tRNA genes clustered and arranged according to each identical group

Synergistota

Anticodon = CCT

HIT: 21 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.301519 (16 seq.)
>W1711137593 LVBP01000229 Synergistota Synergistales bacterium Syner_02 [LVBP] 11706 11782 + Arg CCT [ENA] ¡û
>W1711318179 MAYB01000004 Alphaproteobacteria Nitratireductor aquibiodomus [MAYB] 607474 607398 - Arg CCT [ENA] ¡û
>W131046298 AMSI01000008 Alphaproteobacteria Nitratireductor indicus C115 [AMSI] 118992 118916 - Arg CCT [ENA] ¡û
>W141229366 BAMP01000026 Alphaproteobacteria Nitratireductor aquibiodomus JCM 21793 [BAMP] 43115 43039 - Arg CCT [ENA] ¡û
>WENV170853517 MDTA01171197 [MDTA] marine metagenome; seawater 4574 4650 + Arg CCT [ENA] ¢þ
>WENV170964008 MRWG01001916 [MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 10393 10469 + Arg CCT [ENA] ¢þ
>C181176128 CP029208 Alphaproteobacteria Nitratireductor sp. OM-1 [CP029208] 759417 759493 + Arg CCT - ¡û
>W141712282 JMQM01000002 Alphaproteobacteria Nitratireductor basaltis [JMQM] 662797 662873 + Arg CCT [ENA] ¡û
>W1910859313 NBYO01000001 Alphaproteobacteria Notoacmeibacter marinus XMTR2A4 [NBYO] 1489701 1489625 - Arg CCT [ENA] ¡û
>W1810592075 QFWV01000001 Alphaproteobacteria Oceaniradius stylonematis StC1 [QFWV] 370457 370381 - Arg CCT [ENA] ¡û
>W1810625988 QHKP01000004 Alphaproteobacteria Notoacmeibacter marinus HMA008 [QHKP] 87567 87643 + Arg CCT [ENA] ¡û
>W121071503 AJXZ01000055 Alphaproteobacteria Nitratireductor aquibiodomus RA22 [AJXZ] 31181 31105 - Arg CCT [ENA] ¡û
>W1610948713 LVBP01000229 Synergistota Synergistales bacterium Syner_02 [LVBP] 11706 11782 + Arg CCT [ENA] ¡û
>W1611061597 MAYB01000004 Alphaproteobacteria Nitratireductor aquibiodomus [MAYB] 607474 607398 - Arg CCT [ENA] ¡û
>W1710535288 FNSL01000001 Alphaproteobacteria Nitratireductor aquibiodomus ES.061 [FNSL] 2052562 2052638 + Arg CCT [ENA] ¡û
>W1710574065 FOXZ01000004 Alphaproteobacteria Nitratireductor indicus [FOXZ] 133279 133355 + Arg CCT [ENA] ¡û
Identical group No.302263 (5 seq.)
>WENV170676934 LDZS01003235 [LDZS] terrestrial metagenome; oil reservoir sample K3 9200 9276 + Arg CCT [ENA] ¢þ
>C121008078 CP003198 Synergistota Acetomicrobium mobile DSM 13181 [CP003198] 895986 895910 - Arg CCT [Ensembl] ¡û
>W1610613302 LGFQ01000055 Synergistota Synergistales bacterium 54_24 [LGFQ] 9200 9276 + Arg CCT [ENA] ¡û
>W1710594052 FSQZ01000001 Synergistota Acetomicrobium flavidum [FSQZ] 191022 191098 + Arg CCT [ENA] ¡û
>W1710734509 LGFQ01000055 Synergistota Synergistales bacterium 54_24 [LGFQ] 9200 9276 + Arg CCT [ENA] ¡û
Identical group No.304068 (1 seq.)
>W1712039371 NFJQ01000007 Synergistota Cloacibacillus sp. An23 [NFJQ] 144622 144698 + Arg CCT [ENA] ¡û
Identical group No.307532 (6 seq.)
>W141701193 JMKI01000009 Synergistota Synergistes jonesii [JMKI] 1177 1101 - Arg CCT [ENA] ¡û
>W1710629236 JPZQ01000010 Synergistota Synergistes jonesii [JPZQ] 286 210 - Arg CCT [ENA] ¡û
>W1710629280 JPZR01000009 Synergistota Synergistes jonesii [JPZR] 287 211 - Arg CCT [ENA] ¡û
>W1710629322 JPZS01000008 Synergistota Synergistes jonesii [JPZS] 286 210 - Arg CCT [ENA] ¡û
>W1710631838 JQEK01000028 Synergistota Synergistes jonesii [JQEK] 16020 16096 + Arg CCT [ENA] ¡û
>W1710631870 JQEL01000009 Synergistota Synergistes jonesii [JQEL] 286 210 - Arg CCT [ENA] ¡û
Identical group No.314430 (8 seq.)
>W1711744501 MUHX01000020 Synergistota Pyramidobacter sp. C12-8 [MUHX] 22634 22558 - Arg CCT [ENA] ¡û
>WENV181638736 OGNC01011095 [OGNC] metagenome; Human gut stool 1445 1369 - Arg CCT [ENA] ¢þ
>WENV181973449 OHAA01049112 [OHAA] human gut metagenome; faeces 303 227 - Arg CCT [ENA] ¢þ
>WENV181989134 OHAO01003472 [OHAO] human gut metagenome; faeces 2916 2992 + Arg CCT [ENA] ¢þ
>WENV183484249 OMFO01007227 [OMFO] human gut metagenome; feces 220 296 + Arg CCT [ENA] ¢þ
>WENV183763976 PPYE01311392 [PPYE] human gut metagenome; stool from patient with ulcerative colitis 9302 9378 + Arg CCT [ENA] ¢þ
>W10113026 ADFP01000055 Synergistota Pyramidobacter piscolens W5455 [ADFP] 2977 3053 + Arg CCT [ENA] ¡û
>W11116253 ADFP01000055 Synergistota Pyramidobacter piscolens W5455 [ADFP] 2977 3053 + Arg CCT [ENA] ¡û
Identical group No.330349 (10 seq.)
>C171050522 CP016757 Synergistota Cloacibacillus porcorum CL-84 [CP016757] 110335 110411 + Arg CCT - ¡û
>WENV181614355 OGLV01048918 [OGLV] metagenome; Human gut stool 610 534 - Arg CCT [ENA] ¢þ
>WENV181908770 OGYB01000617 [OGYB] human gut metagenome; faeces 9900 9824 - Arg CCT [ENA] ¢þ
>WENV181915470 OGYF01007516 [OGYF] human gut metagenome; faeces 2253 2329 + Arg CCT [ENA] ¢þ
>WENV182221023 OHQS01032154 [OHQS] human gut metagenome; feces 19 95 + Arg CCT [ENA] ¢þ
>WENV182274880 OHUK01019380 [OHUK] human gut metagenome; feces 832 756 - Arg CCT [ENA] ¢þ
>WENV182538201 OIXH01051492 [OIXH] human gut metagenome; faeces 129 53 - Arg CCT [ENA] ¢þ
>WENV183039532 OLGB01008551 [OLGB] human gut metagenome; faeces 5453 5377 - Arg CCT [ENA] ¢þ
>W141452022 JFBR01000001 Synergistota Cloacibacillus evryensis DSM 19522 [JFBR] 44047 43971 - Arg CCT [ENA] ¡û
>W121000456 ACUH01000002 Synergistota Synergistes sp. 3_1_syn1 [ACUH] 10149 10073 - Arg CCT [ENA] ¡û
Identical group No.352497 (1 seq.)
>W11138606 AEIV01000002 Synergistota Aminomonas paucivorans DSM 12260 [AEIV] 74646 74722 + Arg CCT [ENA] ¡û
Identical group No.370679 (6 seq.)
>WENV170690154 LFRM01327453 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 642 566 - Arg CCT [ENA] ¢þ
>WENV170724396 LSQX01303912 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 7708 7784 + Arg CCT [ENA] ¢þ
>WENV170725306 LSQX01338052 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 815 739 - Arg CCT [ENA] ¢þ
>WENV170727099 LSQX01404838 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 8996 9072 + Arg CCT [ENA] ¢þ
>W09126602 ACJX01000116 Synergistota Acetomicrobium hydrogeniformans ATCC BAA-1850 [ACJX] 118 42 - Arg CCT [ENA] ¡û
>W1710530829 FNPD01000003 Synergistota Acetomicrobium thermoterrenum DSM 13490 [FNPD] 186732 186656 - Arg CCT [ENA] ¡û
Identical group No.381606 (2 seq.)
>W1711137636 LVBQ01000140 Synergistota Synergistales bacterium Syner_03 [LVBQ] 6026 5950 - Arg CCT [ENA] ¡û
>W1610948756 LVBQ01000140 Synergistota Synergistales bacterium Syner_03 [LVBQ] 6026 5950 - Arg CCT [ENA] ¡û
Identical group No.402117 (1 seq.)
>W09126615 ACJX01000145 Synergistota Acetomicrobium hydrogeniformans ATCC BAA-1850 [ACJX] 321 245 - Arg CCT [ENA] ¡û
Identical group No.417202 (4 seq.)
>WENV181409359 OGCI01000124 [OGCI] hot springs metagenome; Hot spring water 26036 25960 - Arg CCT [ENA] ¢þ
>W09110155 ABUW01000007 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [ABUW] 69220 69296 + Arg CCT [ENA] ¡û
>C10113015 CP001818 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [CP001818] 1033275 1033199 - Arg CCT [Ensembl] ¡û
>W121031627 AHGV01000001 Synergistota Thermanaerovibrio velox DSM 12556 [AHGV] 857197 857273 + Arg CCT [ENA] ¡û
Identical group No.422778 (2 seq.)
>W141278978 JAFY01000007 Synergistota Aminiphilus circumscriptus DSM 16581 [JAFY] 838438 838362 - Arg CCT [ENA] ¡û
>W1610945975 LUYG01000159 Euryarchaeota Methanosarcinales archaeon Methan_03 [LUYG] 3289 3213 - Arg CCT [ENA] ¡û
Identical group No.461168 (9 seq.)
>WENV181230110 OFEK01000298 [OFEK] activated sludge metagenome; Anaerobic digester 4839 4914 + Arg CCT [ENA] ¢þ
>WENV183514356 OMKS01017006 [OMKS] sediment metagenome; hot spring sediment 3017 3092 + Arg CCT [ENA] ¢þ
>WENV170678342 LDZT01014015 [LDZT] terrestrial metagenome; oil reservoir sample SB1 76 1 - Arg CCT [ENA] ¢þ
>WENV170719649 LSQX01121978 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 56469 56544 + Arg CCT [ENA] ¢þ
>WENV170967223 MTKW01000525 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 113534 113609 + Arg CCT [ENA] ¢þ
>WENV170971699 MTKX01009951 [MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 9701 9626 - Arg CCT [ENA] ¢þ
>WENV170978114 MTKZ01041200 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 3241 3316 + Arg CCT [ENA] ¢þ
>W1610613694 LGGE01000008 Synergistota Synergistales bacterium 57_84 [LGGE] 76 1 - Arg CCT [ENA] ¡û
>W1710734847 LGGE01000008 Synergistota Synergistales bacterium 57_84 [LGGE] 76 1 - Arg CCT [ENA] ¡û
Identical group No.490527 (3 seq.)
>W1711629549 MPPC01000010 Synergistota Aminobacterium sp. EBM-42 [MPPC] 225364 225439 + Arg CCT [ENA] ¡û
>WENV170719193 LSQX01104951 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 265137 265212 + Arg CCT [ENA] ¢þ
>C10100327 CP001997 Synergistota Aminobacterium colombiense DSM 12261 [CP001997] 1004754 1004679 - Arg CCT [Ensembl] ¡û
Identical group No.500427 (5 seq.)
>WENV183515202 OMKS01050609 [OMKS] sediment metagenome; hot spring sediment 972 1047 + Arg CCT [ENA] ¢þ
>WENV170679065 LDZU01006955 [LDZU] terrestrial metagenome; oil reservoir sample SB2 1964 1889 - Arg CCT [ENA] ¢þ
>C121005684 CP003096 Synergistota Thermovirga lienii DSM 17291 [CP003096] 983255 983330 + Arg CCT [Ensembl] ¡û
>W1610614512 LGHG01000206 Synergistota Synergistales bacterium 54_9 [LGHG] 1964 1889 - Arg CCT [ENA] ¡û
>W1710735493 LGHG01000206 Synergistota Synergistales bacterium 54_9 [LGHG] 1964 1889 - Arg CCT [ENA] ¡û
Identical group No.530886 (3 seq.)
>WENV180952122 ODUH01130412 [ODUH] human metagenome; G_DNA_Subgingival plaque 269 194 - Arg CCT [ENA] ¢þ
>WENV181081345 OEAS01182335 [OEAS] human metagenome; G_DNA_Supragingival plaque 250 325 + Arg CCT [ENA] ¢þ
>C161104046 FP929056 Synergistota Fretibacterium fastidiosum SGP1 [FP929056] 1053152 1053077 - Arg CCT - ¡û
Identical group No.551486 (3 seq.)
>W1711137569 LVBO01000398 Synergistota Synergistales bacterium Syner_01 [LVBO] 759 684 - Arg CCT [ENA] ¡û
>WENV180096734 MTBK01144849 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 67451 67526 + Arg CCT [ENA] ¢þ
>W1610948689 LVBO01000398 Synergistota Synergistales bacterium Syner_01 [LVBO] 759 684 - Arg CCT [ENA] ¡û
Identical group No.554137 (3 seq.)
>W141146874 AWWC01000028 Synergistota Jonquetella sp. BV3C21 [AWWC] 48553 48478 - Arg CCT [ENA] ¡û
>W09132962 ACOO02000018 Synergistota Jonquetella anthropi E3_33 E1 [ACOO] 28855 28930 + Arg CCT [ENA] ¡û
>W121017486 AGRU01000003 Synergistota Jonquetella anthropi DSM 22815 [AGRU] 189850 189925 + Arg CCT [ENA] ¡û
Identical group No.559287 (6 seq.)
>WENV183713273 PDWI01131848 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 1471 1396 - Arg CCT [ENA] ¢þ
>WENV183717645 PDWJ01001296 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 23752 23827 + Arg CCT [ENA] ¢þ
>WENV170655653 JTFN01055100 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 682 607 - Arg CCT [ENA] ¢þ
>WENV170656707 JTFO01035909 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 1566 1491 - Arg CCT [ENA] ¢þ
>W09108910 ABTR01000003 Synergistota Dethiosulfovibrio peptidovorans DSM 11002 [ABTR] 114239 114314 + Arg CCT [ENA] ¡û
>W1710608677 FXBB01000001 Synergistota Dethiosulfovibrio salsuginis [FXBB] 109326 109251 - Arg CCT [ENA] ¡û
Identical group No.589565 (5 seq.)
>W1711137587 LVBP01000145 Synergistota Synergistales bacterium Syner_02 [LVBP] 17501 17576 + Arg CCT [ENA] ¡û
>WENV181231824 OFEK01071014 [OFEK] activated sludge metagenome; Anaerobic digester 584 659 + Arg CCT [ENA] ¢þ
>WENV170671582 LAHU01095154 [LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from 211 136 - Arg CCT [ENA] ¢þ
>WENV170724719 LSQX01316244 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 7198 7123 - Arg CCT [ENA] ¢þ
>W1610948707 LVBP01000145 Synergistota Synergistales bacterium Syner_02 [LVBP] 17501 17576 + Arg CCT [ENA] ¡û
Identical group No.642158 (1 seq.)
>W141278996 JAFZ01000001 Synergistota Aminobacterium mobile DSM 12262 [JAFZ] 1200954 1201029 + Arg CCT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
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