179377
Bacteroidota
GTG
His
>WENV183741396
PJUG01000003
179377
Bacteroidota
GTG
His
>WENV183741627
PJUG01000229
156406
Bacteroidota
TAC
Val
>WENV183741601
PJUG01000167
284518
Bacteroidota
CAT
Met
>WENV183741602
PJUG01000167
284518
Bacteroidota
CAT
Met
>WENV183741747
PJUG01005964
401158
Bacteroidota
CCT
Arg
>WENV183741732
PJUG01003899
30595
Bacteroidota
GCT
Ser
>WENV183741631
PJUG01000244
192365
Bacteroidota
GTT
Asn
>WENV183741632
PJUG01000244
192365
Bacteroidota
GTT
Asn
>WENV183741496
PJUG01000031
179373
Bacteroidota
CAT
Met
>WENV183741495
PJUG01000031
179373
Bacteroidota
CAT
Met
>WENV183741638
PJUG01000273
317815
Bacteroidota
TCC
Gly
>WENV183741640
PJUG01000273
317815
Bacteroidota
TCC
Gly
>WENV183741642
PJUG01000273
481345
Bacteroidota
CCA
Trp
>WENV183741590
PJUG01000116
179466
Bacteroidota
GTG
His
>WENV183741672
PJUG01000567
282910
Bacteroidota
TTT
Lys
>WENV183741712
PJUG01002044
282910
Bacteroidota
TTT
Lys
>WENV183741604
PJUG01000176
147852
Bacteroidota
CAA
Leu
>WENV183741740
PJUG01004955
197501
Bacteroidota
TCT
Arg
>WENV183741582
PJUG01000094
401479
Bacteroidota
TTC
Glu
>WENV183741583
PJUG01000094
401479
Bacteroidota
TTC
Glu
>WENV183741643
PJUG01000276
179468
Bacteroidota
GTC
Asp
>WENV183741644
PJUG01000276
179468
Bacteroidota
GTC
Asp
>WENV183741645
PJUG01000276
179468
Bacteroidota
GTC
Asp
>WENV183741617
PJUG01000188
140945
Bacteroidota
GTA
Tyr
>WENV183741639
PJUG01000273
140945
Bacteroidota
GTA
Tyr
>WENV183741865
PJUG01032419
284228
Bacteroidota
CAT
Met
>WENV183741864
PJUG01032419
284228
Bacteroidota
CAT
Met
>WENV183741522
PJUG01000041
284228
Bacteroidota
CAT
Met
>WENV183741409
PJUG01000005
284228
Bacteroidota
CAT
Met
>WENV183741408
PJUG01000005
284228
Bacteroidota
CAT
Met
>WENV183741407
PJUG01000005
284228
Bacteroidota
CAT
Met
>WENV183741733
PJUG01003899
176427
Bacteroidota
TGG
Pro
>WENV183741444
PJUG01000013
281213
Bacteroidota
TGT
Thr
>WENV183741395
PJUG01000003
281213
Bacteroidota
TGT
Thr
>WENV183741394
PJUG01000003
281213
Bacteroidota
TGT
Thr
>WENV183741393
PJUG01000003
281213
Bacteroidota
TGT
Thr
>WENV183741646
PJUG01000284
404657
Bacteroidota
TCG
Arg
>WENV183741649
PJUG01000337
102155
Bacteroidota
GAG
Leu
>WENV183741605
PJUG01000178
200516
Bacteroidota
CAT
Met
>WENV183741447
PJUG01000013
403862
Bacteroidota
GGT
Thr
>WENV183741386
PJUG01000001
179380
Bacteroidota
GGG
Pro
>WENV183741499
PJUG01000031
179374
Bacteroidota
TGG
Pro
>WENV183741498
PJUG01000031
179374
Bacteroidota
TGG
Pro
>WENV183741497
PJUG01000031
179374
Bacteroidota
TGG
Pro
>WENV183741581
PJUG01000094
400849
Bacteroidota
TTC
Glu
>WENV183741500
PJUG01000031
480500
Bacteroidota
GCA
Cys
>WENV183741694
PJUG01001360
401031
Bacteroidota
TTC
Glu
>WENV183741603
PJUG01000170
36295
Bacteroidota
GGA
Ser
>WENV183741594
PJUG01000131
56551
Bacteroidota
>WENV183741606
PJUG01000180
56551
Bacteroidota
>WENV183741618
PJUG01000192
490277
Bacteroidota
GCA
Cys
>WENV183741595
PJUG01000139
284315
Bacteroidota
GAA
Phe
>WENV183741596
PJUG01000139
284315
Bacteroidota
GAA
Phe
>WENV183741633
PJUG01000268
281210
Bacteroidota
GCC
Gly
>WENV183741520
PJUG01000037
281210
Bacteroidota
GCC
Gly
>WENV183741636
PJUG01000269
75644
Bacteroidota
TAA
Leu
>WENV183741448
PJUG01000013
481263
Bacteroidota
CCA
Trp
>WENV183741474
PJUG01000022
147838
Bacteroidota
CAA
Leu
>WENV183741397
PJUG01000003
147838
Bacteroidota
CAA
Leu
>WENV183741719
PJUG01002341
118464
Bacteroidota
TAG
Leu
>WENV183741406
PJUG01000005
156339
Bacteroidota
TAC
Val
>WENV183741404
PJUG01000005
156339
Bacteroidota
TAC
Val
>WENV183741622
PJUG01000216
57300
Bacteroidota
GCT
Ser
>WENV183741519
PJUG01000037
281207
Bacteroidota
GAA
Phe
>WENV183741648
PJUG01000337
284520
Bacteroidota
TTT
Lys
>WENV183741650
PJUG01000337
284520
Bacteroidota
TTT
Lys
>WENV183741651
PJUG01000337
284520
Bacteroidota
TTT
Lys
>WENV183741634
PJUG01000269
118400
Bacteroidota
TAG
Leu
>WENV183741637
PJUG01000269
118400
Bacteroidota
TAG
Leu
>WENV183741626
PJUG01000229
156347
Bacteroidota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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