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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.237225 (270 seq.)
>W1710799884
LJVG01000016
Gammaproteobacteria
Colwellia sp. MT2012 [LJVG]
34991
35066
+
Gly
GCC
[ENA]
¡û
>W1710799887
LJVG01000016
Gammaproteobacteria
Colwellia sp. MT2012 [LJVG]
35335
35410
+
Gly
GCC
[ENA]
¡û
>W1710799888
LJVG01000016
Gammaproteobacteria
Colwellia sp. MT2012 [LJVG]
35441
35516
+
Gly
GCC
[ENA]
¡û
>W1710799890
LJVG01000016
Gammaproteobacteria
Colwellia sp. MT2012 [LJVG]
36006
36081
+
Gly
GCC
[ENA]
¡û
>W1710803994
LJYX01000017
Gammaproteobacteria
Colwellia sp. TT2012 [LJYX]
298860
298785
-
Gly
GCC
[ENA]
¡û
>W1710803997
LJYX01000017
Gammaproteobacteria
Colwellia sp. TT2012 [LJYX]
298516
298441
-
Gly
GCC
[ENA]
¡û
>W1710803998
LJYX01000017
Gammaproteobacteria
Colwellia sp. TT2012 [LJYX]
298255
298180
-
Gly
GCC
[ENA]
¡û
>W1710804000
LJYX01000017
Gammaproteobacteria
Colwellia sp. TT2012 [LJYX]
297811
297736
-
Gly
GCC
[ENA]
¡û
>W1711055110
LRUI01000009
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [LRUI]
122321
122246
-
Gly
GCC
[ENA]
¡û
>W1711055113
LRUI01000009
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [LRUI]
121879
121804
-
Gly
GCC
[ENA]
¡û
>W1711055114
LRUI01000009
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [LRUI]
121775
121700
-
Gly
GCC
[ENA]
¡û
>W1711055117
LRUI01000009
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [LRUI]
121041
120966
-
Gly
GCC
[ENA]
¡û
>W1711078279
LSMS01000181
Gammaproteobacteria
Colwellia sp. Phe_37 [LSMS]
1605
1530
-
Gly
GCC
[ENA]
¡û
>W1711078282
LSMS01000181
Gammaproteobacteria
Colwellia sp. Phe_37 [LSMS]
1244
1169
-
Gly
GCC
[ENA]
¡û
>W1711078283
LSMS01000181
Gammaproteobacteria
Colwellia sp. Phe_37 [LSMS]
1118
1043
-
Gly
GCC
[ENA]
¡û
>W1711078285
LSMS01000181
Gammaproteobacteria
Colwellia sp. Phe_37 [LSMS]
848
773
-
Gly
GCC
[ENA]
¡û
>W131177274
ARKQ01000050
Gammaproteobacteria
Colwellia piezophila ATCC BAA-637 [ARKQ]
126383
126458
+
Gly
GCC
[ENA]
¡û
>W131177277
ARKQ01000050
Gammaproteobacteria
Colwellia piezophila ATCC BAA-637 [ARKQ]
126735
126810
+
Gly
GCC
[ENA]
¡û
>W131177278
ARKQ01000050
Gammaproteobacteria
Colwellia piezophila ATCC BAA-637 [ARKQ]
126879
126954
+
Gly
GCC
[ENA]
¡û
>W131177280
ARKQ01000050
Gammaproteobacteria
Colwellia piezophila ATCC BAA-637 [ARKQ]
127269
127344
+
Gly
GCC
[ENA]
¡û
>W1711499152
MKQD01000020
Gammaproteobacteria
Thalassotalea sp. PP2-459 [MKQD]
292
217
-
Gly
GCC
[ENA]
¡û
>W1711499153
MKQD01000020
Gammaproteobacteria
Thalassotalea sp. PP2-459 [MKQD]
86
11
-
Gly
GCC
[ENA]
¡û
>W1711499164
MKQD01000035
Gammaproteobacteria
Thalassotalea sp. PP2-459 [MKQD]
86
11
-
Gly
GCC
[ENA]
¡û
>W1711767460
MUZV01000008
Gammaproteobacteria
Cognaticolwellia aestuarii [MUZV]
43550
43625
+
Gly
GCC
[ENA]
¡û
>W1711767463
MUZV01000008
Gammaproteobacteria
Cognaticolwellia aestuarii [MUZV]
43911
43986
+
Gly
GCC
[ENA]
¡û
>W1711767464
MUZV01000008
Gammaproteobacteria
Cognaticolwellia aestuarii [MUZV]
44039
44114
+
Gly
GCC
[ENA]
¡û
>W1711767466
MUZV01000008
Gammaproteobacteria
Cognaticolwellia aestuarii [MUZV]
44309
44384
+
Gly
GCC
[ENA]
¡û
>W1711947441
NBOC01000006
Gammaproteobacteria
Colwellia chukchiensis [NBOC]
83335
83260
-
Gly
GCC
[ENA]
¡û
>W1711947444
NBOC01000006
Gammaproteobacteria
Colwellia chukchiensis [NBOC]
82970
82895
-
Gly
GCC
[ENA]
¡û
>W1711947445
NBOC01000006
Gammaproteobacteria
Colwellia chukchiensis [NBOC]
82842
82767
-
Gly
GCC
[ENA]
¡û
>W1711947447
NBOC01000006
Gammaproteobacteria
Colwellia chukchiensis [NBOC]
82571
82496
-
Gly
GCC
[ENA]
¡û
>W1711947515
NBOD01000010
Gammaproteobacteria
Cognaticolwellia aestuarii [NBOD]
40771
40846
+
Gly
GCC
[ENA]
¡û
>W1711947518
NBOD01000010
Gammaproteobacteria
Cognaticolwellia aestuarii [NBOD]
41132
41207
+
Gly
GCC
[ENA]
¡û
>W1711947519
NBOD01000010
Gammaproteobacteria
Cognaticolwellia aestuarii [NBOD]
41260
41335
+
Gly
GCC
[ENA]
¡û
>W1711947521
NBOD01000010
Gammaproteobacteria
Cognaticolwellia aestuarii [NBOD]
41530
41605
+
Gly
GCC
[ENA]
¡û
>W1711947579
NBOE01000008
Gammaproteobacteria
Colwellia polaris [NBOE]
160578
160503
-
Gly
GCC
[ENA]
¡û
>W1711947582
NBOE01000008
Gammaproteobacteria
Colwellia polaris [NBOE]
160218
160143
-
Gly
GCC
[ENA]
¡û
>W1711947583
NBOE01000008
Gammaproteobacteria
Colwellia polaris [NBOE]
160091
160016
-
Gly
GCC
[ENA]
¡û
>W1711947585
NBOE01000008
Gammaproteobacteria
Colwellia polaris [NBOE]
159824
159749
-
Gly
GCC
[ENA]
¡û
>W1711947617
NBOF01000001
Gammaproteobacteria
Cognaticolwellia mytili [NBOF]
1010114
1010039
-
Gly
GCC
[ENA]
¡û
>W1711947620
NBOF01000001
Gammaproteobacteria
Cognaticolwellia mytili [NBOF]
1009747
1009672
-
Gly
GCC
[ENA]
¡û
>W1711947621
NBOF01000001
Gammaproteobacteria
Cognaticolwellia mytili [NBOF]
1009622
1009547
-
Gly
GCC
[ENA]
¡û
>W1711947623
NBOF01000001
Gammaproteobacteria
Cognaticolwellia mytili [NBOF]
1009342
1009267
-
Gly
GCC
[ENA]
¡û
>W1711947625
NBOF01000001
Gammaproteobacteria
Cognaticolwellia mytili [NBOF]
1009062
1008987
-
Gly
GCC
[ENA]
¡û
>W1711947627
NBOF01000001
Gammaproteobacteria
Cognaticolwellia mytili [NBOF]
1008781
1008706
-
Gly
GCC
[ENA]
¡û
>W1711947707
NBOG01000003
Gammaproteobacteria
Cognaticolwellia sediminilitoris [NBOG]
15337
15412
+
Gly
GCC
[ENA]
¡û
>W1711947710
NBOG01000003
Gammaproteobacteria
Cognaticolwellia sediminilitoris [NBOG]
15694
15769
+
Gly
GCC
[ENA]
¡û
>W1711947711
NBOG01000003
Gammaproteobacteria
Cognaticolwellia sediminilitoris [NBOG]
15814
15889
+
Gly
GCC
[ENA]
¡û
>W1711947713
NBOG01000003
Gammaproteobacteria
Cognaticolwellia sediminilitoris [NBOG]
16089
16164
+
Gly
GCC
[ENA]
¡û
>C171034483
CP014943
Gammaproteobacteria
Colwellia sp. PAMC 21821 [CP014943]
4627953
4627878
-
Gly
GCC
-
¡û
>C171034486
CP014943
Gammaproteobacteria
Colwellia sp. PAMC 21821 [CP014943]
4627589
4627514
-
Gly
GCC
-
¡û
>C171034487
CP014943
Gammaproteobacteria
Colwellia sp. PAMC 21821 [CP014943]
4627459
4627384
-
Gly
GCC
-
¡û
>C171034489
CP014943
Gammaproteobacteria
Colwellia sp. PAMC 21821 [CP014943]
4627150
4627075
-
Gly
GCC
-
¡û
>C171034577
CP014944
Gammaproteobacteria
Colwellia sp. PAMC 20917 [CP014944]
268001
267926
-
Gly
GCC
-
¡û
>C171034580
CP014944
Gammaproteobacteria
Colwellia sp. PAMC 20917 [CP014944]
267531
267456
-
Gly
GCC
-
¡û
>C171034581
CP014944
Gammaproteobacteria
Colwellia sp. PAMC 20917 [CP014944]
267397
267322
-
Gly
GCC
-
¡û
>C171066079
CP017689
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [CP017689]
1893365
1893440
+
Gly
GCC
-
¡û
>C171066082
CP017689
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [CP017689]
1893807
1893882
+
Gly
GCC
-
¡û
>C171066083
CP017689
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [CP017689]
1893911
1893986
+
Gly
GCC
-
¡û
>C171066086
CP017689
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [CP017689]
1894645
1894720
+
Gly
GCC
-
¡û
>C171108383
CP020465
Gammaproteobacteria
Cognaticolwellia beringensis NB097-1 [CP020465]
4435340
4435265
-
Gly
GCC
-
¡û
>C171108386
CP020465
Gammaproteobacteria
Cognaticolwellia beringensis NB097-1 [CP020465]
4434975
4434900
-
Gly
GCC
-
¡û
>C171108387
CP020465
Gammaproteobacteria
Cognaticolwellia beringensis NB097-1 [CP020465]
4434847
4434772
-
Gly
GCC
-
¡û
>C171108389
CP020465
Gammaproteobacteria
Cognaticolwellia beringensis NB097-1 [CP020465]
4434581
4434506
-
Gly
GCC
-
¡û
>C006836
CP000083
Gammaproteobacteria
Colwellia psychrerythraea 34H 34H; BAA-681 [CP000083]
3398727
3398652
-
Gly
GCC
[Ensembl]
¡û
>C006839
CP000083
Gammaproteobacteria
Colwellia psychrerythraea 34H 34H; BAA-681 [CP000083]
3398379
3398304
-
Gly
GCC
[Ensembl]
¡û
>C006840
CP000083
Gammaproteobacteria
Colwellia psychrerythraea 34H 34H; BAA-681 [CP000083]
3398234
3398159
-
Gly
GCC
[Ensembl]
¡û
>C006842
CP000083
Gammaproteobacteria
Colwellia psychrerythraea 34H 34H; BAA-681 [CP000083]
3397961
3397886
-
Gly
GCC
[Ensembl]
¡û
>WENV180109937
OAPL01012869
[OAPL] marine metagenome; ENVO:00002010 for 'seawater
381
306
-
Gly
GCC
[ENA]
¢þ
>WENV180396710
OBPV01066728
[OBPV] marine metagenome; ENVO:00002010
222
297
+
Gly
GCC
[ENA]
¢þ
>WENV180396852
OBPW01016281
[OBPW] marine metagenome; seawater
434
359
-
Gly
GCC
[ENA]
¢þ
>WENV182540234
OJAF01000585
[OJAF] seawater metagenome; Sea water
407
332
-
Gly
GCC
[ENA]
¢þ
>WENV182540799
OJAP01010754
[OJAP] seawater metagenome; Sea water
138
213
+
Gly
GCC
[ENA]
¢þ
>WENV182542088
OJAV01002451
[OJAV] seawater metagenome; Sea water
3103
3178
+
Gly
GCC
[ENA]
¢þ
>WENV182543642
OJBC01000049
[OJBC] seawater metagenome; Sea water
6578
6653
+
Gly
GCC
[ENA]
¢þ
>WENV182544624
OJBI01000306
[OJBI] seawater metagenome; Sea water
6449
6524
+
Gly
GCC
[ENA]
¢þ
>WENV182544627
OJBI01000306
[OJBI] seawater metagenome; Sea water
6812
6887
+
Gly
GCC
[ENA]
¢þ
>WENV182544751
OJBJ01000986
[OJBJ] seawater metagenome; Sea water
3753
3828
+
Gly
GCC
[ENA]
¢þ
>WENV182544754
OJBJ01000986
[OJBJ] seawater metagenome; Sea water
4113
4188
+
Gly
GCC
[ENA]
¢þ
>WENV182545102
OJBM01000094
[OJBM] seawater metagenome; Sea water
344
269
-
Gly
GCC
[ENA]
¢þ
>WENV182547088
OJBR01000856
[OJBR] seawater metagenome; Sea water
9210
9135
-
Gly
GCC
[ENA]
¢þ
>WENV182547378
OJBS01001422
[OJBS] seawater metagenome; Sea water
2915
2990
+
Gly
GCC
[ENA]
¢þ
>WENV182547780
OJBT01004294
[OJBT] seawater metagenome; Sea water
951
1026
+
Gly
GCC
[ENA]
¢þ
>WENV182549170
OJBX01033380
[OJBX] seawater metagenome; Sea water
225
150
-
Gly
GCC
[ENA]
¢þ
>WENV182549222
OJBY01000012
[OJBY] seawater metagenome; Sea water
154680
154605
-
Gly
GCC
[ENA]
¢þ
>WENV182549224
OJBY01000012
[OJBY] seawater metagenome; Sea water
154386
154311
-
Gly
GCC
[ENA]
¢þ
>WENV182552437
OJCK01000080
[OJCK] seawater metagenome; Sea water
50755
50680
-
Gly
GCC
[ENA]
¢þ
>WENV182552439
OJCK01000080
[OJCK] seawater metagenome; Sea water
50466
50391
-
Gly
GCC
[ENA]
¢þ
>WENV182554616
OJCW01000149
[OJCW] seawater metagenome; Sea water
27889
27814
-
Gly
GCC
[ENA]
¢þ
>WENV182556816
OJDH01000158
[OJDH] seawater metagenome; Sea water
52139
52064
-
Gly
GCC
[ENA]
¢þ
>WENV182557045
OJDI01000509
[OJDI] seawater metagenome; Sea water
12632
12557
-
Gly
GCC
[ENA]
¢þ
>WENV182557047
OJDI01000509
[OJDI] seawater metagenome; Sea water
12343
12268
-
Gly
GCC
[ENA]
¢þ
>WENV182557698
OJDK01002696
[OJDK] seawater metagenome; Sea water
410
335
-
Gly
GCC
[ENA]
¢þ
>WENV182558717
OJDN01001314
[OJDN] seawater metagenome; Sea water
6578
6653
+
Gly
GCC
[ENA]
¢þ
>WENV182560020
OJDR01000287
[OJDR] seawater metagenome; Sea water
6612
6687
+
Gly
GCC
[ENA]
¢þ
>WENV182560022
OJDR01000296
[OJDR] seawater metagenome; Sea water
129
204
+
Gly
GCC
[ENA]
¢þ
>WENV182560607
OJDU01010016
[OJDU] seawater metagenome; Sea water
431
356
-
Gly
GCC
[ENA]
¢þ
>WENV182565281
OJEH01001501
[OJEH] seawater metagenome; Sea water
6578
6653
+
Gly
GCC
[ENA]
¢þ
>WENV182565872
OJEI01000611
[OJEI] seawater metagenome; Sea water
6578
6653
+
Gly
GCC
[ENA]
¢þ
>WENV182565874
OJEI01000611
[OJEI] seawater metagenome; Sea water
6867
6942
+
Gly
GCC
[ENA]
¢þ
>WENV182566199
OJEJ01000801
[OJEJ] seawater metagenome; Sea water
339
264
-
Gly
GCC
[ENA]
¢þ
>WENV182567121
OJEN01003631
[OJEN] seawater metagenome; Sea water
2508
2583
+
Gly
GCC
[ENA]
¢þ
>WENV182567460
OJEO01001465
[OJEO] seawater metagenome; Sea water
1455
1380
-
Gly
GCC
[ENA]
¢þ
>WENV182567738
OJEP01000090
[OJEP] seawater metagenome; Sea water
11748
11823
+
Gly
GCC
[ENA]
¢þ
>WENV182568285
OJET01000035
[OJET] seawater metagenome; Sea water
51911
51836
-
Gly
GCC
[ENA]
¢þ
>WENV182568587
OJEV01011267
[OJEV] seawater metagenome; Sea water
64
139
+
Gly
GCC
[ENA]
¢þ
>WENV182568590
OJEV01011267
[OJEV] seawater metagenome; Sea water
425
500
+
Gly
GCC
[ENA]
¢þ
>WENV182568839
OJEX01000045
[OJEX] seawater metagenome; Sea water
7095
7020
-
Gly
GCC
[ENA]
¢þ
>WENV182569644
OJFA01001678
[OJFA] seawater metagenome; Sea water
419
344
-
Gly
GCC
[ENA]
¢þ
>WENV182572998
OJFO01016325
[OJFO] seawater metagenome; Sea water
591
516
-
Gly
GCC
[ENA]
¢þ
>WENV182572999
OJFO01016325
[OJFO] seawater metagenome; Sea water
465
390
-
Gly
GCC
[ENA]
¢þ
>WENV182573001
OJFO01016325
[OJFO] seawater metagenome; Sea water
176
101
-
Gly
GCC
[ENA]
¢þ
>WENV182573121
OJFP01000137
[OJFP] seawater metagenome; Sea water
6576
6651
+
Gly
GCC
[ENA]
¢þ
>WENV182574926
OJFS01008604
[OJFS] seawater metagenome; Sea water
79
4
-
Gly
GCC
[ENA]
¢þ
>WENV182575210
OJFU01001009
[OJFU] seawater metagenome; Sea water
848
773
-
Gly
GCC
[ENA]
¢þ
>WENV182575213
OJFU01001009
[OJFU] seawater metagenome; Sea water
509
434
-
Gly
GCC
[ENA]
¢þ
>WENV182575562
OJFV01000068
[OJFV] seawater metagenome; Sea water
71371
71296
-
Gly
GCC
[ENA]
¢þ
>WENV182577031
OJGC01000651
[OJGC] seawater metagenome; Sea water
820
745
-
Gly
GCC
[ENA]
¢þ
>WENV182577693
OJGH01001166
[OJGH] seawater metagenome; Sea water
1799
1724
-
Gly
GCC
[ENA]
¢þ
>WENV182578830
OJGP01005775
[OJGP] seawater metagenome; Sea water
790
715
-
Gly
GCC
[ENA]
¢þ
>WENV182579694
OJGT01000008
[OJGT] seawater metagenome; Sea water
78608
78683
+
Gly
GCC
[ENA]
¢þ
>WENV182580190
OJGU01011528
[OJGU] seawater metagenome; Sea water
1102
1027
-
Gly
GCC
[ENA]
¢þ
>WENV182580683
OJGW01007449
[OJGW] seawater metagenome; Sea water
263
188
-
Gly
GCC
[ENA]
¢þ
>WENV182581280
OJGX01002075
[OJGX] seawater metagenome; Sea water
679
604
-
Gly
GCC
[ENA]
¢þ
>WENV182581283
OJGX01002075
[OJGX] seawater metagenome; Sea water
319
244
-
Gly
GCC
[ENA]
¢þ
>WENV182581284
OJGX01002075
[OJGX] seawater metagenome; Sea water
192
117
-
Gly
GCC
[ENA]
¢þ
>WENV182584323
OJHG01000008
[OJHG] seawater metagenome; Sea water
59439
59514
+
Gly
GCC
[ENA]
¢þ
>WENV182586951
OJHK01018127
[OJHK] seawater metagenome; Sea water
2
77
+
Gly
GCC
[ENA]
¢þ
>WENV182588041
OJHO01001391
[OJHO] seawater metagenome; Sea water
3270
3345
+
Gly
GCC
[ENA]
¢þ
>WENV182588314
OJHR01002403
[OJHR] seawater metagenome; Sea water
305
230
-
Gly
GCC
[ENA]
¢þ
>WENV182588809
OJHY01000097
[OJHY] seawater metagenome; Sea water
18837
18762
-
Gly
GCC
[ENA]
¢þ
>WENV182590614
OJIJ01000379
[OJIJ] seawater metagenome; Sea water
5647
5722
+
Gly
GCC
[ENA]
¢þ
>WENV182591570
OJIO01000529
[OJIO] seawater metagenome; Sea water
6650
6575
-
Gly
GCC
[ENA]
¢þ
>WENV182594002
OJIV01000039
[OJIV] seawater metagenome; Sea water
6578
6653
+
Gly
GCC
[ENA]
¢þ
>WENV183055492
OLHD01000027
[OLHD] seawater metagenome; Sea water
49416
49341
-
Gly
GCC
[ENA]
¢þ
>WENV183055727
OLHF01000351
[OLHF] seawater metagenome; Sea water
3437
3512
+
Gly
GCC
[ENA]
¢þ
>WENV183056568
OLHJ01001035
[OLHJ] seawater metagenome; Sea water
6594
6669
+
Gly
GCC
[ENA]
¢þ
>WENV183058025
OLHN01000830
[OLHN] seawater metagenome; Sea water
77
2
-
Gly
GCC
[ENA]
¢þ
>WENV183059818
OLHV01008434
[OLHV] seawater metagenome; Sea water
315
240
-
Gly
GCC
[ENA]
¢þ
>WENV183065070
OLII01017095
[OLII] seawater metagenome; Sea water
1011
1086
+
Gly
GCC
[ENA]
¢þ
>WENV183522218
OMOM01000918
[OMOM] seawater metagenome; Sea water
6694
6769
+
Gly
GCC
[ENA]
¢þ
>WENV170537102
CEWQ01002949
[CEWQ] marine metagenome genome assembly TARA_085_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
651
726
+
Gly
GCC
[ENA]
¢þ
>WENV170647007
JQIA01007750
[JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead
5391
5463
+
Gly
GCC
[ENA]
¢þ
>WENV170704330
LLEJ01003571
[LLEJ] bioreactor metagenome; day101 10degC chemostat 2011 inoculated with Wadden Sea sediment taken from the upper 2 cm of the
12
87
+
Gly
GCC
[ENA]
¢þ
>WENV170704908
LLEN01013613
[LLEN] bioreactor metagenome; day86 10degC chemostat 2012 inoculated with Wadden Sea sediment taken from the upper 2 cm of the
216
141
-
Gly
GCC
[ENA]
¢þ
>WENV170780331
MAAA01028787
[MAAA] seawater metagenome; sample BD02T6 sea water enriched with oil for 6 days
1193
1268
+
Gly
GCC
[ENA]
¢þ
>WENV170780595
MAAB01007674
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
12658
12583
-
Gly
GCC
[ENA]
¢þ
>WENV170780596
MAAB01007674
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
12372
12297
-
Gly
GCC
[ENA]
¢þ
>WENV170780990
MAAB01028921
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
32940
32865
-
Gly
GCC
[ENA]
¢þ
>WENV170780993
MAAB01028921
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
32233
32158
-
Gly
GCC
[ENA]
¢þ
>WENV170780994
MAAB01028921
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
32088
32013
-
Gly
GCC
[ENA]
¢þ
>WENV170781005
MAAB01029024
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
7369
7444
+
Gly
GCC
[ENA]
¢þ
>WENV170781008
MAAB01029024
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
7712
7787
+
Gly
GCC
[ENA]
¢þ
>WENV170781009
MAAB01029024
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
7969
8044
+
Gly
GCC
[ENA]
¢þ
>WENV170781011
MAAB01029024
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
8246
8321
+
Gly
GCC
[ENA]
¢þ
>WENV170781051
MAAB01029213
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
101407
101482
+
Gly
GCC
[ENA]
¢þ
>WENV170781053
MAAB01029213
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
101826
101901
+
Gly
GCC
[ENA]
¢þ
>WENV170781054
MAAB01029213
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
102070
102145
+
Gly
GCC
[ENA]
¢þ
>WENV170781103
MAAB01029407
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
5078
5153
+
Gly
GCC
[ENA]
¢þ
>WENV170781105
MAAB01029407
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
5414
5489
+
Gly
GCC
[ENA]
¢þ
>WENV170781106
MAAB01029407
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
5563
5638
+
Gly
GCC
[ENA]
¢þ
>WENV170781108
MAAB01029407
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
5835
5910
+
Gly
GCC
[ENA]
¢þ
>WENV170781110
MAAB01029407
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
6225
6300
+
Gly
GCC
[ENA]
¢þ
>WENV170781160
MAAB01029582
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
156
231
+
Gly
GCC
[ENA]
¢þ
>WENV170781161
MAAB01029582
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
301
376
+
Gly
GCC
[ENA]
¢þ
>WENV170781163
MAAB01029582
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
576
651
+
Gly
GCC
[ENA]
¢þ
>WENV170781255
MAAB01030390
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
1789
1864
+
Gly
GCC
[ENA]
¢þ
>WENV170781271
MAAB01030495
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
248
173
-
Gly
GCC
[ENA]
¢þ
>WENV170781297
MAAB01031505
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
202
127
-
Gly
GCC
[ENA]
¢þ
>WENV170781298
MAAB01031564
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
765
690
-
Gly
GCC
[ENA]
¢þ
>WENV170781301
MAAB01031564
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
217
142
-
Gly
GCC
[ENA]
¢þ
>WENV170781302
MAAB01031564
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
89
14
-
Gly
GCC
[ENA]
¢þ
>WENV170781305
MAAB01032006
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
815
740
-
Gly
GCC
[ENA]
¢þ
>WENV170781308
MAAB01032006
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
360
285
-
Gly
GCC
[ENA]
¢þ
>WENV170781309
MAAB01032006
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
231
156
-
Gly
GCC
[ENA]
¢þ
>WENV170782467
MAAC01010131
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
2534
2459
-
Gly
GCC
[ENA]
¢þ
>WENV170782470
MAAC01010131
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
1862
1787
-
Gly
GCC
[ENA]
¢þ
>WENV170782471
MAAC01010131
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
1717
1642
-
Gly
GCC
[ENA]
¢þ
>WENV170782501
MAAC01010171
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
468628
468553
-
Gly
GCC
[ENA]
¢þ
>WENV170782504
MAAC01010171
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
468211
468136
-
Gly
GCC
[ENA]
¢þ
>WENV170782505
MAAC01010171
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
467925
467850
-
Gly
GCC
[ENA]
¢þ
>WENV170782894
MAAC01011851
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
17467
17392
-
Gly
GCC
[ENA]
¢þ
>WENV170782922
MAAC01012088
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
11999
12074
+
Gly
GCC
[ENA]
¢þ
>WENV170782925
MAAC01012088
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
12342
12417
+
Gly
GCC
[ENA]
¢þ
>WENV170782926
MAAC01012088
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
12467
12542
+
Gly
GCC
[ENA]
¢þ
>WENV170782928
MAAC01012088
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
13010
13085
+
Gly
GCC
[ENA]
¢þ
>WENV170783115
MAAC01013748
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
115
40
-
Gly
GCC
[ENA]
¢þ
>WENV170783137
MAAC01014120
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
154
229
+
Gly
GCC
[ENA]
¢þ
>WENV170783197
MAAC01014832
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
18413
18488
+
Gly
GCC
[ENA]
¢þ
>WENV170783238
MAAC01015266
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
4869
4944
+
Gly
GCC
[ENA]
¢þ
>WENV170783241
MAAC01015266
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
5241
5316
+
Gly
GCC
[ENA]
¢þ
>WENV170783242
MAAC01015266
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
5358
5433
+
Gly
GCC
[ENA]
¢þ
>WENV170783249
MAAC01015387
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
22584
22509
-
Gly
GCC
[ENA]
¢þ
>WENV170783252
MAAC01015387
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
22241
22166
-
Gly
GCC
[ENA]
¢þ
>WENV170783253
MAAC01015387
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
21984
21909
-
Gly
GCC
[ENA]
¢þ
>WENV170783255
MAAC01015387
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
21707
21632
-
Gly
GCC
[ENA]
¢þ
>WENV170783628
MAAC01018286
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
11476
11551
+
Gly
GCC
[ENA]
¢þ
>WENV170783630
MAAC01018286
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
11807
11882
+
Gly
GCC
[ENA]
¢þ
>WENV170783631
MAAC01018286
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
11914
11989
+
Gly
GCC
[ENA]
¢þ
>WENV170783633
MAAC01018286
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
12202
12277
+
Gly
GCC
[ENA]
¢þ
>WENV170823995
MDSY01068165
[MDSY] marine metagenome; seawater
5346
5421
+
Gly
GCC
[ENA]
¢þ
>C181169925
CP028924
Gammaproteobacteria
Colwellia sp. Arc7-D [CP028924]
1736050
1736125
+
Gly
GCC
-
¡û
>C181169928
CP028924
Gammaproteobacteria
Colwellia sp. Arc7-D [CP028924]
1736413
1736488
+
Gly
GCC
-
¡û
>C181169929
CP028924
Gammaproteobacteria
Colwellia sp. Arc7-D [CP028924]
1736538
1736613
+
Gly
GCC
-
¡û
>C181169931
CP028924
Gammaproteobacteria
Colwellia sp. Arc7-D [CP028924]
1736824
1736899
+
Gly
GCC
-
¡û
>C191128373
CP034660
Gammaproteobacteria
Colwellia sp. Arc7-635 [CP034660]
2803474
2803399
-
Gly
GCC
-
¡û
>C191128376
CP034660
Gammaproteobacteria
Colwellia sp. Arc7-635 [CP034660]
2803112
2803037
-
Gly
GCC
-
¡û
>C191128377
CP034660
Gammaproteobacteria
Colwellia sp. Arc7-635 [CP034660]
2802981
2802906
-
Gly
GCC
-
¡û
>C191128379
CP034660
Gammaproteobacteria
Colwellia sp. Arc7-635 [CP034660]
2802713
2802638
-
Gly
GCC
-
¡û
>C191130497
CP034759
Gammaproteobacteria
Litorilituus sediminis JCM 17549 [CP034759]
1022588
1022513
-
Gly
GCC
-
¡û
>W1911770236
QXIO01000009
Gammaproteobacteria
Colwellia sp. RSH04 [QXIO]
150835
150760
-
Gly
GCC
[ENA]
¡û
>W1911770240
QXIO01000009
Gammaproteobacteria
Colwellia sp. RSH04 [QXIO]
150411
150336
-
Gly
GCC
[ENA]
¡û
>W1810155102
PJAI01000084
Gammaproteobacteria
Colwellia echini A3T [PJAI]
96349
96274
-
Gly
GCC
[ENA]
¡û
>W1810155105
PJAI01000084
Gammaproteobacteria
Colwellia echini A3T [PJAI]
95954
95879
-
Gly
GCC
[ENA]
¡û
>W1810155106
PJAI01000084
Gammaproteobacteria
Colwellia echini A3T [PJAI]
95669
95594
-
Gly
GCC
[ENA]
¡û
>W1810155108
PJAI01000084
Gammaproteobacteria
Colwellia echini A3T [PJAI]
95407
95332
-
Gly
GCC
[ENA]
¡û
>W1810155336
PJAQ01000015
Gammaproteobacteria
Colwellia sp. 12G3 [PJAQ]
12033
12108
+
Gly
GCC
[ENA]
¡û
>W1810155339
PJAQ01000015
Gammaproteobacteria
Colwellia sp. 12G3 [PJAQ]
12382
12457
+
Gly
GCC
[ENA]
¡û
>W1810155340
PJAQ01000015
Gammaproteobacteria
Colwellia sp. 12G3 [PJAQ]
12681
12756
+
Gly
GCC
[ENA]
¡û
>W1810155342
PJAQ01000015
Gammaproteobacteria
Colwellia sp. 12G3 [PJAQ]
12955
13030
+
Gly
GCC
[ENA]
¡û
>W1810155573
PJAU01000056
Gammaproteobacteria
Colwellia sp. 75C3 [PJAU]
173710
173635
-
Gly
GCC
[ENA]
¡û
>W1810155576
PJAU01000056
Gammaproteobacteria
Colwellia sp. 75C3 [PJAU]
173367
173292
-
Gly
GCC
[ENA]
¡û
>W1810155577
PJAU01000056
Gammaproteobacteria
Colwellia sp. 75C3 [PJAU]
173223
173148
-
Gly
GCC
[ENA]
¡û
>W1810155579
PJAU01000056
Gammaproteobacteria
Colwellia sp. 75C3 [PJAU]
172912
172837
-
Gly
GCC
[ENA]
¡û
>W1810155581
PJAU01000056
Gammaproteobacteria
Colwellia sp. 75C3 [PJAU]
172518
172443
-
Gly
GCC
[ENA]
¡û
>W1810155985
PJBA01000006
Gammaproteobacteria
Colwellia sp. Bg11-28 [PJBA]
727360
727435
+
Gly
GCC
[ENA]
¡û
>W1810155988
PJBA01000006
Gammaproteobacteria
Colwellia sp. Bg11-28 [PJBA]
727708
727783
+
Gly
GCC
[ENA]
¡û
>W1810155989
PJBA01000006
Gammaproteobacteria
Colwellia sp. Bg11-28 [PJBA]
727853
727928
+
Gly
GCC
[ENA]
¡û
>W1810155991
PJBA01000006
Gammaproteobacteria
Colwellia sp. Bg11-28 [PJBA]
728127
728202
+
Gly
GCC
[ENA]
¡û
>W1810735895
QOLD01000063
Gammaproteobacteria
Candidatus Colwellia aromaticivorans Bin11-node4 [QOLD]
3519
3444
-
Gly
GCC
[ENA]
¡û
>W1810735898
QOLD01000063
Gammaproteobacteria
Candidatus Colwellia aromaticivorans Bin11-node4 [QOLD]
3057
2982
-
Gly
GCC
[ENA]
¡û
>W1810735899
QOLD01000063
Gammaproteobacteria
Candidatus Colwellia aromaticivorans Bin11-node4 [QOLD]
2949
2874
-
Gly
GCC
[ENA]
¡û
>W1511322705
JQDZ01000047
Gammaproteobacteria
Thalassotalea sp. ND16A [JQDZ]
43871
43796
-
Gly
GCC
[ENA]
¡û
>W1511322708
JQDZ01000047
Gammaproteobacteria
Thalassotalea sp. ND16A [JQDZ]
43541
43466
-
Gly
GCC
[ENA]
¡û
>W1511322709
JQDZ01000047
Gammaproteobacteria
Thalassotalea sp. ND16A [JQDZ]
43433
43358
-
Gly
GCC
[ENA]
¡û
>W1511322711
JQDZ01000047
Gammaproteobacteria
Thalassotalea sp. ND16A [JQDZ]
42567
42492
-
Gly
GCC
[ENA]
¡û
>W1511322713
JQDZ01000047
Gammaproteobacteria
Thalassotalea sp. ND16A [JQDZ]
42118
42043
-
Gly
GCC
[ENA]
¡û
>W1511322920
JQEC01000075
Gammaproteobacteria
Colwellia psychrerythraea GAB14E [JQEC]
91610
91685
+
Gly
GCC
[ENA]
¡û
>W1511322923
JQEC01000075
Gammaproteobacteria
Colwellia psychrerythraea GAB14E [JQEC]
91955
92030
+
Gly
GCC
[ENA]
¡û
>W1511322924
JQEC01000075
Gammaproteobacteria
Colwellia psychrerythraea GAB14E [JQEC]
92091
92166
+
Gly
GCC
[ENA]
¡û
>W1511322926
JQEC01000075
Gammaproteobacteria
Colwellia psychrerythraea GAB14E [JQEC]
92511
92586
+
Gly
GCC
[ENA]
¡û
>W1511322995
JQED01000056
Gammaproteobacteria
Colwellia psychrerythraea ND2E [JQED]
93584
93659
+
Gly
GCC
[ENA]
¡û
>W1511322998
JQED01000056
Gammaproteobacteria
Colwellia psychrerythraea ND2E [JQED]
93926
94001
+
Gly
GCC
[ENA]
¡û
>W1511322999
JQED01000056
Gammaproteobacteria
Colwellia psychrerythraea ND2E [JQED]
94071
94146
+
Gly
GCC
[ENA]
¡û
>W1511323001
JQED01000056
Gammaproteobacteria
Colwellia psychrerythraea ND2E [JQED]
94346
94421
+
Gly
GCC
[ENA]
¡û
>C161052229
CP013145
Gammaproteobacteria
Colwellia sp. MT41 [CP013145]
1506384
1506459
+
Gly
GCC
[Ensembl]
¡û
>C161052232
CP013145
Gammaproteobacteria
Colwellia sp. MT41 [CP013145]
1506728
1506803
+
Gly
GCC
[Ensembl]
¡û
>C161052233
CP013145
Gammaproteobacteria
Colwellia sp. MT41 [CP013145]
1507120
1507195
+
Gly
GCC
[Ensembl]
¡û
>C161052235
CP013145
Gammaproteobacteria
Colwellia sp. MT41 [CP013145]
1507696
1507771
+
Gly
GCC
[Ensembl]
¡û
>W1610663841
LJVG01000016
Gammaproteobacteria
Colwellia sp. MT2012 [LJVG]
34991
35066
+
Gly
GCC
[ENA]
¡û
>W1610663844
LJVG01000016
Gammaproteobacteria
Colwellia sp. MT2012 [LJVG]
35335
35410
+
Gly
GCC
[ENA]
¡û
>W1610663845
LJVG01000016
Gammaproteobacteria
Colwellia sp. MT2012 [LJVG]
35441
35516
+
Gly
GCC
[ENA]
¡û
>W1610663847
LJVG01000016
Gammaproteobacteria
Colwellia sp. MT2012 [LJVG]
36006
36081
+
Gly
GCC
[ENA]
¡û
>W1610667851
LJYX01000017
Gammaproteobacteria
Colwellia sp. TT2012 [LJYX]
298860
298785
-
Gly
GCC
[ENA]
¡û
>W1610667854
LJYX01000017
Gammaproteobacteria
Colwellia sp. TT2012 [LJYX]
298516
298441
-
Gly
GCC
[ENA]
¡û
>W1610667855
LJYX01000017
Gammaproteobacteria
Colwellia sp. TT2012 [LJYX]
298255
298180
-
Gly
GCC
[ENA]
¡û
>W1610667857
LJYX01000017
Gammaproteobacteria
Colwellia sp. TT2012 [LJYX]
297811
297736
-
Gly
GCC
[ENA]
¡û
>W1610896156
LRUI01000009
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [LRUI]
122321
122246
-
Gly
GCC
[ENA]
¡û
>W1610896159
LRUI01000009
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [LRUI]
121879
121804
-
Gly
GCC
[ENA]
¡û
>W1610896160
LRUI01000009
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [LRUI]
121775
121700
-
Gly
GCC
[ENA]
¡û
>W1610896163
LRUI01000009
Gammaproteobacteria
Thalassotalea crassostreae LPB0090 [LRUI]
121041
120966
-
Gly
GCC
[ENA]
¡û
>W1610917295
LSMS01000181
Gammaproteobacteria
Colwellia sp. Phe_37 [LSMS]
1605
1530
-
Gly
GCC
[ENA]
¡û
>W1610917298
LSMS01000181
Gammaproteobacteria
Colwellia sp. Phe_37 [LSMS]
1244
1169
-
Gly
GCC
[ENA]
¡û
>W1610917299
LSMS01000181
Gammaproteobacteria
Colwellia sp. Phe_37 [LSMS]
1118
1043
-
Gly
GCC
[ENA]
¡û
>W1610917301
LSMS01000181
Gammaproteobacteria
Colwellia sp. Phe_37 [LSMS]
848
773
-
Gly
GCC
[ENA]
¡û
>W1710087361
BDQM01000038
Gammaproteobacteria
Colwellia marinimaniae [BDQM]
34623
34698
+
Gly
GCC
[ENA]
¡û
>W1710087364
BDQM01000038
Gammaproteobacteria
Colwellia marinimaniae [BDQM]
34967
35042
+
Gly
GCC
[ENA]
¡û
>W1710087365
BDQM01000038
Gammaproteobacteria
Colwellia marinimaniae [BDQM]
35073
35148
+
Gly
GCC
[ENA]
¡û
>W1710545246
FOBI01000005
Gammaproteobacteria
Colwellia chukchiensis [FOBI]
102724
102799
+
Gly
GCC
[ENA]
¡û
>W1710545247
FOBI01000005
Gammaproteobacteria
Colwellia chukchiensis [FOBI]
102852
102927
+
Gly
GCC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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