tRNA genes clustered and arranged according to each identical group

Synergistota

Anticodon = CTC

HIT: 24 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.461201 (8 seq.)
>WENV170678363 LDZT01014054 [LDZT] terrestrial metagenome; oil reservoir sample SB1 3789 3714 - Glu CTC [ENA] ¢þ
>WENV170678631 LDZU01003441 [LDZU] terrestrial metagenome; oil reservoir sample SB2 5024 4949 - Glu CTC [ENA] ¢þ
>WENV170723333 LSQX01264786 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 12097 12172 + Glu CTC [ENA] ¢þ
>WENV170967348 MTKW01001001 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 99671 99746 + Glu CTC [ENA] ¢þ
>W1610613715 LGGE01000047 Synergistota Synergistales bacterium 57_84 [LGGE] 3789 3714 - Glu CTC [ENA] ¡û
>W1610614169 LGGV01000066 Synergistota Synergistales bacterium 58_81 [LGGV] 5024 4949 - Glu CTC [ENA] ¡û
>W1710734868 LGGE01000047 Synergistota Synergistales bacterium 57_84 [LGGE] 3789 3714 - Glu CTC [ENA] ¡û
>W1710735252 LGGV01000066 Synergistota Synergistales bacterium 58_81 [LGGV] 5024 4949 - Glu CTC [ENA] ¡û
Identical group No.473776 (14 seq.)
>W1711137616 LVBQ01000027 Synergistota Synergistales bacterium Syner_03 [LVBQ] 13950 13875 - Glu CTC [ENA] ¡û
>C171050561 CP016757 Synergistota Cloacibacillus porcorum CL-84 [CP016757] 1929215 1929140 - Glu CTC - ¡û
>WENV181312095 OFJB01041416 [OFJB] sludge metagenome; sludge 547 472 - Glu CTC [ENA] ¢þ
>WENV181915137 OGYF01003271 [OGYF] human gut metagenome; faeces 6368 6293 - Glu CTC [ENA] ¢þ
>WENV182031352 OHCS01011600 [OHCS] human gut metagenome; feces 1221 1296 + Glu CTC [ENA] ¢þ
>WENV182180558 OHNO01002586 [OHNO] human gut metagenome; feces 3300 3375 + Glu CTC [ENA] ¢þ
>WENV182212716 OHQG01004770 [OHQG] human gut metagenome; feces 695 770 + Glu CTC [ENA] ¢þ
>WENV182215863 OHQM01004924 [OHQM] human gut metagenome; feces 1983 2058 + Glu CTC [ENA] ¢þ
>WENV170656811 JTFO01046510 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 410 485 + Glu CTC [ENA] ¢þ
>WENV170687613 LFRM01201398 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 15431 15506 + Glu CTC [ENA] ¢þ
>WENV170688542 LFRM01250154 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 9013 8938 - Glu CTC [ENA] ¢þ
>WENV170689759 LFRM01310002 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 4636 4561 - Glu CTC [ENA] ¢þ
>WENV170976667 MTKZ01010523 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 1651 1576 - Glu CTC [ENA] ¢þ
>W1610948736 LVBQ01000027 Synergistota Synergistales bacterium Syner_03 [LVBQ] 13950 13875 - Glu CTC [ENA] ¡û
Identical group No.486061 (3 seq.)
>WENV170008089 AMZC01001421 [AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor 889 964 + Glu CTC [ENA] ¢þ
>C121008087 CP003198 Synergistota Acetomicrobium mobile DSM 13181 [CP003198] 529191 529116 - Glu CTC [Ensembl] ¡û
>W1710594061 FSQZ01000001 Synergistota Acetomicrobium flavidum [FSQZ] 543340 543415 + Glu CTC [ENA] ¡û
Identical group No.487997 (2 seq.)
>W1712039361 NFJQ01000002 Synergistota Cloacibacillus sp. An23 [NFJQ] 297056 297131 + Glu CTC [ENA] ¡û
>WENV181865434 OGWU01025995 [OGWU] human gut metagenome; faeces 128 203 + Glu CTC [ENA] ¢þ
Identical group No.490529 (4 seq.)
>W1711629566 MPPC01000017 Synergistota Aminobacterium sp. EBM-42 [MPPC] 84523 84448 - Glu CTC [ENA] ¡û
>WENV170688481 LFRM01247800 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 384 309 - Glu CTC [ENA] ¢þ
>WENV170716682 LSQX01007843 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 64989 65064 + Glu CTC [ENA] ¢þ
>C10100337 CP001997 Synergistota Aminobacterium colombiense DSM 12261 [CP001997] 596391 596316 - Glu CTC [Ensembl] ¡û
Identical group No.491402 (6 seq.)
>W141701212 JMKI01000037 Synergistota Synergistes jonesii [JMKI] 128369 128294 - Glu CTC [ENA] ¡û
>W1710629254 JPZQ01000048 Synergistota Synergistes jonesii [JPZQ] 29138 29063 - Glu CTC [ENA] ¡û
>W1710629298 JPZR01000038 Synergistota Synergistes jonesii [JPZR] 29146 29071 - Glu CTC [ENA] ¡û
>W1710629340 JPZS01000041 Synergistota Synergistes jonesii [JPZS] 29149 29074 - Glu CTC [ENA] ¡û
>W1710631859 JQEK01000051 Synergistota Synergistes jonesii [JQEK] 263 188 - Glu CTC [ENA] ¡û
>W1710631888 JQEL01000043 Synergistota Synergistes jonesii [JQEL] 29143 29068 - Glu CTC [ENA] ¡û
Identical group No.500111 (4 seq.)
>WENV183513705 OMKS01007300 [OMKS] sediment metagenome; hot spring sediment 1364 1289 - Glu CTC [ENA] ¢þ
>WENV170677181 LDZT01003503 [LDZT] terrestrial metagenome; oil reservoir sample SB1 1042 1117 + Glu CTC [ENA] ¢þ
>W1610613642 LGGB01000255 Synergistota Synergistales bacterium 53_16 [LGGB] 1042 1117 + Glu CTC [ENA] ¡û
>W1710734814 LGGB01000255 Synergistota Synergistales bacterium 53_16 [LGGB] 1042 1117 + Glu CTC [ENA] ¡û
Identical group No.500368 (3 seq.)
>WENV183514977 OMKS01040611 [OMKS] sediment metagenome; hot spring sediment 629 554 - Glu CTC [ENA] ¢þ
>WENV170657420 JTFO01148144 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 515 590 + Glu CTC [ENA] ¢þ
>W09108905 ABTR01000002 Synergistota Dethiosulfovibrio peptidovorans DSM 11002 [ABTR] 116756 116831 + Glu CTC [ENA] ¡û
Identical group No.503255 (2 seq.)
>WENV170564040 CZCB01044315 [CZCB] anaerobic digester metagenome; anaerobic digester 306 381 + Glu CTC [ENA] ¢þ
>W09126619 ACJX01000164 Synergistota Acetomicrobium hydrogeniformans ATCC BAA-1850 [ACJX] 18403 18478 + Glu CTC [ENA] ¡û
Identical group No.504040 (3 seq.)
>WENV170676937 LDZS01003275 [LDZS] terrestrial metagenome; oil reservoir sample K3 1940 2015 + Glu CTC [ENA] ¢þ
>W1610613305 LGFQ01000095 Synergistota Synergistales bacterium 54_24 [LGFQ] 1940 2015 + Glu CTC [ENA] ¡û
>W1710734512 LGFQ01000095 Synergistota Synergistales bacterium 54_24 [LGFQ] 1940 2015 + Glu CTC [ENA] ¡û
Identical group No.504140 (6 seq.)
>WENV170677173 LDZT01003320 [LDZT] terrestrial metagenome; oil reservoir sample SB1 1169 1094 - Glu CTC [ENA] ¢þ
>WENV170679043 LDZU01006788 [LDZU] terrestrial metagenome; oil reservoir sample SB2 4194 4119 - Glu CTC [ENA] ¢þ
>W1610613634 LGGB01000072 Synergistota Synergistales bacterium 53_16 [LGGB] 1169 1094 - Glu CTC [ENA] ¡û
>W1610614490 LGHG01000039 Synergistota Synergistales bacterium 54_9 [LGHG] 4194 4119 - Glu CTC [ENA] ¡û
>W1710734806 LGGB01000072 Synergistota Synergistales bacterium 53_16 [LGGB] 1169 1094 - Glu CTC [ENA] ¡û
>W1710735471 LGHG01000039 Synergistota Synergistales bacterium 54_9 [LGHG] 4194 4119 - Glu CTC [ENA] ¡û
Identical group No.517584 (7 seq.)
>WENV181908460 OGYB01000037 [OGYB] human gut metagenome; faeces 78167 78092 - Glu CTC [ENA] ¢þ
>WENV182143783 OHKV01024712 [OHKV] human gut metagenome; feces 373 298 - Glu CTC [ENA] ¢þ
>WENV182274936 OHUK01030899 [OHUK] human gut metagenome; feces 879 804 - Glu CTC [ENA] ¢þ
>WENV182538108 OIXH01039903 [OIXH] human gut metagenome; faeces 429 504 + Glu CTC [ENA] ¢þ
>WENV183038940 OLGB01002048 [OLGB] human gut metagenome; faeces 22468 22393 - Glu CTC [ENA] ¢þ
>W141452042 JFBR01000002 Synergistota Cloacibacillus evryensis DSM 19522 [JFBR] 555531 555456 - Glu CTC [ENA] ¡û
>W121000498 ACUH01000051 Synergistota Synergistes sp. 3_1_syn1 [ACUH] 124882 124807 - Glu CTC [ENA] ¡û
Identical group No.538076 (3 seq.)
>WENV180789043 ODIS01210891 [ODIS] human metagenome; G_DNA_Supragingival plaque 143 218 + Glu CTC [ENA] ¢þ
>WENV180809654 ODJK01033063 [ODJK] human metagenome; G_DNA_Subgingival plaque 678 603 - Glu CTC [ENA] ¢þ
>C161104038 FP929056 Synergistota Fretibacterium fastidiosum SGP1 [FP929056] 1274965 1274890 - Glu CTC - ¡û
Identical group No.541211 (6 seq.)
>W1711744505 MUHX01000024 Synergistota Pyramidobacter sp. C12-8 [MUHX] 561 636 + Glu CTC [ENA] ¡û
>WENV181973520 OHAA01073314 [OHAA] human gut metagenome; faeces 456 528 + Glu CTC [ENA] ¢þ
>WENV181989569 OHAO01016880 [OHAO] human gut metagenome; faeces 163 88 - Glu CTC [ENA] ¢þ
>WENV183763987 PPYE01311476 [PPYE] human gut metagenome; stool from patient with ulcerative colitis 21213 21288 + Glu CTC [ENA] ¢þ
>W10113047 ADFP01000123 Synergistota Pyramidobacter piscolens W5455 [ADFP] 26876 26801 - Glu CTC [ENA] ¡û
>W11116274 ADFP01000123 Synergistota Pyramidobacter piscolens W5455 [ADFP] 26876 26801 - Glu CTC [ENA] ¡û
Identical group No.541392 (1 seq.)
>W11138604 AEIV01000001 Synergistota Aminomonas paucivorans DSM 12260 [AEIV] 896198 896123 - Glu CTC [ENA] ¡û
Identical group No.551483 (6 seq.)
>W1711137559 LVBO01000142 Synergistota Synergistales bacterium Syner_01 [LVBO] 20023 19948 - Glu CTC [ENA] ¡û
>WENV181311983 OFJB01029260 [OFJB] sludge metagenome; sludge 690 615 - Glu CTC [ENA] ¢þ
>WENV170668842 LAHQ01063819 [LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over 271 345 + Glu CTC [ENA] ¢þ
>WENV170686737 LFRM01161217 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 683 608 - Glu CTC [ENA] ¢þ
>WENV170716648 LSQX01006550 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 930 1005 + Glu CTC [ENA] ¢þ
>W1610948679 LVBO01000142 Synergistota Synergistales bacterium Syner_01 [LVBO] 20023 19948 - Glu CTC [ENA] ¡û
Identical group No.553416 (3 seq.)
>W141146846 AWWC01000012 Synergistota Jonquetella sp. BV3C21 [AWWC] 72466 72541 + Glu CTC [ENA] ¡û
>W09132944 ACOO02000001 Synergistota Jonquetella anthropi E3_33 E1 [ACOO] 94559 94634 + Glu CTC [ENA] ¡û
>W121017511 AGRU01000004 Synergistota Jonquetella anthropi DSM 22815 [AGRU] 623068 623143 + Glu CTC [ENA] ¡û
Identical group No.559309 (5 seq.)
>WENV183713687 PDWI01149231 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 1362 1287 - Glu CTC [ENA] ¢þ
>WENV183716723 PDWJ01000152 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 11023 10948 - Glu CTC [ENA] ¢þ
>WENV183716975 PDWJ01000323 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 51896 51971 + Glu CTC [ENA] ¢þ
>W1710608688 FXBB01000007 Synergistota Dethiosulfovibrio salsuginis [FXBB] 742 817 + Glu CTC [ENA] ¡û
>W1710608690 FXBB01000010 Synergistota Dethiosulfovibrio salsuginis [FXBB] 61731 61806 + Glu CTC [ENA] ¡û
Identical group No.565069 (1 seq.)
>W131157327 AQRZ01000041 Synergistota Synergistetes bacterium JGI 0000079-D21 [AQRZ] 5950 5875 - Glu CTC [ENA] ¡û
Identical group No.574433 (1 seq.)
>W1710530818 FNPD01000001 Synergistota Acetomicrobium thermoterrenum DSM 13490 [FNPD] 126048 125973 - Glu CTC [ENA] ¡û
Identical group No.614285 (7 seq.)
>WENV181409287 OGCI01000066 [OGCI] hot springs metagenome; Hot spring water 120444 120519 + Glu CTC [ENA] ¢þ
>WENV181409751 OGCI01000560 [OGCI] hot springs metagenome; Hot spring water 1 76 + Glu CTC [ENA] ¢þ
>W09110126 ABUW01000002 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [ABUW] 144328 144253 - Glu CTC [ENA] ¡û
>W09110127 ABUW01000002 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [ABUW] 142775 142700 - Glu CTC [ENA] ¡û
>C10112991 CP001818 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [CP001818] 1439724 1439799 + Glu CTC [Ensembl] ¡û
>C10112992 CP001818 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [CP001818] 1441277 1441352 + Glu CTC [Ensembl] ¡û
>W121031653 AHGV01000001 Synergistota Thermanaerovibrio velox DSM 12556 [AHGV] 413479 413404 - Glu CTC [ENA] ¡û
Identical group No.629965 (1 seq.)
>W141278951 JAFY01000007 Synergistota Aminiphilus circumscriptus DSM 16581 [JAFY] 43549 43624 + Glu CTC [ENA] ¡û
Identical group No.641277 (1 seq.)
>C121005693 CP003096 Synergistota Thermovirga lienii DSM 17291 [CP003096] 1455757 1455832 + Glu CTC [Ensembl] ¡û
Identical group No.642160 (1 seq.)
>W141279015 JAFZ01000002 Synergistota Aminobacterium mobile DSM 12262 [JAFZ] 237697 237772 + Glu CTC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK