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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.180050 (5 seq.)
>WENV180734348
ODGZ01006373
[ODGZ] human metagenome; G_DNA_Supragingival plaque
1970
2055
+
Leu
CAA
[ENA]
¡û
>WENV180797585
ODJB01082049
[ODJB] human metagenome; G_DNA_Supragingival plaque
686
601
-
Leu
CAA
[ENA]
¡û
>WENV180945102
ODUC01069801
[ODUC] human metagenome; G_DNA_Supragingival plaque
718
803
+
Leu
CAA
[ENA]
¡û
>WENV180999069
ODVT01005696
[ODVT] human metagenome; G_DNA_Buccal mucosa
1994
2079
+
Leu
CAA
[ENA]
¡û
>WENV181081737
OEAS01356126
[OEAS] human metagenome; G_DNA_Supragingival plaque
125
40
-
Leu
CAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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