tRNA genes clustered and arranged according to each identical group

Line Islands Corals, viral fraction from water of Palmyra (SRP000141)

Anticodon = TTT

HIT: 8 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.299996 (21 seq.)
>ENV08000926 ABML01216631 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 6 81 + Lys TTT [ENA]
>WENV170136763 CENV01072445 [CENV] marine metagenome genome assembly TARA_031_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 350 275 - Lys TTT [ENA]
>WENV170148649 CEOA01010848 [CEOA] marine metagenome genome assembly TARA_032_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 273 198 - Lys TTT [ENA]
>WENV170249098 CEQR01087232 [CEQR] marine metagenome genome assembly TARA_070_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 472 397 - Lys TTT [ENA]
>WENV170282883 CERT01005366 [CERT] marine metagenome genome assembly TARA_065_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 312 387 + Lys TTT [ENA]
>WENV170332750 CESX01000857 [CESX] marine metagenome genome assembly TARA_109_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 139 214 + Lys TTT [ENA]
>WENV170342466 CETD01127627 [CETD] marine metagenome genome assembly TARA_110_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1928 2003 + Lys TTT [ENA]
>WENV170364987 CETN01000284 [CETN] marine metagenome genome assembly TARA_122_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1338 1263 - Lys TTT [ENA]
>WENV170365259 CETN01043547 [CETN] marine metagenome genome assembly TARA_122_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 699 774 + Lys TTT [ENA]
>WENV170423884 CEUO01038923 [CEUO] marine metagenome genome assembly TARA_124_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 149 224 + Lys TTT [ENA]
>WENV170424033 CEUO01058755 [CEUO] marine metagenome genome assembly TARA_124_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 184 259 + Lys TTT [ENA]
>WENV170424084 CEUO01062467 [CEUO] marine metagenome genome assembly TARA_124_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 276 201 - Lys TTT [ENA]
>WENV170435994 CEUT01012294 [CEUT] marine metagenome genome assembly TARA_125_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 516 441 - Lys TTT [ENA]
>WENV170436262 CEUT01035398 [CEUT] marine metagenome genome assembly TARA_125_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 154 229 + Lys TTT [ENA]
>WENV170443980 CEUX01038259 [CEUX] marine metagenome genome assembly TARA_123_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 497 572 + Lys TTT [ENA]
>WENV170458197 CEVB01047407 [CEVB] marine metagenome genome assembly TARA_124_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 604 529 - Lys TTT [ENA]
>WENV170519004 CEWE01192733 [CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 293 218 - Lys TTT [ENA]
>WENV170586494 FUFK010422145 [FUFK] metagenome; unknown 597 522 - Lys TTT [ENA]
>WENV170603878 FUWD010342181 [FUWD] metagenome; unknown 333 408 + Lys TTT [ENA]
>WENV170605819 FUWD010550158 [FUWD] metagenome; unknown 97 22 - Lys TTT [ENA]
>SRA1000913 SRR001049.127086 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 6 81 + Lys TTT [SRA]
Identical group No.314379 (6 seq.)
>WENV183701195 PDMW01302800 [PDMW] marine metagenome; viruses from water sample; < 0.22 micron filtered, nuclease treated, low buoyant density 313 386 + Lys TTT [ENA]
>ENV08000889 ABML01034272 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 98 25 - Lys TTT [ENA]
>WENV170384677 CETY01006405 [CETY] marine metagenome genome assembly TARA_133_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 155 82 - Lys TTT [ENA]
>WENV170436360 CEUT01044683 [CEUT] marine metagenome genome assembly TARA_125_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 263 190 - Lys TTT [ENA]
>WENV170883204 MDTC01161796 [MDTC] marine metagenome; seawater 1598 1525 - Lys TTT [ENA]
>SRA1000954 SRR001049.295692 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 98 25 - Lys TTT [SRA]
Identical group No.314940 (14 seq.)
>ENV08000431 ABMD01058081 viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Christmas Atoll (Kirtimati; Northern Line Islands) 35 110 + Lys TTT [ENA]
>ENV08000880 ABML01010493 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 112 37 - Lys TTT [ENA]
>ENV08000882 ABML01012368 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 10 85 + Lys TTT [ENA]
>ENV08000887 ABML01028340 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 106 31 - Lys TTT [ENA]
>WENV170149043 CEOA01098493 [CEOA] marine metagenome genome assembly TARA_032_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 170 95 - Lys TTT [ENA]
>WENV170153075 CEOF01052396 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 553 478 - Lys TTT [ENA]
>WENV170260684 CERA01062819 [CERA] marine metagenome genome assembly TARA_068_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 354 279 - Lys TTT [ENA]
>WENV170578196 FUFK010004967 [FUFK] metagenome; unknown 159 234 + Lys TTT [ENA]
>WENV170862240 MDTB01075048 [MDTB] marine metagenome; seawater 78 3 - Lys TTT [ENA]
>SRA1000404 SRR001042.65706 Line Islands Corals, viral fraction of Christmas Atoll (SRP000134) 35 110 + Lys TTT [SRA]
>SRA1000506 SRR001042.284615 Line Islands Corals, viral fraction of Christmas Atoll (SRP000134) 35 110 + Lys TTT [SRA]
>SRA1000899 SRR001049.41477 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 106 31 - Lys TTT [SRA]
>SRA1000937 SRR001049.212360 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 10 85 + Lys TTT [SRA]
>SRA1000940 SRR001049.239204 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 112 37 - Lys TTT [SRA]
Identical group No.333443 (10 seq.)
>ENV08000929 ABML01255524 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 96 24 - Lys TTT [ENA]
>ENV08000957 ABMN01078405 marine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands) 87 15 - Lys TTT [ENA]
>ENV08000958 ABMN01080274 marine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands) 111 39 - Lys TTT [ENA]
>WENV170117218 CENI01078194 [CENI] marine metagenome genome assembly TARA_023_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 655 727 + Lys TTT [ENA]
>WENV170277105 CERP01010820 [CERP] marine metagenome genome assembly TARA_067_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1007 1079 + Lys TTT [ENA]
>WENV170458600 CEVB01127084 [CEVB] marine metagenome genome assembly TARA_124_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 467 395 - Lys TTT [ENA]
>WENV170536236 CEWP01163972 [CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 456 528 + Lys TTT [ENA]
>SRA1000936 SRR001049.211025 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 96 24 - Lys TTT [SRA]
>SRA1001000 SRR001051.113931 Line Islands Corals viral fraction from water of Fanning (SRP000143) 87 15 - Lys TTT [SRA]
>SRA1001011 SRR001051.185368 Line Islands Corals viral fraction from water of Fanning (SRP000143) 111 39 - Lys TTT [SRA]
Identical group No.340495 (9 seq.)
>ENV08000911 ABML01139996 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 97 22 - Lys TTT [ENA]
>WENV170186621 CEPA01065901 [CEPA] marine metagenome genome assembly TARA_052_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4581 4656 + Lys TTT [ENA]
>WENV170365356 CETN01062302 [CETN] marine metagenome genome assembly TARA_122_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 315 240 - Lys TTT [ENA]
>WENV170441441 CEUV01158550 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 345 420 + Lys TTT [ENA]
>WENV170457964 CEVB01013866 [CEVB] marine metagenome genome assembly TARA_124_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 891 816 - Lys TTT [ENA]
>WENV170845857 MDTA01031850 [MDTA] marine metagenome; seawater 7692 7767 + Lys TTT [ENA]
>WENV170900595 MDTD01156524 [MDTD] marine metagenome; seawater 2686 2761 + Lys TTT [ENA]
>WENV170901822 MDTD01176377 [MDTD] marine metagenome; seawater 5751 5826 + Lys TTT [ENA]
>SRA1000919 SRR001049.141360 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 97 22 - Lys TTT [SRA]
Identical group No.372407 (2 seq.)
>ENV08000907 ABML01114802 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 106 34 - Lys TTT [ENA]
>SRA1000898 SRR001049.31117 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 106 34 - Lys TTT [SRA]
Identical group No.372409 (2 seq.)
>ENV08000919 ABML01164913 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 106 34 - Lys TTT [ENA]
>SRA1000946 SRR001049.265329 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 106 34 - Lys TTT [SRA]
Identical group No.410682 (7 seq.)
>ENV08000913 ABML01150282 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 107 36 - Lys TTT [ENA]
>WENV170251129 CEQT01060532 [CEQT] marine metagenome genome assembly TARA_072_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1445 1373 - Lys TTT [ENA]
>WENV170267304 CERF01047256 [CERF] marine metagenome genome assembly TARA_072_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 474 402 - Lys TTT [ENA]
>WENV170268941 CERH01011383 [CERH] marine metagenome genome assembly TARA_072_MES_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1141 1069 - Lys TTT [ENA]
>WENV170444058 CEUX01049112 [CEUX] marine metagenome genome assembly TARA_123_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 290 218 - Lys TTT [ENA]
>SRA1000909 SRR001049.93677 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 107 36 - Lys TTT [SRA]
>SRA1000939 SRR001049.225728 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 107 36 - Lys TTT [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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