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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.23620 (239 seq.)
>W1710860066
LMCO01000066
Alphaproteobacteria
Ensifer sp. Root31 [LMCO]
310179
310090
-
Ser
GCT
[ENA]
¡û
>W1710861630
LMDT01000034
Alphaproteobacteria
Ensifer sp. Root1252 [LMDT]
308188
308099
-
Ser
GCT
[ENA]
¡û
>W1710861808
LMDX01000001
Alphaproteobacteria
Ensifer sp. Root127 [LMDX]
326895
326806
-
Ser
GCT
[ENA]
¡û
>W1710862301
LMEG01000045
Alphaproteobacteria
Ensifer sp. Root423 [LMEG]
249330
249241
-
Ser
GCT
[ENA]
¡û
>W1710862638
LMEN01000038
Alphaproteobacteria
Ensifer sp. Root1298 [LMEN]
20518
20607
+
Ser
GCT
[ENA]
¡û
>W1710862958
LMES01000037
Alphaproteobacteria
Ensifer sp. Root1312 [LMES]
19532
19621
+
Ser
GCT
[ENA]
¡û
>W1710863802
LMFK01000033
Alphaproteobacteria
Ensifer sp. Root142 [LMFK]
1284
1195
-
Ser
GCT
[ENA]
¡û
>W1710864721
LMGC01000023
Alphaproteobacteria
Ensifer sp. Root558 [LMGC]
322222
322133
-
Ser
GCT
[ENA]
¡û
>W1710867524
LMII01000041
Alphaproteobacteria
Ensifer sp. Root74 [LMII]
19558
19647
+
Ser
GCT
[ENA]
¡û
>W1710867881
LMIQ01000036
Alphaproteobacteria
Ensifer sp. Root231 [LMIQ]
308195
308106
-
Ser
GCT
[ENA]
¡û
>W1710868228
LMIX01000034
Alphaproteobacteria
Ensifer sp. Root258 [LMIX]
308342
308253
-
Ser
GCT
[ENA]
¡û
>W1710868793
LMJJ01000034
Alphaproteobacteria
Ensifer sp. Root278 [LMJJ]
368803
368714
-
Ser
GCT
[ENA]
¡û
>W1710868921
LMJM01000023
Alphaproteobacteria
Ensifer sp. Root954 [LMJM]
487713
487802
+
Ser
GCT
[ENA]
¡û
>W1710875315
LMOH01000001
Alphaproteobacteria
Aureimonas sp. Leaf324 [LMOH]
339403
339314
-
Ser
GCT
[ENA]
¡û
>W1710877575
LMQF01000022
Alphaproteobacteria
Rhizobium sp. Leaf386 [LMQF]
817361
817450
+
Ser
GCT
[ENA]
¡û
>W1710877603
LMQG01000001
Alphaproteobacteria
Rhizobium sp. Leaf391 [LMQG]
391541
391630
+
Ser
GCT
[ENA]
¡û
>W1710878830
LMRG01000029
Alphaproteobacteria
Rhizobium sp. Leaf453 [LMRG]
67800
67889
+
Ser
GCT
[ENA]
¡û
>W1710908968
LNQB01000073
Alphaproteobacteria
Sinorhizobium saheli [LNQB]
143623
143712
+
Ser
GCT
[ENA]
¡û
>W1710909028
LNQC01000074
Alphaproteobacteria
Sinorhizobium americanum [LNQC]
21473
21384
-
Ser
GCT
[ENA]
¡û
>W1710987733
LPUX01000053
Alphaproteobacteria
Sinorhizobium glycinis [LPUX]
406663
406574
-
Ser
GCT
[ENA]
¡û
>W1711116177
LUAV01000004
Alphaproteobacteria
Ensifer aridi [LUAV]
356403
356492
+
Ser
GCT
[ENA]
¡û
>W1711120280
LUFU01000014
Alphaproteobacteria
Ensifer aridi [LUFU]
347164
347253
+
Ser
GCT
[ENA]
¡û
>W1711120328
LUFV01000010
Alphaproteobacteria
Ensifer aridi [LUFV]
404594
404683
+
Ser
GCT
[ENA]
¡û
>W1711120379
LUFW01000018
Alphaproteobacteria
Ensifer aridi [LUFW]
442286
442375
+
Ser
GCT
[ENA]
¡û
>W1711120430
LUFX01000012
Alphaproteobacteria
Ensifer aridi [LUFX]
384076
384165
+
Ser
GCT
[ENA]
¡û
>W1711233480
LYBW01000062
Alphaproteobacteria
Sinorhizobium alkalisoli YIC4027 [LYBW]
353810
353899
+
Ser
GCT
[ENA]
¡û
>W1711314168
MAUG01000002
Alphaproteobacteria
Ensifer adhaerens [MAUG]
1801
1712
-
Ser
GCT
[ENA]
¡û
>W1711334280
MBQF01000001
Alphaproteobacteria
Stappia indica [MBQF]
669182
669093
-
Ser
GCT
[ENA]
¡û
>W1711337832
MBSO01000042
Alphaproteobacteria
Ensifer sp. LC11 [MBSO]
894
805
-
Ser
GCT
[ENA]
¡û
>W1711337881
MBSP01000043
Alphaproteobacteria
Ensifer sp. LC13 [MBSP]
19371
19460
+
Ser
GCT
[ENA]
¡û
>W1711337941
MBSQ01000051
Alphaproteobacteria
Ensifer sp. LC14 [MBSQ]
902
813
-
Ser
GCT
[ENA]
¡û
>W1711337995
MBSR01000110
Alphaproteobacteria
Ensifer sp. LC54 [MBSR]
309653
309564
-
Ser
GCT
[ENA]
¡û
>W1711338018
MBSS01000012
Alphaproteobacteria
Ensifer sp. LC163 [MBSS]
309862
309773
-
Ser
GCT
[ENA]
¡û
>W1711338084
MBST01000034
Alphaproteobacteria
Ensifer sp. LC384 [MBST]
14861
14950
+
Ser
GCT
[ENA]
¡û
>W1711338130
MBSU01000032
Alphaproteobacteria
Ensifer sp. LC499 [MBSU]
56358
56269
-
Ser
GCT
[ENA]
¡û
>W1711353271
MDDV01000032
Alphaproteobacteria
Ensifer sp. LCM 4579 [MDDV]
9910
9821
-
Ser
GCT
[ENA]
¡û
>W131160083
AQWH01000006
Alphaproteobacteria
Martelella mediterranea DSM 17316 [AQWH]
182577
182488
-
Ser
GCT
[ENA]
¡û
>W1711501867
MKSC01000603
Alphaproteobacteria
Shinella sp. 65-6 [MKSC]
8884
8795
-
Ser
GCT
[ENA]
¡û
>W1711586117
MOAI01000058
Alphaproteobacteria
Ensifer sp. 1H6 [MOAI]
18039
18128
+
Ser
GCT
[ENA]
¡û
>W1711679668
MRVD01000170
Alphaproteobacteria
Ensifer adhaerens [MRVD]
964
875
-
Ser
GCT
[ENA]
¡û
>W1711751601
MUNW01000063
Alphaproteobacteria
Sinorhizobium sp. A49 [MUNW]
85573
85484
-
Ser
GCT
[ENA]
¡û
>W131165031
ARBG01000185
Alphaproteobacteria
Rhizobium giardinii bv. giardinii H152 [ARBG]
221504
221593
+
Ser
GCT
[ENA]
¡û
>C171019639
CP013051
Alphaproteobacteria
Sinorhizobium americanum CCGM7 [CP013051]
1132236
1132325
+
Ser
GCT
-
¡û
>C171020983
CP013107
Alphaproteobacteria
Sinorhizobium americanum CFNEI 73 [CP013107]
1143141
1143230
+
Ser
GCT
-
¡û
>C171049844
CP016450
Alphaproteobacteria
Sinorhizobium sp. RAC02 [CP016450]
1872424
1872335
-
Ser
GCT
-
¡û
>C171117310
CP021219
Alphaproteobacteria
Sinorhizobium meliloti RU11/001 [CP021219]
11864
11775
-
Ser
GCT
-
¡û
>C171123326
CP021793
Alphaproteobacteria
Sinorhizobium meliloti USDA1157 [CP021793]
732444
732533
+
Ser
GCT
-
¡û
>C171123416
CP021797
Alphaproteobacteria
Sinorhizobium meliloti USDA1106 [CP021797]
513478
513389
-
Ser
GCT
-
¡û
>C171123455
CP021800
Alphaproteobacteria
Sinorhizobium meliloti USDA1021 [CP021800]
1375933
1375844
-
Ser
GCT
-
¡û
>C171123508
CP021804
Alphaproteobacteria
Sinorhizobium meliloti T073 [CP021804]
1011044
1010955
-
Ser
GCT
-
¡û
>C171123559
CP021808
Alphaproteobacteria
Sinorhizobium meliloti Rm41 [CP021808]
3612297
3612386
+
Ser
GCT
-
¡û
>C171123609
CP021812
Alphaproteobacteria
Sinorhizobium meliloti M270 [CP021812]
1960254
1960165
-
Ser
GCT
-
¡û
>C171123640
CP021818
Alphaproteobacteria
Sinorhizobium meliloti M162 [CP021818]
1246726
1246815
+
Ser
GCT
-
¡û
>C171123694
CP021822
Alphaproteobacteria
Sinorhizobium meliloti KH46 [CP021822]
1768114
1768203
+
Ser
GCT
-
¡û
>C171123764
CP021825
Alphaproteobacteria
Sinorhizobium meliloti KH35c [CP021825]
2439747
2439658
-
Ser
GCT
-
¡û
>C171123797
CP021829
Alphaproteobacteria
Sinorhizobium meliloti HM006 [CP021829]
1577940
1578029
+
Ser
GCT
-
¡û
>W131160476
AQWP01000001
Alphaproteobacteria
Sinorhizobium meliloti 4H41 [AQWP]
958007
958096
+
Ser
GCT
[ENA]
¡û
>W131162662
AQZC01000014
Alphaproteobacteria
Sinorhizobium medicae WSM1115 [AQZC]
650984
651073
+
Ser
GCT
[ENA]
¡û
>W131163298
AQZQ01000005
Alphaproteobacteria
Ensifer sp. BR816 BR816 [AQZQ]
826456
826545
+
Ser
GCT
[ENA]
¡û
>W131213930
ATTK01000009
Alphaproteobacteria
Sinorhizobium meliloti MVII-I [ATTK]
74711
74622
-
Ser
GCT
[ENA]
¡û
>W131216844
ATWE01000007
Alphaproteobacteria
Ensifer sp. USDA 6670 [ATWE]
304501
304412
-
Ser
GCT
[ENA]
¡û
>W131218833
ATYB01000014
Alphaproteobacteria
Sinorhizobium arboris LMG 14919 [ATYB]
835411
835500
+
Ser
GCT
[ENA]
¡û
>W131219116
ATYH01000005
Alphaproteobacteria
Sinorhizobium meliloti CIAM1775 [ATYH]
11217
11128
-
Ser
GCT
[ENA]
¡û
>W131219456
ATYP01000016
Alphaproteobacteria
Sinorhizobium meliloti RRl128 [ATYP]
102465
102554
+
Ser
GCT
[ENA]
¡û
>W131220098
ATZC01000011
Alphaproteobacteria
Sinorhizobium meliloti GVPV12 [ATZC]
28940
28851
-
Ser
GCT
[ENA]
¡û
>W131220155
ATZD01000025
Alphaproteobacteria
Sinorhizobium meliloti Mlalz-1 [ATZD]
28909
28820
-
Ser
GCT
[ENA]
¡û
>C022803
AL591688
Alphaproteobacteria
Sinorhizobium meliloti 1021 [AL591688]
1146927
1147016
+
Ser
GCT
[Ensembl]
¡û
>W141041995
AMCX01000016
Alphaproteobacteria
Sinorhizobium fredii GR64 [AMCX]
694
605
-
Ser
GCT
[ENA]
¡û
>WENV181165041
OEIR01536043
[OEIR] soil metagenome; soil
78
167
+
Ser
GCT
[ENA]
¢þ
>WENV181167474
OEIU01031622
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
357
268
-
Ser
GCT
[ENA]
¢þ
>W141151964
AXBL01000002
Alphaproteobacteria
Sinorhizobium meliloti BO21CC [AXBL]
393798
393887
+
Ser
GCT
[ENA]
¡û
>W141152028
AXBM01000102
Alphaproteobacteria
Sinorhizobium meliloti AK58 [AXBM]
71362
71451
+
Ser
GCT
[ENA]
¡û
>W08005578
ABIA02000009
Alphaproteobacteria
Hoeflea phototrophica DFL-43 [ABIA]
114005
114094
+
Ser
GCT
[ENA]
¡û
>W141187436
AYLZ02000016
Alphaproteobacteria
Shinella sp. DD12 [AYLZ]
78276
78187
-
Ser
GCT
[ENA]
¡û
>W141207534
AZNW01000013
Alphaproteobacteria
Sinorhizobium meliloti WSM1022 [AZNW]
2152
2063
-
Ser
GCT
[ENA]
¡û
>W141207585
AZNX01000001
Alphaproteobacteria
Ensifer aridi TW10 [AZNX]
317590
317501
-
Ser
GCT
[ENA]
¡û
>W141216429
AZUW01000007
Alphaproteobacteria
Ensifer sp. WSM1721 [AZUW]
16246
16335
+
Ser
GCT
[ENA]
¡û
>W141255021
CBTS010000238
Alphaproteobacteria
Sinorhizobium meliloti RU11/001 [CBTS]
71225
71314
+
Ser
GCT
[ENA]
¡û
>WENV183729588
PJTQ01080860
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
195
106
-
Ser
GCT
[ENA]
¢þ
>WENV183730265
PJTR01010036
[PJTR] soil metagenome; Soil (2) enriched on wood chips: beechwood xylan treatment
86
175
+
Ser
GCT
[ENA]
¢þ
>WENV183734521
PJTZ01014473
[PJTZ] soil metagenome; Soil enriched (2) on filter paper
263
352
+
Ser
GCT
[ENA]
¢þ
>WENV183739634
PJUE01045216
[PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment
10
99
+
Ser
GCT
[ENA]
¢þ
>WENV183739651
PJUE01050623
[PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment
149
60
-
Ser
GCT
[ENA]
¢þ
>WENV170010587
APMI01021511
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
6894
6983
+
Ser
GCT
[ENA]
¢þ
>WENV170011625
APMI01077791
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
2234
2323
+
Ser
GCT
[ENA]
¢þ
>WENV170014040
AVFP01003136
[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
1298
1209
-
Ser
GCT
[ENA]
¢þ
>WENV170693019
LGOV01063390
[LGOV] marine sediment metagenome; sample #5579, elevator 3A push core 41 containing 12 cm of sediment, collected at Hydrate Ridge
1989
2078
+
Ser
GCT
[ENA]
¢þ
>W141461504
JFGO01000011
Alphaproteobacteria
Sinorhizobium americanum CCGM7 [JFGO]
131233
131322
+
Ser
GCT
[ENA]
¡û
>WENV170828101
MDSY01142841
[MDSY] marine metagenome; seawater
3568
3657
+
Ser
GCT
[ENA]
¢þ
>C181037807
CP019485
Alphaproteobacteria
Sinorhizobium meliloti B401 [CP019485]
1106414
1106503
+
Ser
GCT
-
¡û
>C181037858
CP019488
Alphaproteobacteria
Sinorhizobium meliloti B399 [CP019488]
1144576
1144665
+
Ser
GCT
-
¡û
>C181038015
CP019584
Alphaproteobacteria
Sinorhizobium meliloti [CP019584]
1114647
1114736
+
Ser
GCT
-
¡û
>C181075714
CP023063
Alphaproteobacteria
Sinorhizobium sp. CCBAU 05631 [CP023063]
769388
769477
+
Ser
GCT
-
¡û
>C181075766
CP023067
Alphaproteobacteria
Sinorhizobium sojae CCBAU 05684 [CP023067]
678518
678607
+
Ser
GCT
-
¡û
>C181075817
CP023070
Alphaproteobacteria
Sinorhizobium fredii CCBAU 83666 [CP023070]
724762
724851
+
Ser
GCT
-
¡û
>C181099190
CP024307
Alphaproteobacteria
Sinorhizobium fredii NXT3 [CP024307]
1132651
1132740
+
Ser
GCT
-
¡û
>C181176237
CP029231
Alphaproteobacteria
Sinorhizobium fredii CCBAU 45436 [CP029231]
759162
759251
+
Ser
GCT
-
¡û
>C181178617
CP029451
Alphaproteobacteria
Sinorhizobium fredii CCBAU 25509 [CP029451]
940684
940773
+
Ser
GCT
-
¡û
>W141726270
JNAE01000170
Alphaproteobacteria
Ensifer adhaerens [JNAE]
248642
248553
-
Ser
GCT
[ENA]
¡û
>W141819306
JQMF01000003
Alphaproteobacteria
Rhizobium sp. CF097 [JQMF]
22899
22988
+
Ser
GCT
[ENA]
¡û
>W1910005734
AYSQ01000063
Alphaproteobacteria
Sinorhizobium meliloti CCBAU 01290 [AYSQ]
122746
122835
+
Ser
GCT
[ENA]
¡û
>W1910182993
BJNI01000030
Alphaproteobacteria
Sinorhizobium fredii NBRC 14780 [BJNI]
62681
62770
+
Ser
GCT
[ENA]
¡û
>W1910183026
BJNJ01000050
Alphaproteobacteria
Sinorhizobium meliloti NBRC 14782 [BJNJ]
63427
63516
+
Ser
GCT
[ENA]
¡û
>W1910636523
LODU01000027
Alphaproteobacteria
Sinorhizobium americanum FG01 [LODU]
13498
13587
+
Ser
GCT
[ENA]
¡û
>W1910636584
LODV01000036
Alphaproteobacteria
Sinorhizobium americanum NG07B [LODV]
348984
349073
+
Ser
GCT
[ENA]
¡û
>W1910658196
MBFK01000093
Alphaproteobacteria
Sinorhizobium shofinae CCBAU 251167 [MBFK]
17372
17461
+
Ser
GCT
[ENA]
¡û
>W1910831914
MYFN01000004
Alphaproteobacteria
Shinella sumterensis MEC089 [MYFN]
76317
76406
+
Ser
GCT
[ENA]
¡û
>W1910832079
MYFQ01000004
Alphaproteobacteria
Shinella sumterensis MEC087 [MYFQ]
76334
76423
+
Ser
GCT
[ENA]
¡û
>W1910856407
NBUB01000048
Alphaproteobacteria
Sinorhizobium medicae Str17 [NBUB]
91418
91507
+
Ser
GCT
[ENA]
¡û
>W1910856458
NBUC01000059
Alphaproteobacteria
Sinorhizobium medicae Str16 [NBUC]
125252
125163
-
Ser
GCT
[ENA]
¡û
>W1910856733
NBUI01000015
Alphaproteobacteria
Sinorhizobium medicae Str10 [NBUI]
145288
145377
+
Ser
GCT
[ENA]
¡û
>W1910857078
NBUP01000119
Alphaproteobacteria
Sinorhizobium medicae Str3 [NBUP]
73756
73845
+
Ser
GCT
[ENA]
¡û
>W1910891712
NEXT01000005
Alphaproteobacteria
Sinorhizobium sp. LM21 [NEXT]
148468
148557
+
Ser
GCT
[ENA]
¡û
>C09108759
CP001389
Alphaproteobacteria
Sinorhizobium fredii NGR234 [CP001389]
870360
870449
+
Ser
GCT
[Ensembl]
¡û
>W1910942088
NJGD01000005
Alphaproteobacteria
Sinorhizobium meliloti AC50a [NJGD]
73121
73210
+
Ser
GCT
[ENA]
¡û
>W1911409666
NWTB01000034
Alphaproteobacteria
Sinorhizobium sp. FG01 [NWTB]
13498
13587
+
Ser
GCT
[ENA]
¡û
>W1911409691
NWTC01000009
Alphaproteobacteria
Sinorhizobium fredii PCH1 [NWTC]
202740
202829
+
Ser
GCT
[ENA]
¡û
>W1911409747
NWTD01000004
Alphaproteobacteria
Sinorhizobium sp. NG07B [NWTD]
348984
349073
+
Ser
GCT
[ENA]
¡û
>W1911409948
NWTH01000003
Alphaproteobacteria
Sinorhizobium sp. BJ1 [NWTH]
239534
239445
-
Ser
GCT
[ENA]
¡û
>W1911412002
NWVE01000002
Alphaproteobacteria
Sinorhizobium sp. M4_45 [NWVE]
597459
597548
+
Ser
GCT
[ENA]
¡û
>W1911412052
NWVF01000007
Alphaproteobacteria
Ensifer sp. MMN_5 [NWVF]
255286
255197
-
Ser
GCT
[ENA]
¡û
>W1911412948
NWVT01000021
Alphaproteobacteria
Ensifer sp. T2_8 [NWVT]
2999
3088
+
Ser
GCT
[ENA]
¡û
>W1911495637
OBQD01000006
Alphaproteobacteria
Rhizobium subbaraonis JC85 [OBQD]
290916
291005
+
Ser
GCT
[ENA]
¡û
>W1911497518
OCPC01000001
Alphaproteobacteria
Hoeflea halophila KCTC 23107 [OCPC]
648570
648659
+
Ser
GCT
[ENA]
¡û
>W1911614470
POVM01000003
Alphaproteobacteria
Sinorhizobium meliloti 320 [POVM]
236764
236853
+
Ser
GCT
[ENA]
¡û
>W1911701495
QNUJ01000014
Alphaproteobacteria
Shinella zoogloeoides PQ7 [QNUJ]
54046
54135
+
Ser
GCT
[ENA]
¡û
>W1911798322
QYRN01000001
Alphaproteobacteria
Aureimonas flava M2BS4Y-1 [QYRN]
351554
351465
-
Ser
GCT
[ENA]
¡û
>W1810197028
PNFP01000009
Alphaproteobacteria
Ensifer adhaerens ST2 [PNFP]
309296
309207
-
Ser
GCT
[ENA]
¡û
>W1810357262
PVNM01000306
Alphaproteobacteria
Sinorhizobium meliloti BM806 [PVNM]
253673
253762
+
Ser
GCT
[ENA]
¡û
>W1810368560
PVZR01000031
Alphaproteobacteria
Ensifer sp. NM-2 [PVZR]
62111
62022
-
Ser
GCT
[ENA]
¡û
>W1810403694
PYJO01000017
Alphaproteobacteria
Mesorhizobium loti LMG 6125 [PYJO]
71283
71372
+
Ser
GCT
[ENA]
¡û
>W1810403748
PYJP01000008
Alphaproteobacteria
Mesorhizobium plurifarium LMG 11892 [PYJP]
4945
5034
+
Ser
GCT
[ENA]
¡û
>W1810448688
PZMI01000006
Alphaproteobacteria
Sinorhizobium meliloti AK555 [PZMI]
275164
275253
+
Ser
GCT
[ENA]
¡û
>W1810448739
PZMJ01000014
Alphaproteobacteria
Sinorhizobium meliloti CXM1-105 [PZMJ]
655164
655253
+
Ser
GCT
[ENA]
¡û
>W1810570020
QEHM01000004
Alphaproteobacteria
Albibacillus kandeliae J95 [QEHM]
185500
185589
+
Ser
GCT
[ENA]
¡û
>W1810665671
QJNR01000004
Alphaproteobacteria
Ensifer sp. M14 [QJNR]
3678225
3678136
-
Ser
GCT
[ENA]
¡û
>W1810671969
QJTB01000001
Alphaproteobacteria
Ensifer adhaerens WJB133 25_10 [QJTB]
309967
309878
-
Ser
GCT
[ENA]
¡û
>W1810675929
QKLQ01000002
Alphaproteobacteria
Ensifer sp. AP48 [QKLQ]
17688
17777
+
Ser
GCT
[ENA]
¡û
>W1810696391
QLTH01000003
Alphaproteobacteria
Ensifer adhaerens AG1206 [QLTH]
19407
19496
+
Ser
GCT
[ENA]
¡û
>W1810762299
QPMK01000027
Alphaproteobacteria
Thalassococcus profundi WRAS1 [QPMK]
39977
39888
-
Ser
GCT
[ENA]
¡û
>SRA1014447
SRR023845.146041
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
51
140
+
Ser
GCT
[SRA]
>C151044680
CP009144
Alphaproteobacteria
Sinorhizobium meliloti RMO17 [CP009144]
1135893
1135982
+
Ser
GCT
[Ensembl]
¡û
>W10126549
AEDG01000041
Alphaproteobacteria
Sinorhizobium meliloti BL225C [AEDG]
43684
43773
+
Ser
GCT
[ENA]
¡û
>W10126601
AEDH01000033
Alphaproteobacteria
Sinorhizobium meliloti AK83 [AEDH]
2349
2438
+
Ser
GCT
[ENA]
¡û
>W1511344080
JRFJ01000003
Alphaproteobacteria
Aureimonas altamirensis ON-56566 [JRFJ]
573938
573849
-
Ser
GCT
[ENA]
¡û
>C11120768
CP002781
Alphaproteobacteria
Sinorhizobium meliloti AK83 [CP002781, CP002782, CP002783]
847944
848033
+
Ser
GCT
[Ensembl]
¡û
>C11120823
CP002740
Alphaproteobacteria
Sinorhizobium meliloti BL225C [CP002740]
712709
712798
+
Ser
GCT
[Ensembl]
¡û
>C11120875
CP001830
Alphaproteobacteria
Sinorhizobium meliloti SM11 [CP001830]
749845
749934
+
Ser
GCT
[Ensembl]
¡û
>W1511403303
JTLA01000006
Alphaproteobacteria
Ensifer sp. ZNC0028 [JTLA]
19684
19773
+
Ser
GCT
[ENA]
¡û
>W11133810
AEDG01000041
Alphaproteobacteria
Sinorhizobium meliloti BL225C [AEDG]
43684
43773
+
Ser
GCT
[ENA]
¡û
>W11133862
AEDH01000033
Alphaproteobacteria
Sinorhizobium meliloti AK83 [AEDH]
2349
2438
+
Ser
GCT
[ENA]
¡û
>W1511555742
JZXD01000001
Alphaproteobacteria
Sinorhizobium meliloti L5-30 [JZXD]
122253
122342
+
Ser
GCT
[ENA]
¡û
>W1511582660
LATE01000025
Alphaproteobacteria
Sinorhizobium sp. PC2 [LATE]
7076
7165
+
Ser
GCT
[ENA]
¡û
>W1511582667
LATE01000046
Alphaproteobacteria
Sinorhizobium sp. PC2 [LATE]
518103
518014
-
Ser
GCT
[ENA]
¡û
>W1511694088
LGAP01000001
Alphaproteobacteria
Ensifer adhaerens SD006 [LGAP]
45702
45791
+
Ser
GCT
[ENA]
¡û
>C121014575
CP003563
Alphaproteobacteria
Sinorhizobium fredii USDA 257 [CP003563]
830734
830823
+
Ser
GCT
[Ensembl]
¡û
>C121018123
HE616890
Alphaproteobacteria
Sinorhizobium fredii HH103 [HE616890]
823326
823415
+
Ser
GCT
[Ensembl]
¡û
>C161005653
CP007236
Alphaproteobacteria
Ensifer adhaerens OV14 [CP007236, CP007237]
2019372
2019461
+
Ser
GCT
[Ensembl]
¡û
>C161090434
CP015736
Alphaproteobacteria
Shinella sp. HZN7 [CP015736]
1228410
1228321
-
Ser
GCT
[Ensembl]
¡û
>C161092070
CP015880
Alphaproteobacteria
Ensifer adhaerens Casida A [CP015880]
832777
832866
+
Ser
GCT
[Ensembl]
¡û
>W121021503
AGVV01000011
Alphaproteobacteria
Sinorhizobium meliloti CCNWSX0020 [AGVV]
35511
35422
-
Ser
GCT
[ENA]
¡û
>W121065986
AJQM01000004
Alphaproteobacteria
Sinorhizobium fredii CCBAU 05557 [AJQM]
23214
23303
+
Ser
GCT
[ENA]
¡û
>W121066035
AJQN01000016
Alphaproteobacteria
Sinorhizobium fredii CCBAU 25509 [AJQN]
17474
17385
-
Ser
GCT
[ENA]
¡û
>W121066115
AJQO01000091
Alphaproteobacteria
Sinorhizobium fredii CCBAU 45436 [AJQO]
20901
20812
-
Ser
GCT
[ENA]
¡û
>W121066140
AJQP01000007
Alphaproteobacteria
Sinorhizobium fredii CCBAU 83622 [AJQP]
34640
34551
-
Ser
GCT
[ENA]
¡û
>W121066199
AJQQ01000034
Alphaproteobacteria
Sinorhizobium fredii CCBAU 83643 [AJQQ]
20405
20494
+
Ser
GCT
[ENA]
¡û
>W121066241
AJQR01000097
Alphaproteobacteria
Sinorhizobium fredii CCBAU 83666 [AJQR]
6193
6104
-
Ser
GCT
[ENA]
¡û
>W121066292
AJQS01000035
Alphaproteobacteria
Sinorhizobium fredii CCBAU 83753 [AJQS]
20399
20488
+
Ser
GCT
[ENA]
¡û
>W121066353
AJQT01000038
Alphaproteobacteria
Sinorhizobium sojae CCBAU 05684 [AJQT]
211217
211128
-
Ser
GCT
[ENA]
¡û
>W121066379
AJQU01000006
Alphaproteobacteria
Sinorhizobium sp. CCBAU 05631 [AJQU]
151684
151773
+
Ser
GCT
[ENA]
¡û
>W121103590
AKZR01000260
Alphaproteobacteria
Sinorhizobium meliloti H1 [AKZR]
1710
1621
-
Ser
GCT
[ENA]
¡û
>W121103620
AKZS01000104
Alphaproteobacteria
Sinorhizobium meliloti C0438LL [AKZS]
15015
15104
+
Ser
GCT
[ENA]
¡û
>W121103688
AKZT01000335
Alphaproteobacteria
Sinorhizobium meliloti C0431A [AKZT]
9735
9646
-
Ser
GCT
[ENA]
¡û
>W121103740
AKZU01000544
Alphaproteobacteria
Sinorhizobium meliloti AK75 [AKZU]
15473
15562
+
Ser
GCT
[ENA]
¡û
>W121103766
AKZV01000212
Alphaproteobacteria
Sinorhizobium meliloti AK11 [AKZV]
50219
50308
+
Ser
GCT
[ENA]
¡û
>W121103838
AKZW01000111
Alphaproteobacteria
Sinorhizobium meliloti AE608H [AKZW]
75185
75096
-
Ser
GCT
[ENA]
¡û
>W121103870
AKZX01000184
Alphaproteobacteria
Sinorhizobium meliloti A0643DD [AKZX]
15015
15104
+
Ser
GCT
[ENA]
¡û
>W121103950
AKZY01000255
Alphaproteobacteria
Sinorhizobium meliloti A0641M [AKZY]
306
395
+
Ser
GCT
[ENA]
¡û
>W121103989
AKZZ01000046
Alphaproteobacteria
Sinorhizobium meliloti 5A14 [AKZZ]
71222
71311
+
Ser
GCT
[ENA]
¡û
>W121104098
ALAA01000272
Alphaproteobacteria
Sinorhizobium meliloti 1A42 [ALAA]
63190
63279
+
Ser
GCT
[ENA]
¡û
>W1610024599
AUSY01000026
Alphaproteobacteria
Sinorhizobium sp. GW3 [AUSY]
19671
19760
+
Ser
GCT
[ENA]
¡û
>W1610024643
AUSZ01000001
Alphaproteobacteria
Sinorhizobium sp. GL28 [AUSZ]
227246
227157
-
Ser
GCT
[ENA]
¡û
>W1610024781
AUTB01000108
Alphaproteobacteria
Sinorhizobium sp. GL2 [AUTB]
1644
1555
-
Ser
GCT
[ENA]
¡û
>W1610024824
AUTC01000189
Alphaproteobacteria
Sinorhizobium fredii USDA 205 [AUTC]
104800
104711
-
Ser
GCT
[ENA]
¡û
>W1610056560
BBWJ01000018
Alphaproteobacteria
Aureimonas sp. AU22 [BBWJ]
49844
49755
-
Ser
GCT
[ENA]
¡û
>W1610056763
BBWN01000016
Alphaproteobacteria
Aurantimonas coralicida [BBWN]
296201
296290
+
Ser
GCT
[ENA]
¡û
>W1610056897
BBWQ01000009
Alphaproteobacteria
Aureimonas altamirensis [BBWQ]
120566
120655
+
Ser
GCT
[ENA]
¡û
>W1610056935
BBWR01000002
Alphaproteobacteria
Aureimonas frigidaquae [BBWR]
162906
162995
+
Ser
GCT
[ENA]
¡û
>C131010038
CP003933
Alphaproteobacteria
Sinorhizobium meliloti GR4 [CP003933]
1115489
1115578
+
Ser
GCT
[Ensembl]
¡û
>C131013055
CP004140
Alphaproteobacteria
Sinorhizobium meliloti 2011 [CP004140]
1146929
1147018
+
Ser
GCT
[Ensembl]
¡û
>C131020422
HE995405
Alphaproteobacteria
Sinorhizobium meliloti Rm41 [HE995405]
794040
794129
+
Ser
GCT
[Ensembl]
¡û
>W1610722412
LMCO01000066
Alphaproteobacteria
Ensifer sp. Root31 [LMCO]
310179
310090
-
Ser
GCT
[ENA]
¡û
>W1610723976
LMDT01000034
Alphaproteobacteria
Ensifer sp. Root1252 [LMDT]
308188
308099
-
Ser
GCT
[ENA]
¡û
>W1610724154
LMDX01000001
Alphaproteobacteria
Ensifer sp. Root127 [LMDX]
326895
326806
-
Ser
GCT
[ENA]
¡û
>W1610724647
LMEG01000045
Alphaproteobacteria
Ensifer sp. Root423 [LMEG]
249330
249241
-
Ser
GCT
[ENA]
¡û
>W1610724984
LMEN01000038
Alphaproteobacteria
Ensifer sp. Root1298 [LMEN]
20518
20607
+
Ser
GCT
[ENA]
¡û
>W1610725304
LMES01000037
Alphaproteobacteria
Ensifer sp. Root1312 [LMES]
19532
19621
+
Ser
GCT
[ENA]
¡û
>W1610726148
LMFK01000033
Alphaproteobacteria
Ensifer sp. Root142 [LMFK]
1284
1195
-
Ser
GCT
[ENA]
¡û
>W1610727067
LMGC01000023
Alphaproteobacteria
Ensifer sp. Root558 [LMGC]
322222
322133
-
Ser
GCT
[ENA]
¡û
>W1610729870
LMII01000041
Alphaproteobacteria
Ensifer sp. Root74 [LMII]
19558
19647
+
Ser
GCT
[ENA]
¡û
>W1610730227
LMIQ01000036
Alphaproteobacteria
Ensifer sp. Root231 [LMIQ]
308195
308106
-
Ser
GCT
[ENA]
¡û
>W1610730574
LMIX01000034
Alphaproteobacteria
Ensifer sp. Root258 [LMIX]
308342
308253
-
Ser
GCT
[ENA]
¡û
>W1610731139
LMJJ01000034
Alphaproteobacteria
Ensifer sp. Root278 [LMJJ]
368803
368714
-
Ser
GCT
[ENA]
¡û
>W1610731267
LMJM01000023
Alphaproteobacteria
Ensifer sp. Root954 [LMJM]
487713
487802
+
Ser
GCT
[ENA]
¡û
>W1610737661
LMOH01000001
Alphaproteobacteria
Aureimonas sp. Leaf324 [LMOH]
339403
339314
-
Ser
GCT
[ENA]
¡û
>W1610739921
LMQF01000022
Alphaproteobacteria
Rhizobium sp. Leaf386 [LMQF]
817361
817450
+
Ser
GCT
[ENA]
¡û
>W1610739949
LMQG01000001
Alphaproteobacteria
Rhizobium sp. Leaf391 [LMQG]
391541
391630
+
Ser
GCT
[ENA]
¡û
>W1610741176
LMRG01000029
Alphaproteobacteria
Rhizobium sp. Leaf453 [LMRG]
67800
67889
+
Ser
GCT
[ENA]
¡û
>W1610767327
LNQB01000073
Alphaproteobacteria
Sinorhizobium saheli [LNQB]
143623
143712
+
Ser
GCT
[ENA]
¡û
>W1610767387
LNQC01000074
Alphaproteobacteria
Sinorhizobium americanum [LNQC]
21473
21384
-
Ser
GCT
[ENA]
¡û
>W1610842677
LPUX01000053
Alphaproteobacteria
Sinorhizobium glycinis [LPUX]
406663
406574
-
Ser
GCT
[ENA]
¡û
>W1611059043
MAUG01000002
Alphaproteobacteria
Ensifer adhaerens [MAUG]
1801
1712
-
Ser
GCT
[ENA]
¡û
>W1611066247
MBQF01000001
Alphaproteobacteria
Stappia indica [MBQF]
669182
669093
-
Ser
GCT
[ENA]
¡û
>W1611066760
MBSO01000042
Alphaproteobacteria
Ensifer sp. LC11 [MBSO]
894
805
-
Ser
GCT
[ENA]
¡û
>W1611066809
MBSP01000043
Alphaproteobacteria
Ensifer sp. LC13 [MBSP]
19371
19460
+
Ser
GCT
[ENA]
¡û
>W1611066869
MBSQ01000051
Alphaproteobacteria
Ensifer sp. LC14 [MBSQ]
902
813
-
Ser
GCT
[ENA]
¡û
>W1611066923
MBSR01000110
Alphaproteobacteria
Ensifer sp. LC54 [MBSR]
309653
309564
-
Ser
GCT
[ENA]
¡û
>W1611066946
MBSS01000012
Alphaproteobacteria
Ensifer sp. LC163 [MBSS]
309862
309773
-
Ser
GCT
[ENA]
¡û
>W1611067012
MBST01000034
Alphaproteobacteria
Ensifer sp. LC384 [MBST]
14861
14950
+
Ser
GCT
[ENA]
¡û
>W1611067058
MBSU01000032
Alphaproteobacteria
Ensifer sp. LC499 [MBSU]
56358
56269
-
Ser
GCT
[ENA]
¡û
>W1710021040
AUSY01000026
Alphaproteobacteria
Sinorhizobium sp. GW3 [AUSY]
19671
19760
+
Ser
GCT
[ENA]
¡û
>W1710021084
AUSZ01000001
Alphaproteobacteria
Sinorhizobium sp. GL28 [AUSZ]
227246
227157
-
Ser
GCT
[ENA]
¡û
>W1710021222
AUTB01000108
Alphaproteobacteria
Sinorhizobium sp. GL2 [AUTB]
1644
1555
-
Ser
GCT
[ENA]
¡û
>W1710021265
AUTC01000189
Alphaproteobacteria
Sinorhizobium fredii USDA 205 [AUTC]
104800
104711
-
Ser
GCT
[ENA]
¡û
>W1710053259
BBWJ01000018
Alphaproteobacteria
Aureimonas sp. AU22 [BBWJ]
49844
49755
-
Ser
GCT
[ENA]
¡û
>W1710053462
BBWN01000016
Alphaproteobacteria
Aurantimonas coralicida [BBWN]
296201
296290
+
Ser
GCT
[ENA]
¡û
>W1710053596
BBWQ01000009
Alphaproteobacteria
Aureimonas altamirensis [BBWQ]
120566
120655
+
Ser
GCT
[ENA]
¡û
>W1710053634
BBWR01000002
Alphaproteobacteria
Aureimonas frigidaquae [BBWR]
162906
162995
+
Ser
GCT
[ENA]
¡û
>W1710509427
FMXF01000001
Alphaproteobacteria
Sinorhizobium sp. NFACC03 [FMXF]
740260
740349
+
Ser
GCT
[ENA]
¡û
>W1710521781
FNGR01000002
Alphaproteobacteria
Ensifer sp. YR511 [FNGR]
307079
306990
-
Ser
GCT
[ENA]
¡û
>W1710530208
FNOO01000037
Alphaproteobacteria
Sinorhizobium meliloti [FNOO]
11217
11128
-
Ser
GCT
[ENA]
¡û
>W1710541812
FNYP01000024
Alphaproteobacteria
Sinorhizobium meliloti [FNYP]
2601
2690
+
Ser
GCT
[ENA]
¡û
>W1710557736
FOLG01000011
Alphaproteobacteria
Tropicimonas isoalkanivorans [FOLG]
15200
15289
+
Ser
GCT
[ENA]
¡û
>W1710561253
FOOA01000002
Alphaproteobacteria
Aureimonas phyllosphaerae [FOOA]
324877
324966
+
Ser
GCT
[ENA]
¡û
>W1710561972
FOON01000011
Alphaproteobacteria
Ensifer sp. OV372 [FOON]
193491
193402
-
Ser
GCT
[ENA]
¡û
>W1710568501
FOTQ01000012
Alphaproteobacteria
Shimia aestuarii [FOTQ]
11902
11991
+
Ser
GCT
[ENA]
¡û
>W1710588117
FQZC01000001
Alphaproteobacteria
Aureimonas altamirensis DSM 21988 [FQZC]
1208015
1208104
+
Ser
GCT
[ENA]
¡û
>W1710595651
FTMB01000007
Alphaproteobacteria
Rhizobium sp. RU20A [FTMB]
2507
2418
-
Ser
GCT
[ENA]
¡û
>W1710698047
LAZS01000005
Alphaproteobacteria
Ensifer adhaerens [LAZS]
1780638
1780549
-
Ser
GCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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