tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.184120 (62 seq.)
>W1710873095 LMMN01000012 Alphaproteobacteria Methylobacterium sp. Leaf90 [LMMN] 278188 278112 - His GTG [ENA] ¡û
>W1710874356 LMNN01000022 Alphaproteobacteria Methylobacterium sp. Leaf119 [LMNN] 696414 696338 - His GTG [ENA] ¡û
>W1710874444 LMNP01000031 Alphaproteobacteria Methylobacterium sp. Leaf121 [LMNP] 113231 113307 + His GTG [ENA] ¡û
>W1710874494 LMNQ01000039 Alphaproteobacteria Methylobacterium sp. Leaf122 [LMNQ] 196763 196687 - His GTG [ENA] ¡û
>W1710874550 LMNS01000001 Alphaproteobacteria Methylobacterium sp. Leaf123 [LMNS] 686861 686785 - His GTG [ENA] ¡û
>W1710878310 LMQV01000041 Alphaproteobacteria Methylobacterium sp. Leaf456 [LMQV] 293457 293533 + His GTG [ENA] ¡û
>W1711078691 LSNC01000047 Alphaproteobacteria Methylorubrum populi [LSNC] 540575 540499 - His GTG [ENA] ¡û
>W1711571747 MNAO01000063 Alphaproteobacteria Methylorubrum extorquens [MNAO] 15650 15574 - His GTG [ENA] ¡û
>W131051739 AMXU01000065 Alphaproteobacteria Methylobacterium sp. MB200 [AMXU] 754 678 - His GTG [ENA] ¡û
>C171092149 CP019322 Alphaproteobacteria Methylorubrum extorquens PSBB040 [CP019322] 4155728 4155804 + His GTG - ¡û
>C171115202 CP021054 Alphaproteobacteria Methylorubrum zatmanii PSBB041 [CP021054] 4656606 4656530 - His GTG - ¡û
>WENV180284484 OBID01048095 [OBID] metagenome; sludge 854 930 + His GTG [ENA] ¢þ
>WENV180688828 OCZA010296234 [OCZA] marine metagenome; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 352 276 - His GTG [ENA] ¢þ
>C08006510 CP000908 Alphaproteobacteria Methylorubrum extorquens PA1 [CP000908] 3117692 3117619 - His GTG [Ensembl] ¡û
>C08006658 CP001029 Alphaproteobacteria Methylorubrum populi BJ001 [CP001029] 3127719 3127646 - His GTG [Ensembl] ¡û
>WENV170124766 CENP01007204 [CENP] marine metagenome genome assembly TARA_030_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 172 96 - His GTG [ENA] ¢þ
>WENV170381163 CETW01128039 [CETW] marine metagenome genome assembly TARA_052_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 237 161 - His GTG [ENA] ¢þ
>WENV170393702 CEUB01232762 [CEUB] marine metagenome genome assembly TARA_138_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 335 259 - His GTG [ENA] ¢þ
>WENV170402257 CEUE01342135 [CEUE] marine metagenome genome assembly TARA_133_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 141 65 - His GTG [ENA] ¢þ
>WENV170508735 CEVX01231443 [CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 255 331 + His GTG [ENA] ¢þ
>WENV170788561 MDSV01035757 [MDSV] marine metagenome; seawater 1482 1406 - His GTG [ENA] ¢þ
>WENV170789259 MDSV01047370 [MDSV] marine metagenome; seawater 95 19 - His GTG [ENA] ¢þ
>WENV170793233 MDSV01112744 [MDSV] marine metagenome; seawater 356 432 + His GTG [ENA] ¢þ
>WENV170793418 MDSV01115820 [MDSV] marine metagenome; seawater 222 298 + His GTG [ENA] ¢þ
>WENV170807512 MDSW01099930 [MDSW] marine metagenome; seawater 861 937 + His GTG [ENA] ¢þ
>WENV170855116 MDTA01200833 [MDTA] marine metagenome; seawater 1997 1921 - His GTG [ENA] ¢þ
>WENV170869435 MDTB01175982 [MDTB] marine metagenome; seawater 14018 14094 + His GTG [ENA] ¢þ
>WENV170870923 MDTB01199340 [MDTB] marine metagenome; seawater 658 734 + His GTG [ENA] ¢þ
>WENV170872123 MDTB01214527 [MDTB] marine metagenome; seawater 2241 2165 - His GTG [ENA] ¢þ
>WENV170872260 MDTB01216156 [MDTB] marine metagenome; seawater 3397 3473 + His GTG [ENA] ¢þ
>WENV170974261 MTKY01056230 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 4222 4298 + His GTG [ENA] ¢þ
>C181000371 AP014809 Alphaproteobacteria Methylorubrum populi P-1M [AP014809] 3319696 3319620 - His GTG - ¡û
>C181175657 CP029173 Alphaproteobacteria Methylobacterium sp. DM1 [CP029173] 3296565 3296489 - His GTG - ¡û
>C181227836 LT962688 Alphaproteobacteria Methylorubrum extorquens TK 0001 [LT962688] 2761801 2761877 + His GTG - ¡û
>W09106845 ABEC01000002 Alphaproteobacteria Methylorubrum extorquens PA1 [ABEC] 190701 190625 - His GTG [ENA] ¡û
>C09107439 CP001298 Alphaproteobacteria Methylorubrum extorquens CM4 [CP001298] 3177403 3177327 - His GTG [Ensembl] ¡û
>C09107526 FP103042 Alphaproteobacteria Methylorubrum extorquens DM4 [FP103042] 3482703 3482627 - His GTG [Ensembl] ¡û
>C09107627 CP001510 Alphaproteobacteria Methylorubrum extorquens AM1 [CP001510] 3116046 3115970 - His GTG [Ensembl] ¡û
>W1911765993 QXDF01000006 Alphaproteobacteria Dichotomicrobium thermohalophilum DSM 5002 [QXDF] 27584 27508 - His GTG [ENA] ¡û
>W1810445049 PZKG01000118 Alphaproteobacteria Cereibacter changlensis JA139 [PZKG] 10777 10701 - His GTG [ENA] ¡û
>W1810658525 QJJJ01000001 Alphaproteobacteria Methylobacterium sp. B4 [QJJJ] 517571 517647 + His GTG [ENA] ¡û
>W1810686011 QKZS01000019 Alphaproteobacteria Cereibacter changlensis DSM 18774 [QKZS] 53327 53251 - His GTG [ENA] ¡û
>SRA1015780 SRR023846.197294 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 39 115 + His GTG [SRA]
>SRA1015854 SRR023846.230264 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 38 114 + His GTG [SRA]
>SRA1015900 SRR023846.248361 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 39 115 + His GTG [SRA]
>SRA1016486 SRR023846.526333 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 118 42 - His GTG [SRA]
>W10112693 ADFF01000005 Alphaproteobacteria Rhodomicrobium vannielii ATCC 17100 [ADFF] 69290 69366 + His GTG [ENA] ¡û
>W11115920 ADFF01000005 Alphaproteobacteria Rhodomicrobium vannielii ATCC 17100 [ADFF] 69290 69366 + His GTG [ENA] ¡û
>C161004986 CP006992 Alphaproteobacteria Methylobacterium sp. AMS5 [CP006992] 2904977 2904901 - His GTG [Ensembl] ¡û
>W1610042978 BAZM01001295 Alphaproteobacteria Methylorubrum rhodinum JCM 2811 [BAZM] 132 208 + His GTG [ENA] ¡û
>W1610043190 BAZP01001404 Alphaproteobacteria Methylorubrum thiocyanatum JCM 10893 [BAZP] 231 307 + His GTG [ENA] ¡û
>W121010660 AGJK01000014 Alphaproteobacteria Methylorubrum extorquens DSM 13060 [AGJK] 39589 39665 + His GTG [ENA] ¡û
>W1610735441 LMMN01000012 Alphaproteobacteria Methylobacterium sp. Leaf90 [LMMN] 278188 278112 - His GTG [ENA] ¡û
>W1610736702 LMNN01000022 Alphaproteobacteria Methylobacterium sp. Leaf119 [LMNN] 696414 696338 - His GTG [ENA] ¡û
>W1610736790 LMNP01000031 Alphaproteobacteria Methylobacterium sp. Leaf121 [LMNP] 113231 113307 + His GTG [ENA] ¡û
>W1610736840 LMNQ01000039 Alphaproteobacteria Methylobacterium sp. Leaf122 [LMNQ] 196763 196687 - His GTG [ENA] ¡û
>W1610736896 LMNS01000001 Alphaproteobacteria Methylobacterium sp. Leaf123 [LMNS] 686861 686785 - His GTG [ENA] ¡û
>W1610740656 LMQV01000041 Alphaproteobacteria Methylobacterium sp. Leaf456 [LMQV] 293457 293533 + His GTG [ENA] ¡û
>W1610917601 LSNC01000047 Alphaproteobacteria Methylorubrum populi [LSNC] 540575 540499 - His GTG [ENA] ¡û
>W1710040138 BAZM01001295 Alphaproteobacteria Methylorubrum rhodinum JCM 2811 [BAZM] 132 208 + His GTG [ENA] ¡û
>W1710040350 BAZP01001404 Alphaproteobacteria Methylorubrum thiocyanatum JCM 10893 [BAZP] 231 307 + His GTG [ENA] ¡û
>W1710567552 FOSV01000012 Alphaproteobacteria Methylorubrum salsuginis [FOSV] 149766 149690 - His GTG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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