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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
454 Sequencing (SRP001809)
Anticodon = GGT
HIT:
24 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.272842 (5 seq.)
>WENV170612148
FUWD012512890
[FUWD] metagenome; unknown
156
83
-
Thr
GGT
[ENA]
¢þ
>SRA1032454
SRR035088.13379
454 Sequencing (SRP001809)
156
83
-
Thr
GGT
[SRA]
>SRA1033968
SRR035088.426139
454 Sequencing (SRP001809)
88
15
-
Thr
GGT
[SRA]
>SRA1036116
SRR035089.448165
454 Sequencing (SRP001810)
140
67
-
Thr
GGT
[SRA]
>SRA1049782
SRR035095.137575
454 Sequencing (SRP001816)
147
220
+
Thr
GGT
[SRA]
Identical group No.272862 (8 seq.)
>WENV170571958
FLOH01000415
[FLOH] marine metagenome; water
39068
38992
-
Thr
GGT
[ENA]
¢þ
>WENV170624797
FUWD013187107
[FUWD] metagenome; unknown
525
449
-
Thr
GGT
[ENA]
¢þ
>WENV170633070
FUWD013391056
[FUWD] metagenome; unknown
525
449
-
Thr
GGT
[ENA]
¢þ
>WENV170696484
LGVF01020722
[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
730
806
+
Thr
GGT
[ENA]
¢þ
>SRA1031019
SRR035087.360853
454 Sequencing (SRP001808)
356
280
-
Thr
GGT
[SRA]
>SRA1032655
SRR035088.73595
454 Sequencing (SRP001809)
131
55
-
Thr
GGT
[SRA]
>SRA1036264
SRR035089.482942
454 Sequencing (SRP001810)
21
97
+
Thr
GGT
[SRA]
>SRA1049423
SRR035095.75424
454 Sequencing (SRP001816)
214
138
-
Thr
GGT
[SRA]
Identical group No.272933 (12 seq.)
>W131235340
AULM01000022
Thermodesulfobacteriota
Desulfatiglans anilini DSM 4660 [AULM]
65325
65401
+
Thr
GGT
[ENA]
¡û
>WENV180315382
OBKH01079310
[OBKH] soil metagenome; rice field; elevated CO2 plus elevated temperature
198
122
-
Thr
GGT
[ENA]
¢þ
>WENV180317284
OBKJ01097467
[OBKJ] metagenome; hydrothermal vent
74
150
+
Thr
GGT
[ENA]
¢þ
>WENV181414063
OGCK01210071
[OGCK] hot springs metagenome; hot spring sediment
368
292
-
Thr
GGT
[ENA]
¢þ
>WENV170617846
FUWD012939106
[FUWD] metagenome; unknown
208
284
+
Thr
GGT
[ENA]
¢þ
>WENV170660624
JXWU01004837
[JXWU] soil metagenome; rice field; organic control Plot
339
415
+
Thr
GGT
[ENA]
¢þ
>SRA1032621
SRR035088.65823
454 Sequencing (SRP001809)
145
221
+
Thr
GGT
[SRA]
>SRA1032929
SRR035088.131908
454 Sequencing (SRP001809)
246
170
-
Thr
GGT
[SRA]
>SRA1036644
SRR035089.571235
454 Sequencing (SRP001810)
187
111
-
Thr
GGT
[SRA]
>SRA1037643
SRR035090.168035
454 Sequencing (SRP001811)
42
118
+
Thr
GGT
[SRA]
>W10123436
ADZZ01000208
Unclassified
delta proteobacterium NaphS2 [ADZZ]
18280
18204
-
Thr
GGT
[ENA]
¡û
>W11130234
ADZZ01000208
Unclassified
delta proteobacterium NaphS2 [ADZZ]
18280
18204
-
Thr
GGT
[ENA]
¡û
Identical group No.357578 (7 seq.)
>WENV170600494
FUWD010129541
[FUWD] metagenome; unknown
375
299
-
Thr
GGT
[ENA]
¢þ
>WENV170600893
FUWD010146648
[FUWD] metagenome; unknown
339
413
+
Thr
GGT
[ENA]
¢þ
>WENV170626172
FUWD013215719
[FUWD] metagenome; unknown
198
122
-
Thr
GGT
[ENA]
¢þ
>SRA1033519
SRR035088.277121
454 Sequencing (SRP001809)
375
299
-
Thr
GGT
[SRA]
>SRA1041732
SRR035091.283847
454 Sequencing (SRP001812)
304
228
-
Thr
GGT
[SRA]
>SRA1041917
SRR035091.315427
454 Sequencing (SRP001812)
344
270
-
Thr
GGT
[SRA]
>SRA1042237
SRR035091.360295
454 Sequencing (SRP001812)
198
122
-
Thr
GGT
[SRA]
Identical group No.415308 (2 seq.)
>W1711317616
MAXL01000266
Thermodesulfobacteriota
Desulfobacterales bacterium S5133MH16 [MAXL]
302
226
-
Thr
GGT
[ENA]
¡û
>SRA1032542
SRR035088.41771
454 Sequencing (SRP001809)
213
137
-
Thr
GGT
[SRA]
Identical group No.415353 (1 seq.)
>SRA1033139
SRR035088.181604
454 Sequencing (SRP001809)
472
395
-
Thr
GGT
[SRA]
Identical group No.415423 (1 seq.)
>SRA1034085
SRR035088.481263
454 Sequencing (SRP001809)
306
379
+
Thr
GGT
[SRA]
Identical group No.453309 (5 seq.)
>WENV170622534
FUWD013108145
[FUWD] metagenome; unknown
360
435
+
Thr
GGT
[ENA]
¢þ
>WENV170630755
FUWD013322339
[FUWD] metagenome; unknown
360
435
+
Thr
GGT
[ENA]
¢þ
>SRA1025921
SRR035085.110687
454 Sequencing (SRP001806)
393
468
+
Thr
GGT
[SRA]
>SRA1026220
SRR035085.165640
454 Sequencing (SRP001806)
70
145
+
Thr
GGT
[SRA]
>SRA1033868
SRR035088.385193
454 Sequencing (SRP001809)
316
241
-
Thr
GGT
[SRA]
Identical group No.453380 (121 seq.)
>W1710858999
LMBR01000100
Chlorobiota
Chlorobium limicola [LMBR]
4041
3968
-
Thr
GGT
[ENA]
¡û
>W1711136058
LUZT01000005
Chlorobiota
Chlorobiales bacterium Clorobi_01 [LUZT]
506452
506377
-
Thr
GGT
[ENA]
¡û
>W1711626077
MPJE01000019
Chlorobiota
Chlorobium sp. KB01 [MPJE]
35457
35384
-
Thr
GGT
[ENA]
¡û
>C171049443
CP016432
Chlorobiota
Prosthecochloris sp. CIB 2401 [CP016432]
263560
263633
+
Thr
GGT
-
¡û
>C171060552
CP017305
Chlorobiota
Chlorobaculum limnaeum DSM 1677 [CP017305]
82922
82997
+
Thr
GGT
-
¡û
>C005289
CP000108
Chlorobiota
Chlorobium chlorochromatii [CP000108]
399460
399532
+
Thr
GGT
[Ensembl]
¡û
>C006575
CP000492
Chlorobiota
Chlorobium phaeobacteroides DSM 266 [CP000492]
253131
253203
+
Thr
GGT
[Ensembl]
¡û
>C007006
AE006470
Chlorobiota
Chlorobaculum tepidum TLS [AE006470]
152200
152275
+
Thr
GGT
[Ensembl]
¡û
>C018258
CP000607
Chlorobiota
Chlorobium phaeovibrioides [CP000607]
1795457
1795385
-
Thr
GGT
[Ensembl]
¡û
>w018061
AASE01000035
Chlorobiota
Chlorobium ferrooxidans DSM 13031 [AASE]
11200
11275
+
Thr
GGT
[ENA]
¡û
>w007148
AAIJ01000002
Chlorobiota
Prosthecochloris aestuarii DSM 271 [AAIJ]
1441
1364
-
Thr
GGT
[ENA]
¡û
>w006128
AAHJ01000052
Chlorobiota
Chlorobium limicola DSM 245 [AAHJ]
187
264
+
Thr
GGT
[ENA]
¡û
>C08003490
CP001097
Chlorobiota
Chlorobium limicola DSM 245 [CP001097]
210715
210788
+
Thr
GGT
[Ensembl]
¡û
>C08003631
CP001101
Chlorobiota
Chlorobium phaeobacteroides [CP001101]
311817
311890
+
Thr
GGT
[Ensembl]
¡û
>C08003607
CP001099
Chlorobiota
Chlorobaculum parvum NCIB 8327 [CP001099]
2083370
2083295
-
Thr
GGT
[Ensembl]
¡û
>C08007150
CP001108
Chlorobiota
Prosthecochloris aestuarii DSM 271 [CP001108]
298341
298414
+
Thr
GGT
[Ensembl]
¡û
>WENV183812094
PYLN01000002
[PYLN] freshwater metagenome; meromictic lake
30464
30391
-
Thr
GGT
[ENA]
¢þ
>WENV170598901
FUWD010054310
[FUWD] metagenome; unknown
171
98
-
Thr
GGT
[ENA]
¢þ
>WENV170613994
FUWD012823312
[FUWD] metagenome; unknown
14696
14769
+
Thr
GGT
[ENA]
¢þ
>WENV170624598
FUWD013183728
[FUWD] metagenome; unknown
8246
8319
+
Thr
GGT
[ENA]
¢þ
>WENV170624600
FUWD013183729
[FUWD] metagenome; unknown
2
75
+
Thr
GGT
[ENA]
¢þ
>WENV170632881
FUWD013388245
[FUWD] metagenome; unknown
8246
8319
+
Thr
GGT
[ENA]
¢þ
>WENV170632883
FUWD013388246
[FUWD] metagenome; unknown
2
75
+
Thr
GGT
[ENA]
¢þ
>W09102644
AAIB01000004
Chlorobiota
Chlorobium phaeobacteroides DSM 266 [AAIB]
40634
40561
-
Thr
GGT
[ENA]
¡û
>W09103349
AAJD01000003
Chlorobiota
Chlorobium phaeovibrioides DSM 265 [AAJD]
204506
204579
+
Thr
GGT
[ENA]
¡û
>W1810062179
PDNX01000007
Chlorobiota
Prosthecochloris sp. ZM [PDNX]
2640766
2640693
-
Thr
GGT
[ENA]
¡û
>SRA1019877
SRR035083.10803
454 Sequencing (SRP001804)
140
67
-
Thr
GGT
[SRA]
>SRA1019904
SRR035083.18618
454 Sequencing (SRP001804)
117
44
-
Thr
GGT
[SRA]
>SRA1019914
SRR035083.20556
454 Sequencing (SRP001804)
24
97
+
Thr
GGT
[SRA]
>SRA1019942
SRR035083.26255
454 Sequencing (SRP001804)
24
97
+
Thr
GGT
[SRA]
>SRA1020002
SRR035083.39351
454 Sequencing (SRP001804)
23
96
+
Thr
GGT
[SRA]
>SRA1020043
SRR035083.46700
454 Sequencing (SRP001804)
42
115
+
Thr
GGT
[SRA]
>SRA1020091
SRR035083.56609
454 Sequencing (SRP001804)
221
294
+
Thr
GGT
[SRA]
>SRA1020185
SRR035083.69195
454 Sequencing (SRP001804)
47
120
+
Thr
GGT
[SRA]
>SRA1020268
SRR035083.86654
454 Sequencing (SRP001804)
56
129
+
Thr
GGT
[SRA]
>SRA1020359
SRR035083.101598
454 Sequencing (SRP001804)
142
69
-
Thr
GGT
[SRA]
>SRA1020401
SRR035083.109098
454 Sequencing (SRP001804)
418
345
-
Thr
GGT
[SRA]
>SRA1020410
SRR035083.110863
454 Sequencing (SRP001804)
140
67
-
Thr
GGT
[SRA]
>SRA1020471
SRR035083.119812
454 Sequencing (SRP001804)
357
282
-
Thr
GGT
[SRA]
>SRA1020492
SRR035083.122621
454 Sequencing (SRP001804)
466
539
+
Thr
GGT
[SRA]
>SRA1020735
SRR035083.157200
454 Sequencing (SRP001804)
453
526
+
Thr
GGT
[SRA]
>SRA1020770
SRR035083.162038
454 Sequencing (SRP001804)
138
211
+
Thr
GGT
[SRA]
>SRA1021042
SRR035083.202516
454 Sequencing (SRP001804)
81
8
-
Thr
GGT
[SRA]
>SRA1021398
SRR035083.254628
454 Sequencing (SRP001804)
14
87
+
Thr
GGT
[SRA]
>SRA1021577
SRR035083.275398
454 Sequencing (SRP001804)
121
194
+
Thr
GGT
[SRA]
>SRA1021652
SRR035083.287571
454 Sequencing (SRP001804)
23
96
+
Thr
GGT
[SRA]
>SRA1022213
SRR035083.368908
454 Sequencing (SRP001804)
23
96
+
Thr
GGT
[SRA]
>SRA1022484
SRR035083.412217
454 Sequencing (SRP001804)
152
225
+
Thr
GGT
[SRA]
>SRA1022663
SRR035083.439134
454 Sequencing (SRP001804)
478
405
-
Thr
GGT
[SRA]
>SRA1023065
SRR035083.514021
454 Sequencing (SRP001804)
38
111
+
Thr
GGT
[SRA]
>SRA1023079
SRR035083.516646
454 Sequencing (SRP001804)
38
111
+
Thr
GGT
[SRA]
>SRA1023095
SRR035083.519559
454 Sequencing (SRP001804)
14
87
+
Thr
GGT
[SRA]
>SRA1026321
SRR035085.185260
454 Sequencing (SRP001806)
238
165
-
Thr
GGT
[SRA]
>SRA1028807
SRR035087.12237
454 Sequencing (SRP001808)
248
321
+
Thr
GGT
[SRA]
>SRA1029075
SRR035087.69287
454 Sequencing (SRP001808)
238
311
+
Thr
GGT
[SRA]
>SRA1029252
SRR035087.98062
454 Sequencing (SRP001808)
188
261
+
Thr
GGT
[SRA]
>SRA1032562
SRR035088.47530
454 Sequencing (SRP001809)
128
55
-
Thr
GGT
[SRA]
>SRA1032626
SRR035088.66700
454 Sequencing (SRP001809)
162
235
+
Thr
GGT
[SRA]
>SRA1032721
SRR035088.86779
454 Sequencing (SRP001809)
100
27
-
Thr
GGT
[SRA]
>SRA1032863
SRR035088.118389
454 Sequencing (SRP001809)
108
181
+
Thr
GGT
[SRA]
>SRA1033010
SRR035088.151199
454 Sequencing (SRP001809)
155
82
-
Thr
GGT
[SRA]
>SRA1036340
SRR035089.498190
454 Sequencing (SRP001810)
296
369
+
Thr
GGT
[SRA]
>SRA1036591
SRR035089.556216
454 Sequencing (SRP001810)
391
318
-
Thr
GGT
[SRA]
>SRA1036818
SRR035090.13946
454 Sequencing (SRP001811)
445
372
-
Thr
GGT
[SRA]
>SRA1036877
SRR035090.30685
454 Sequencing (SRP001811)
120
193
+
Thr
GGT
[SRA]
>SRA1036888
SRR035090.31835
454 Sequencing (SRP001811)
292
217
-
Thr
GGT
[SRA]
>SRA1036930
SRR035090.40403
454 Sequencing (SRP001811)
378
451
+
Thr
GGT
[SRA]
>SRA1037067
SRR035090.69197
454 Sequencing (SRP001811)
119
192
+
Thr
GGT
[SRA]
>SRA1037201
SRR035090.92308
454 Sequencing (SRP001811)
116
189
+
Thr
GGT
[SRA]
>SRA1037333
SRR035090.117969
454 Sequencing (SRP001811)
143
216
+
Thr
GGT
[SRA]
>SRA1037528
SRR035090.147682
454 Sequencing (SRP001811)
420
347
-
Thr
GGT
[SRA]
>SRA1037617
SRR035090.163946
454 Sequencing (SRP001811)
54
127
+
Thr
GGT
[SRA]
>SRA1037698
SRR035090.175882
454 Sequencing (SRP001811)
400
327
-
Thr
GGT
[SRA]
>SRA1038016
SRR035090.234080
454 Sequencing (SRP001811)
11
84
+
Thr
GGT
[SRA]
>SRA1038035
SRR035090.236153
454 Sequencing (SRP001811)
147
74
-
Thr
GGT
[SRA]
>SRA1038150
SRR035090.254382
454 Sequencing (SRP001811)
132
205
+
Thr
GGT
[SRA]
>SRA1038154
SRR035090.255300
454 Sequencing (SRP001811)
17
90
+
Thr
GGT
[SRA]
>SRA1038176
SRR035090.258800
454 Sequencing (SRP001811)
400
327
-
Thr
GGT
[SRA]
>SRA1038436
SRR035090.305016
454 Sequencing (SRP001811)
301
228
-
Thr
GGT
[SRA]
>SRA1038444
SRR035090.305700
454 Sequencing (SRP001811)
132
205
+
Thr
GGT
[SRA]
>SRA1038554
SRR035090.326362
454 Sequencing (SRP001811)
280
207
-
Thr
GGT
[SRA]
>SRA1038702
SRR035090.352109
454 Sequencing (SRP001811)
400
327
-
Thr
GGT
[SRA]
>SRA1038869
SRR035090.384988
454 Sequencing (SRP001811)
42
115
+
Thr
GGT
[SRA]
>SRA1038906
SRR035090.391889
454 Sequencing (SRP001811)
90
163
+
Thr
GGT
[SRA]
>SRA1039073
SRR035090.419604
454 Sequencing (SRP001811)
132
205
+
Thr
GGT
[SRA]
>SRA1039095
SRR035090.423555
454 Sequencing (SRP001811)
8
81
+
Thr
GGT
[SRA]
>SRA1039273
SRR035090.455608
454 Sequencing (SRP001811)
95
168
+
Thr
GGT
[SRA]
>SRA1039381
SRR035090.480843
454 Sequencing (SRP001811)
427
354
-
Thr
GGT
[SRA]
>SRA1039534
SRR035090.509368
454 Sequencing (SRP001811)
103
30
-
Thr
GGT
[SRA]
>SRA1039557
SRR035090.516045
454 Sequencing (SRP001811)
34
107
+
Thr
GGT
[SRA]
>SRA1039592
SRR035090.522699
454 Sequencing (SRP001811)
12
85
+
Thr
GGT
[SRA]
>SRA1039681
SRR035090.543338
454 Sequencing (SRP001811)
35
108
+
Thr
GGT
[SRA]
>SRA1039684
SRR035090.544349
454 Sequencing (SRP001811)
34
107
+
Thr
GGT
[SRA]
>SRA1039814
SRR035090.576203
454 Sequencing (SRP001811)
34
107
+
Thr
GGT
[SRA]
>SRA1039820
SRR035090.577972
454 Sequencing (SRP001811)
346
273
-
Thr
GGT
[SRA]
>SRA1039921
SRR035090.602769
454 Sequencing (SRP001811)
46
119
+
Thr
GGT
[SRA]
>SRA1042508
SRR035091.400276
454 Sequencing (SRP001812)
54
127
+
Thr
GGT
[SRA]
>SRA1046202
SRR035093.253138
454 Sequencing (SRP001814)
243
316
+
Thr
GGT
[SRA]
>SRA1047311
SRR035093.507441
454 Sequencing (SRP001814)
367
294
-
Thr
GGT
[SRA]
>SRA1051991
SRR035098.120491
454 Sequencing (SRP001819)
391
318
-
Thr
GGT
[SRA]
>SRA1053923
SRR035099.1654
454 Sequencing (SRP001820)
104
177
+
Thr
GGT
[SRA]
>SRA1053957
SRR035099.16422
454 Sequencing (SRP001820)
280
205
-
Thr
GGT
[SRA]
>SRA1054176
SRR035099.76427
454 Sequencing (SRP001820)
267
194
-
Thr
GGT
[SRA]
>SRA1054359
SRR035099.115116
454 Sequencing (SRP001820)
263
336
+
Thr
GGT
[SRA]
>SRA1054376
SRR035099.118584
454 Sequencing (SRP001820)
164
91
-
Thr
GGT
[SRA]
>SRA1054529
SRR035099.156388
454 Sequencing (SRP001820)
71
144
+
Thr
GGT
[SRA]
>SRA1054531
SRR035099.156465
454 Sequencing (SRP001820)
84
159
+
Thr
GGT
[SRA]
>SRA1054548
SRR035099.159830
454 Sequencing (SRP001820)
414
341
-
Thr
GGT
[SRA]
>SRA1054564
SRR035099.164290
454 Sequencing (SRP001820)
322
395
+
Thr
GGT
[SRA]
>SRA1054592
SRR035099.169747
454 Sequencing (SRP001820)
257
184
-
Thr
GGT
[SRA]
>SRA1054610
SRR035099.172210
454 Sequencing (SRP001820)
124
51
-
Thr
GGT
[SRA]
>SRA1054650
SRR035099.181707
454 Sequencing (SRP001820)
294
367
+
Thr
GGT
[SRA]
>SRA1054652
SRR035099.181905
454 Sequencing (SRP001820)
214
141
-
Thr
GGT
[SRA]
>SRA1054659
SRR035099.182850
454 Sequencing (SRP001820)
317
244
-
Thr
GGT
[SRA]
>SRA1054685
SRR035099.188520
454 Sequencing (SRP001820)
263
336
+
Thr
GGT
[SRA]
>SRA1054700
SRR035099.190338
454 Sequencing (SRP001820)
130
57
-
Thr
GGT
[SRA]
>SRA1054747
SRR035099.205446
454 Sequencing (SRP001820)
427
354
-
Thr
GGT
[SRA]
>SRA1054760
SRR035099.207667
454 Sequencing (SRP001820)
393
466
+
Thr
GGT
[SRA]
>SRA1054845
SRR035099.228704
454 Sequencing (SRP001820)
189
116
-
Thr
GGT
[SRA]
>W1610721345
LMBR01000100
Chlorobiota
Chlorobium limicola [LMBR]
4041
3968
-
Thr
GGT
[ENA]
¡û
>W1610947178
LUZT01000005
Chlorobiota
Chlorobiales bacterium Clorobi_01 [LUZT]
506452
506377
-
Thr
GGT
[ENA]
¡û
Identical group No.453537 (9 seq.)
>WENV170621826
FUWD013074837
[FUWD] metagenome; unknown
835
908
+
Thr
GGT
[ENA]
¢þ
>WENV170630027
FUWD013290388
[FUWD] metagenome; unknown
835
908
+
Thr
GGT
[ENA]
¢þ
>SRA1030732
SRR035087.322289
454 Sequencing (SRP001808)
165
238
+
Thr
GGT
[SRA]
>SRA1031259
SRR035087.401567
454 Sequencing (SRP001808)
165
238
+
Thr
GGT
[SRA]
>SRA1031296
SRR035087.406950
454 Sequencing (SRP001808)
179
252
+
Thr
GGT
[SRA]
>SRA1034001
SRR035088.441049
454 Sequencing (SRP001809)
122
195
+
Thr
GGT
[SRA]
>SRA1034520
SRR035089.114551
454 Sequencing (SRP001810)
74
1
-
Thr
GGT
[SRA]
>SRA1035715
SRR035089.359796
454 Sequencing (SRP001810)
197
124
-
Thr
GGT
[SRA]
>SRA1048330
SRR035094.148712
454 Sequencing (SRP001815)
460
533
+
Thr
GGT
[SRA]
Identical group No.453780 (9 seq.)
>WENV170624730
FUWD013185793
[FUWD] metagenome; unknown
883
808
-
Thr
GGT
[ENA]
¢þ
>WENV170633010
FUWD013389969
[FUWD] metagenome; unknown
883
808
-
Thr
GGT
[ENA]
¢þ
>SRA1029699
SRR035087.166519
454 Sequencing (SRP001808)
413
488
+
Thr
GGT
[SRA]
>SRA1031809
SRR035087.493299
454 Sequencing (SRP001808)
451
376
-
Thr
GGT
[SRA]
>SRA1032855
SRR035088.116331
454 Sequencing (SRP001809)
61
136
+
Thr
GGT
[SRA]
>SRA1033969
SRR035088.426330
454 Sequencing (SRP001809)
230
155
-
Thr
GGT
[SRA]
>SRA1035955
SRR035089.412498
454 Sequencing (SRP001810)
227
302
+
Thr
GGT
[SRA]
>SRA1036057
SRR035089.435213
454 Sequencing (SRP001810)
82
7
-
Thr
GGT
[SRA]
>SRA1036460
SRR035089.527710
454 Sequencing (SRP001810)
360
435
+
Thr
GGT
[SRA]
Identical group No.463963 (4 seq.)
>W131162446
AQYX01000021
Atribacterota
Atribacteria bacterium SCGC AAA252-M02 OP9 bacterium SCGC AAA252-M02 [AQYX]
1187
1262
+
Thr
GGT
[ENA]
¡û
>W131193786
ASPB01000007
Atribacterota
Atribacteria bacterium SCGC AB-164-D21 OP9 bacterium SCGC AB-164-D21 [ASPB]
30358
30283
-
Thr
GGT
[ENA]
¡û
>W131193810
ASPC01000051
Atribacterota
Atribacteria bacterium SCGC AAA255-N14 OP9 bacterium SCGC AAA255-N14 [ASPC]
6429
6354
-
Thr
GGT
[ENA]
¡û
>SRA1032858
SRR035088.116944
454 Sequencing (SRP001809)
130
55
-
Thr
GGT
[SRA]
Identical group No.484386 (4 seq.)
>WENV170612214
FUWD012537502
[FUWD] metagenome; unknown
222
147
-
Thr
GGT
[ENA]
¢þ
>SRA1030984
SRR035087.357317
454 Sequencing (SRP001808)
160
235
+
Thr
GGT
[SRA]
>SRA1033802
SRR035088.359593
454 Sequencing (SRP001809)
222
147
-
Thr
GGT
[SRA]
>W1511608661
LCEG01000001
Unclassified
candidate division TM6 bacterium GW2011_GWE2_42_60 [LCEG]
124631
124706
+
Thr
GGT
[ENA]
¡û
Identical group No.548723 (4 seq.)
>WENV170621511
FUWD013061787
[FUWD] metagenome; unknown
1431
1356
-
Thr
GGT
[ENA]
¢þ
>WENV170629694
FUWD013277910
[FUWD] metagenome; unknown
1431
1356
-
Thr
GGT
[ENA]
¢þ
>SRA1033537
SRR035088.280995
454 Sequencing (SRP001809)
416
341
-
Thr
GGT
[SRA]
>SRA1034087
SRR035088.481581
454 Sequencing (SRP001809)
119
194
+
Thr
GGT
[SRA]
Identical group No.612362 (1 seq.)
>SRA1033168
SRR035088.188528
454 Sequencing (SRP001809)
352
424
+
Thr
GGT
[SRA]
Identical group No.612365 (1 seq.)
>SRA1033222
SRR035088.199615
454 Sequencing (SRP001809)
34
109
+
Thr
GGT
[SRA]
Identical group No.612389 (1 seq.)
>SRA1033716
SRR035088.334381
454 Sequencing (SRP001809)
10
83
+
Thr
GGT
[SRA]
Identical group No.612408 (1 seq.)
>SRA1034008
SRR035088.444480
454 Sequencing (SRP001809)
4
77
+
Thr
GGT
[SRA]
Identical group No.654295 (35 seq.)
>C171072572
CP018091
Cyanobacteriota
Synechococcus sp. SynAce01 [CP018091]
767828
767899
+
Thr
GGT
-
¡û
>WENV012784
AACY020348980
Marine microbial communities from Global Ocean Sampling (GOS)
1712
1638
-
Thr
GGT
[ENA]
>C025244
CT978603
Cyanobacteriota
Synechococcus sp. RCC307 [CT978603]
429237
429163
-
Thr
GGT
[Ensembl]
¡û
>WENV180364503
OBOA01017868
[OBOA] marine metagenome; Deep Chlorophyll Maximum
278
349
+
Thr
GGT
[ENA]
¢þ
>WENV180381594
OBOS01003600
[OBOS] marine metagenome; ENVO 00002150
958
887
-
Thr
GGT
[ENA]
¢þ
>W141219992
AZXL01000015
Cyanobacteriota
Synechococcus sp. CC9616 [AZXL]
138530
138456
-
Thr
GGT
[ENA]
¡û
>WENV020154
AACY020548372
Marine microbial communities from Global Ocean Sampling (GOS)
55
129
+
Thr
GGT
[ENA]
>WENV170614939
FUWD012844726
[FUWD] metagenome; unknown
26123
26194
+
Thr
GGT
[ENA]
¢þ
>WENV170789064
MDSV01044433
[MDSV] marine metagenome; seawater
50
124
+
Thr
GGT
[ENA]
¢þ
>WENV170826486
MDSY01111664
[MDSY] marine metagenome; seawater
143
217
+
Thr
GGT
[ENA]
¢þ
>WENV170860869
MDTB01056685
[MDTB] marine metagenome; seawater
53
127
+
Thr
GGT
[ENA]
¢þ
>WENV170870381
MDTB01191075
[MDTB] marine metagenome; seawater
3670
3599
-
Thr
GGT
[ENA]
¢þ
>WENV170872256
MDTB01216112
[MDTB] marine metagenome; seawater
4179
4105
-
Thr
GGT
[ENA]
¢þ
>WENV025856
AACY020920227
Marine microbial communities from Global Ocean Sampling (GOS)
911
837
-
Thr
GGT
[ENA]
>W1810387027
PXVC01000020
Cyanobacteriota
Synechococcus lacustris Tous [PXVC]
12941
12870
-
Thr
GGT
[ENA]
¡û
>W1810524723
QCMM01000002
Cyanobacteriota
Synechococcus sp. AG-420-M02 [QCMM]
2984
2913
-
Thr
GGT
[ENA]
¡û
>SRA1025908
SRR035085.106832
454 Sequencing (SRP001806)
47
118
+
Thr
GGT
[SRA]
>SRA1027899
SRR035086.214232
454 Sequencing (SRP001807)
303
232
-
Thr
GGT
[SRA]
>SRA1028095
SRR035086.257816
454 Sequencing (SRP001807)
321
392
+
Thr
GGT
[SRA]
>SRA1028627
SRR035086.377916
454 Sequencing (SRP001807)
267
196
-
Thr
GGT
[SRA]
>SRA1033484
SRR035088.270220
454 Sequencing (SRP001809)
199
270
+
Thr
GGT
[SRA]
>SRA1051644
SRR035098.46116
454 Sequencing (SRP001819)
35
106
+
Thr
GGT
[SRA]
>SRA1051729
SRR035098.64812
454 Sequencing (SRP001819)
413
484
+
Thr
GGT
[SRA]
>SRA1051790
SRR035098.76856
454 Sequencing (SRP001819)
104
33
-
Thr
GGT
[SRA]
>SRA1051957
SRR035098.114033
454 Sequencing (SRP001819)
447
376
-
Thr
GGT
[SRA]
>SRA1052294
SRR035098.176775
454 Sequencing (SRP001819)
243
314
+
Thr
GGT
[SRA]
>SRA1052637
SRR035098.241029
454 Sequencing (SRP001819)
116
187
+
Thr
GGT
[SRA]
>SRA1053076
SRR035098.331589
454 Sequencing (SRP001819)
448
377
-
Thr
GGT
[SRA]
>SRA1053131
SRR035098.345530
454 Sequencing (SRP001819)
116
187
+
Thr
GGT
[SRA]
>SRA1053429
SRR035098.403433
454 Sequencing (SRP001819)
160
231
+
Thr
GGT
[SRA]
>SRA1053490
SRR035098.417506
454 Sequencing (SRP001819)
104
33
-
Thr
GGT
[SRA]
>SRA1053696
SRR035098.469449
454 Sequencing (SRP001819)
143
72
-
Thr
GGT
[SRA]
>SRA1053729
SRR035098.478364
454 Sequencing (SRP001819)
95
166
+
Thr
GGT
[SRA]
>SRA1053832
SRR035098.507410
454 Sequencing (SRP001819)
160
231
+
Thr
GGT
[SRA]
>WENV052605
AACY023038374
Marine microbial communities from Global Ocean Sampling (GOS)
488
414
-
Thr
GGT
[ENA]
Identical group No.686059 (20 seq.)
>WENV180080220
MPMB02213509
[MPMB] marine metagenome; 300 m water sample filtered on 0.2 um supor filter
419
491
+
Thr
GGT
[ENA]
¢þ
>WENV183802907
PVBE010796474
[PVBE] marine metagenome; water
13500
13428
-
Thr
GGT
[ENA]
¢þ
>WENV170203989
CEPS01100129
[CEPS] marine metagenome genome assembly TARA_038_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
355
283
-
Thr
GGT
[ENA]
¢þ
>WENV170383121
CETX01076346
[CETX] marine metagenome genome assembly TARA_138_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
466
538
+
Thr
GGT
[ENA]
¢þ
>WENV170398817
CEUD01312498
[CEUD] marine metagenome genome assembly TARA_137_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
22
94
+
Thr
GGT
[ENA]
¢þ
>WENV170572736
FLOH01001235
[FLOH] marine metagenome; water
30299
30225
-
Thr
GGT
[ENA]
¢þ
>WENV170616558
FUWD012891056
[FUWD] metagenome; unknown
343
415
+
Thr
GGT
[ENA]
¢þ
>WENV170617826
FUWD012937803
[FUWD] metagenome; unknown
362
288
-
Thr
GGT
[ENA]
¢þ
>WENV170620140
FUWD013026425
[FUWD] metagenome; unknown
331
403
+
Thr
GGT
[ENA]
¢þ
>WENV170624422
FUWD013181327
[FUWD] metagenome; unknown
94
168
+
Thr
GGT
[ENA]
¢þ
>WENV170628276
FUWD013244266
[FUWD] metagenome; unknown
331
403
+
Thr
GGT
[ENA]
¢þ
>WENV170632708
FUWD013386310
[FUWD] metagenome; unknown
94
168
+
Thr
GGT
[ENA]
¢þ
>SRA1032566
SRR035088.47772
454 Sequencing (SRP001809)
117
43
-
Thr
GGT
[SRA]
>SRA1036823
SRR035090.14683
454 Sequencing (SRP001811)
346
420
+
Thr
GGT
[SRA]
>SRA1036853
SRR035090.24995
454 Sequencing (SRP001811)
346
420
+
Thr
GGT
[SRA]
>SRA1037844
SRR035090.203919
454 Sequencing (SRP001811)
94
20
-
Thr
GGT
[SRA]
>SRA1039547
SRR035090.513013
454 Sequencing (SRP001811)
368
294
-
Thr
GGT
[SRA]
>SRA1048070
SRR035094.102533
454 Sequencing (SRP001815)
378
304
-
Thr
GGT
[SRA]
>SRA1049545
SRR035095.94392
454 Sequencing (SRP001816)
183
257
+
Thr
GGT
[SRA]
>SRA1054280
SRR035099.99445
454 Sequencing (SRP001820)
104
178
+
Thr
GGT
[SRA]
Identical group No.751602 (1 seq.)
>SRA1032922
SRR035088.129737
454 Sequencing (SRP001809)
302
230
-
Thr
GGT
[SRA]
Identical group No.751609 (1 seq.)
>SRA1033105
SRR035088.175050
454 Sequencing (SRP001809)
337
411
+
Thr
GGT
[SRA]
Identical group No.751610 (1 seq.)
>SRA1033127
SRR035088.179779
454 Sequencing (SRP001809)
5
77
+
Thr
GGT
[SRA]
Identical group No.805257 (3 seq.)
>WENV170612195
FUWD012530712
[FUWD] metagenome; unknown
114
187
+
Thr
GGT
[ENA]
¢þ
>SRA1033294
SRR035088.216822
454 Sequencing (SRP001809)
200
127
-
Thr
GGT
[SRA]
>SRA1033429
SRR035088.254954
454 Sequencing (SRP001809)
116
189
+
Thr
GGT
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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