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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
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1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.238013 (67 seq.)
>W1710809598
LKEQ01000008
Alphaproteobacteria
Wolbachia endosymbiont of Trichogramma pretiosum [LKEQ]
44505
44580
+
Ala
TGC
[ENA]
¡û
>W1711055066
LRUH01000054
Alphaproteobacteria
Wolbachia endosymbiont of Laodelphax striatellus of Laodelphax striatella [LRUH]
861
786
-
Ala
TGC
[ENA]
¡û
>W1711088481
LSYY01000120
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYY]
5798
5723
-
Ala
TGC
[ENA]
¡û
>W1711088490
LSYY01000136
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYY]
795
720
-
Ala
TGC
[ENA]
¡û
>W1711258807
LYUV01000002
Alphaproteobacteria
Wolbachia endosymbiont of Nomada leucophthalma [LYUV]
26694
26769
+
Ala
TGC
[ENA]
¡û
>W1711258841
LYUW01000003
Alphaproteobacteria
Wolbachia endosymbiont of Nomada flava [LYUW]
26086
26161
+
Ala
TGC
[ENA]
¡û
>W1711258872
LYUX01000002
Alphaproteobacteria
Wolbachia endosymbiont of Nomada panzeri [LYUX]
17664
17739
+
Ala
TGC
[ENA]
¡û
>W1711258913
LYUY01000007
Alphaproteobacteria
Wolbachia endosymbiont of Nomada ferruginata [LYUY]
8192
8267
+
Ala
TGC
[ENA]
¡û
>W1711466330
MJMG01000007
Alphaproteobacteria
Wolbachia pipientis [MJMG]
32766
32691
-
Ala
TGC
[ENA]
¡û
>W1711745713
MUJL01000093
Alphaproteobacteria
Wolbachia pipientis wUni [MUJL]
2303
2228
-
Ala
TGC
[ENA]
¡û
>W1711745743
MUJM01000072
Alphaproteobacteria
Wolbachia pipientis wVitA [MUJM]
15266
15191
-
Ala
TGC
[ENA]
¡û
>W1712108420
NJBR01000014
Alphaproteobacteria
Wolbachia endosymbiont of Wuchereria bancrofti [NJBR]
12655
12582
-
Ala
TGC
[ENA]
¡û
>W131052825
AMZJ01000065
Alphaproteobacteria
Wolbachia endosymbiont of Diaphorina citri [AMZJ]
18450
18525
+
Ala
TGC
[ENA]
¡û
>W131242643
CAOH01000082
Alphaproteobacteria
Wolbachia pipientis wBol1-b [CAOH]
78854
78929
+
Ala
TGC
[ENA]
¡û
>W131243118
CAOU02000032
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila suzukii str. valsugana of Drosophila suzukii [CAOU]
12518
12443
-
Ala
TGC
[ENA]
¡û
>C026845
AE017196
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila melanogaster wMel [AE017196]
934985
934910
-
Ala
TGC
[Ensembl]
¡û
>C026886
AE017321
Alphaproteobacteria
Wolbachia endosymbiont strain TRS of Brugia malayi [AE017321]
81143
81071
-
Ala
TGC
[Ensembl]
¡û
>w016792
AAQP01000023
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila willistoni of Drosophila willistoni TSC#14030-0811.24 [AAQP]
3857
3934
+
Ala
TGC
[ENA]
¡û
>W141001022
ADHD01000157
Alphaproteobacteria
Wolbachia endosymbiont of Wuchereria bancrofti [ADHD]
1750
1677
-
Ala
TGC
[ENA]
¡û
>W141001032
ADHD01000451
Alphaproteobacteria
Wolbachia endosymbiont of Wuchereria bancrofti [ADHD]
490
417
-
Ala
TGC
[ENA]
¡û
>w005425
AAGC01000096
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans [AAGC]
1300
1223
-
Ala
TGC
[ENA]
¡û
>W141065638
AQQE01000059
Alphaproteobacteria
Wolbachia pipientis wMelPop [AQQE]
26364
26289
-
Ala
TGC
[ENA]
¡û
>WENV181405228
OGCC01000050
[OGCC] insect metagenome; haemolymph
4976
5051
+
Ala
TGC
[ENA]
¢þ
>WENV181405295
OGCD01000134
[OGCD] insect metagenome; haemolymph
224
149
-
Ala
TGC
[ENA]
¢þ
>W141145091
AWUH01000125
Alphaproteobacteria
Wolbachia endosymbiont of Glossina morsitans morsitans [AWUH]
9551
9476
-
Ala
TGC
[ENA]
¡û
>W141240222
CAGB01000112
Alphaproteobacteria
Wolbachia pipientis wAlbB [CAGB]
1213
1138
-
Ala
TGC
[ENA]
¡û
>C08011414
AM999887
Alphaproteobacteria
Wolbachia endosymbiont of Culex quinquefasciatus Pel wPip [AM999887]
1070592
1070520
-
Ala
TGC
[Ensembl]
¡û
>C181017553
CP015510
Alphaproteobacteria
Wolbachia endosymbiont of Folsomia candida Berlin [CP015510]
414138
414211
+
Ala
TGC
-
¡û
>C191074334
CP031221
Alphaproteobacteria
Wolbachia pipientis wAlbB [CP031221]
1399463
1399388
-
Ala
TGC
-
¡û
>C191123113
CP034333
Alphaproteobacteria
Wolbachia endosymbiont of Brugia malayi [CP034333]
493746
493674
-
Ala
TGC
-
¡û
>C191123136
CP034334
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila mauritiana wMau [CP034334]
405743
405818
+
Ala
TGC
-
¡û
>C191123170
CP034335
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila mauritiana wMau [CP034335]
405746
405821
+
Ala
TGC
-
¡û
>C191188708
CP041215
Alphaproteobacteria
Wolbachia endosymbiont of Carposina sasakii [CP041215]
51169
51244
+
Ala
TGC
-
¡û
>W09113850
ABZA01000001
Alphaproteobacteria
Wolbachia endosymbiont of Culex quinquefasciatus of Culex quinquefasciatus JHB [ABZA]
294477
294402
-
Ala
TGC
[ENA]
¡û
>W09121815
ACFP01000204
Alphaproteobacteria
Wolbachia endosymbiont of Muscidifurax uniraptor [ACFP]
3140
3215
+
Ala
TGC
[ENA]
¡û
>W141812287
JQAM01000029
Alphaproteobacteria
Wolbachia pipientis [JQAM]
26688
26613
-
Ala
TGC
[ENA]
¡û
>W1910213469
FMKF01000093
Alphaproteobacteria
Wolbachia endosymbiont of Bemisia tabaci [FMKF]
4201
4276
+
Ala
TGC
[ENA]
¡û
>W1910753959
MKIF01000063
Alphaproteobacteria
Wolbachia sp. wRi [MKIF]
12735
12660
-
Ala
TGC
[ENA]
¡û
>W1910759039
MLZJ01000142
Alphaproteobacteria
Wolbachia sp. wMel_KL [MLZJ]
15174
15099
-
Ala
TGC
[ENA]
¡û
>W1910760287
MNCG01000142
Alphaproteobacteria
Wolbachia sp. wMel_AMD [MNCG]
15174
15099
-
Ala
TGC
[ENA]
¡û
>W1910794368
MRWX01000045
Alphaproteobacteria
Wolbachia pipientis wAus [MRWX]
7753
7828
+
Ala
TGC
[ENA]
¡û
>W1911239449
NSDR01000032
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_India [NSDR]
12783
12708
-
Ala
TGC
[ENA]
¡û
>W1911239484
NSDS01000016
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_Hawaii [NSDS]
12685
12610
-
Ala
TGC
[ENA]
¡û
>W1911239530
NSDT01000067
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_Indonesia [NSDT]
12783
12708
-
Ala
TGC
[ENA]
¡û
>W1911281117
NTHL01000067
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila subpulchrella of Drosophila subpulchrella wSpc [NTHL]
13606
13531
-
Ala
TGC
[ENA]
¡û
>W1911412140
NWVH01000008
Alphaproteobacteria
Wolbachia pipientis FL2016 [NWVH]
3060
2985
-
Ala
TGC
[ENA]
¡û
>W1911412175
NWVI01000004
Alphaproteobacteria
Wolbachia pipientis HN2016 [NWVI]
7707
7782
+
Ala
TGC
[ENA]
¡û
>W1911412228
NWVJ01000040
Alphaproteobacteria
Wolbachia pipientis HN2016 [NWVJ]
8139
8214
+
Ala
TGC
[ENA]
¡û
>W1911412282
NWVK01000057
Alphaproteobacteria
Wolbachia pipientis FL2016 [NWVK]
7979
7904
-
Ala
TGC
[ENA]
¡û
>W1810758339
QPIP01000013
Alphaproteobacteria
Wolbachia endosymbiont of Cylisticus convexus of Cylisticus convexus Wcon [QPIP]
29619
29544
-
Ala
TGC
[ENA]
¡û
>W1810758362
QPIP01000236
Alphaproteobacteria
Wolbachia endosymbiont of Cylisticus convexus of Cylisticus convexus Wcon [QPIP]
19862
19787
-
Ala
TGC
[ENA]
¡û
>C151102209
LK055284
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wAu [LK055284]
910152
910227
+
Ala
TGC
[Ensembl]
¡û
>W1510562600
CTEH01000001
Alphaproteobacteria
Wolbachia endosymbiont of Culex molestus wPip_Mol of Culex molestus [CTEH]
24223
24148
-
Ala
TGC
[ENA]
¡û
>W1511183966
JMCJ01000632
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus of Dactylopius coccus wCoc1 [JMCJ]
78
3
-
Ala
TGC
[ENA]
¡û
>W1511536227
JYPC01000098
Alphaproteobacteria
Wolbachia endosymbiont of Operophtera brumata of Operophtera brumata Ob_Wba [JYPC]
10439
10514
+
Ala
TGC
[ENA]
¡û
>W11145952
AERW01000245
Alphaproteobacteria
Wolbachia endosymbiont of Nasonia vitripennis wVitB of Nasonia vitripennis [AERW]
135
60
-
Ala
TGC
[ENA]
¡û
>W11185729
CACK01000093
Alphaproteobacteria
Wolbachia endosymbiont of Culex pipiens molestus [CACK]
7692
7767
+
Ala
TGC
[ENA]
¡û
>C131009131
CP003883
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wNo [CP003883]
784374
784299
-
Ala
TGC
[Ensembl]
¡û
>C131009161
CP003884
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wHa [CP003884]
967517
967442
-
Ala
TGC
[Ensembl]
¡û
>W1610673704
LKEQ01000008
Alphaproteobacteria
Wolbachia endosymbiont of Trichogramma pretiosum [LKEQ]
44505
44580
+
Ala
TGC
[ENA]
¡û
>W1610896112
LRUH01000054
Alphaproteobacteria
Wolbachia endosymbiont of Laodelphax striatellus of Laodelphax striatella [LRUH]
861
786
-
Ala
TGC
[ENA]
¡û
>W1610923020
LSYY01000120
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYY]
5798
5723
-
Ala
TGC
[ENA]
¡û
>W1610923029
LSYY01000136
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYY]
795
720
-
Ala
TGC
[ENA]
¡û
>W1611021072
LYUV01000002
Alphaproteobacteria
Wolbachia endosymbiont of Nomada leucophthalma [LYUV]
26694
26769
+
Ala
TGC
[ENA]
¡û
>W1611021106
LYUW01000003
Alphaproteobacteria
Wolbachia endosymbiont of Nomada flava [LYUW]
26086
26161
+
Ala
TGC
[ENA]
¡û
>W1611021137
LYUX01000002
Alphaproteobacteria
Wolbachia endosymbiont of Nomada panzeri [LYUX]
17664
17739
+
Ala
TGC
[ENA]
¡û
>W1611021178
LYUY01000007
Alphaproteobacteria
Wolbachia endosymbiont of Nomada ferruginata [LYUY]
8192
8267
+
Ala
TGC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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