tRNA genes clustered and arranged according to each identical group

Synergistota

Anticodon = GAC

HIT: 17 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.658521 (21 seq.)
>W131157320 AQRZ01000032 Synergistota Synergistetes bacterium JGI 0000079-D21 [AQRZ] 11301 11375 + Val GAC [ENA] ¡û
>WENV181230568 OFEK01001604 [OFEK] activated sludge metagenome; Anaerobic digester 2842 2768 - Val GAC [ENA] ¢þ
>WENV170676985 LDZS01003909 [LDZS] terrestrial metagenome; oil reservoir sample K3 2036 1962 - Val GAC [ENA] ¢þ
>WENV170677146 LDZT01003249 [LDZT] terrestrial metagenome; oil reservoir sample SB1 11459 11385 - Val GAC [ENA] ¢þ
>WENV170678356 LDZT01014035 [LDZT] terrestrial metagenome; oil reservoir sample SB1 20157 20083 - Val GAC [ENA] ¢þ
>WENV170678618 LDZU01003377 [LDZU] terrestrial metagenome; oil reservoir sample SB2 17459 17385 - Val GAC [ENA] ¢þ
>WENV170679037 LDZU01006758 [LDZU] terrestrial metagenome; oil reservoir sample SB2 11459 11385 - Val GAC [ENA] ¢þ
>WENV170967233 MTKW01000525 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 238575 238501 - Val GAC [ENA] ¢þ
>WENV170971384 MTKX01004560 [MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 89157 89083 - Val GAC [ENA] ¢þ
>WENV170976203 MTKZ01005715 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 11938 12012 + Val GAC [ENA] ¢þ
>C121005688 CP003096 Synergistota Thermovirga lienii DSM 17291 [CP003096] 1005882 1005956 + Val GAC [Ensembl] ¡û
>W1610613347 LGFS01000071 Synergistota Thermovirga lienii [LGFS] 2036 1962 - Val GAC [ENA] ¡û
>W1610613607 LGGB01000001 Synergistota Synergistales bacterium 53_16 [LGGB] 11459 11385 - Val GAC [ENA] ¡û
>W1610613708 LGGE01000028 Synergistota Synergistales bacterium 57_84 [LGGE] 20157 20083 - Val GAC [ENA] ¡û
>W1610614156 LGGV01000002 Synergistota Synergistales bacterium 58_81 [LGGV] 17459 17385 - Val GAC [ENA] ¡û
>W1610614484 LGHG01000009 Synergistota Synergistales bacterium 54_9 [LGHG] 11459 11385 - Val GAC [ENA] ¡û
>W1710734554 LGFS01000071 Synergistota Thermovirga lienii [LGFS] 2036 1962 - Val GAC [ENA] ¡û
>W1710734779 LGGB01000001 Synergistota Synergistales bacterium 53_16 [LGGB] 11459 11385 - Val GAC [ENA] ¡û
>W1710734861 LGGE01000028 Synergistota Synergistales bacterium 57_84 [LGGE] 20157 20083 - Val GAC [ENA] ¡û
>W1710735239 LGGV01000002 Synergistota Synergistales bacterium 58_81 [LGGV] 17459 17385 - Val GAC [ENA] ¡û
>W1710735465 LGHG01000009 Synergistota Synergistales bacterium 54_9 [LGHG] 11459 11385 - Val GAC [ENA] ¡û
Identical group No.658577 (8 seq.)
>WENV170562538 CZCB01003423 [CZCB] anaerobic digester metagenome; anaerobic digester 3154 3228 + Val GAC [ENA] ¢þ
>WENV170684832 LFRM01060381 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 861 787 - Val GAC [ENA] ¢þ
>WENV170725691 LSQX01352479 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 5761 5687 - Val GAC [ENA] ¢þ
>W09126616 ACJX01000146 Synergistota Acetomicrobium hydrogeniformans ATCC BAA-1850 [ACJX] 359 285 - Val GAC [ENA] ¡û
>WENV170967714 MTKW01002970 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 2989 3063 + Val GAC [ENA] ¢þ
>C121008058 CP003198 Synergistota Acetomicrobium mobile DSM 13181 [CP003198] 687056 687130 + Val GAC [Ensembl] ¡û
>W1710530812 FNPD01000001 Synergistota Acetomicrobium thermoterrenum DSM 13490 [FNPD] 287855 287929 + Val GAC [ENA] ¡û
>W1710594087 FSQZ01000001 Synergistota Acetomicrobium flavidum [FSQZ] 385195 385121 - Val GAC [ENA] ¡û
Identical group No.674600 (11 seq.)
>W1711137619 LVBQ01000036 Synergistota Synergistales bacterium Syner_03 [LVBQ] 65373 65447 + Val GAC [ENA] ¡û
>W1712039349 NFJQ01000001 Synergistota Cloacibacillus sp. An23 [NFJQ] 214936 214862 - Val GAC [ENA] ¡û
>WENV180224795 OBBK01038446 [OBBK] human gut metagenome; human gut 143 217 + Val GAC [ENA] ¢þ
>WENV181865515 OGWU01035404 [OGWU] human gut metagenome; faeces 590 516 - Val GAC [ENA] ¢þ
>W141701187 JMKI01000002 Synergistota Synergistes jonesii [JMKI] 21799 21873 + Val GAC [ENA] ¡û
>W1610948739 LVBQ01000036 Synergistota Synergistales bacterium Syner_03 [LVBQ] 65373 65447 + Val GAC [ENA] ¡û
>W1710629230 JPZQ01000001 Synergistota Synergistes jonesii [JPZQ] 19756 19830 + Val GAC [ENA] ¡û
>W1710629273 JPZR01000002 Synergistota Synergistes jonesii [JPZR] 4315 4389 + Val GAC [ENA] ¡û
>W1710629316 JPZS01000001 Synergistota Synergistes jonesii [JPZS] 19756 19830 + Val GAC [ENA] ¡û
>W1710631856 JQEK01000047 Synergistota Synergistes jonesii [JQEK] 165069 164995 - Val GAC [ENA] ¡û
>W1710631864 JQEL01000001 Synergistota Synergistes jonesii [JQEL] 19756 19830 + Val GAC [ENA] ¡û
Identical group No.676117 (3 seq.)
>W1711629545 MPPC01000006 Synergistota Aminobacterium sp. EBM-42 [MPPC] 20352 20426 + Val GAC [ENA] ¡û
>WENV170725599 LSQX01348891 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 20278 20352 + Val GAC [ENA] ¢þ
>C10100313 CP001997 Synergistota Aminobacterium colombiense DSM 12261 [CP001997] 820203 820277 + Val GAC [Ensembl] ¡û
Identical group No.681012 (7 seq.)
>C171050562 CP016757 Synergistota Cloacibacillus porcorum CL-84 [CP016757] 1884678 1884604 - Val GAC - ¡û
>WENV181915614 OGYF01011263 [OGYF] human gut metagenome; faeces 130 204 + Val GAC [ENA] ¢þ
>WENV182143797 OHKV01026302 [OHKV] human gut metagenome; feces 769 695 - Val GAC [ENA] ¢þ
>WENV182221120 OHQS01054092 [OHQS] human gut metagenome; feces 324 398 + Val GAC [ENA] ¢þ
>WENV182274843 OHUK01016053 [OHUK] human gut metagenome; feces 441 515 + Val GAC [ENA] ¢þ
>WENV182398826 OIEN01011265 [OIEN] human gut metagenome; human gut 309 235 - Val GAC [ENA] ¢þ
>WENV182537535 OIXH01009719 [OIXH] human gut metagenome; faeces 736 662 - Val GAC [ENA] ¢þ
Identical group No.692196 (8 seq.)
>WENV181311848 OFJB01016045 [OFJB] sludge metagenome; sludge 866 792 - Val GAC [ENA] ¢þ
>WENV181908454 OGYB01000037 [OGYB] human gut metagenome; faeces 44552 44626 + Val GAC [ENA] ¢þ
>WENV183039997 OLGB01030862 [OLGB] human gut metagenome; faeces 116 190 + Val GAC [ENA] ¢þ
>WENV170657277 JTFO01116416 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 181 255 + Val GAC [ENA] ¢þ
>WENV170685221 LFRM01079115 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 2606 2532 - Val GAC [ENA] ¢þ
>WENV170719801 LSQX01129291 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 2620 2546 - Val GAC [ENA] ¢þ
>WENV170720752 LSQX01164775 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 12406 12332 - Val GAC [ENA] ¢þ
>W121000489 ACUH01000051 Synergistota Synergistes sp. 3_1_syn1 [ACUH] 91167 91241 + Val GAC [ENA] ¡û
Identical group No.698457 (3 seq.)
>WENV180096747 MTBK01144849 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 212328 212254 - Val GAC [ENA] ¢þ
>W141278963 JAFY01000007 Synergistota Aminiphilus circumscriptus DSM 16581 [JAFY] 448787 448861 + Val GAC [ENA] ¡û
>WENV170972845 MTKY01003004 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 329 403 + Val GAC [ENA] ¢þ
Identical group No.702180 (8 seq.)
>W1711744485 MUHX01000002 Synergistota Pyramidobacter sp. C12-8 [MUHX] 24785 24711 - Val GAC [ENA] ¡û
>WENV181989504 OHAO01013038 [OHAO] human gut metagenome; faeces 1296 1222 - Val GAC [ENA] ¢þ
>WENV183419703 OMAZ01021612 [OMAZ] human gut metagenome; feces 888 962 + Val GAC [ENA] ¢þ
>WENV183763978 PPYE01311400 [PPYE] human gut metagenome; stool from patient with ulcerative colitis 156 230 + Val GAC [ENA] ¢þ
>W10113048 ADFP01000135 Synergistota Pyramidobacter piscolens W5455 [ADFP] 3028 3102 + Val GAC [ENA] ¡û
>W10113049 ADFP01000135 Synergistota Pyramidobacter piscolens W5455 [ADFP] 3129 3203 + Val GAC [ENA] ¡û
>W11116275 ADFP01000135 Synergistota Pyramidobacter piscolens W5455 [ADFP] 3028 3102 + Val GAC [ENA] ¡û
>W11116276 ADFP01000135 Synergistota Pyramidobacter piscolens W5455 [ADFP] 3129 3203 + Val GAC [ENA] ¡û
Identical group No.704963 (1 seq.)
>C161104025 FP929056 Synergistota Fretibacterium fastidiosum SGP1 [FP929056] 899792 899866 + Val GAC - ¡û
Identical group No.706864 (1 seq.)
>W11138615 AEIV01000002 Synergistota Aminomonas paucivorans DSM 12260 [AEIV] 96106 96180 + Val GAC [ENA] ¡û
Identical group No.713155 (2 seq.)
>W1711137555 LVBO01000042 Synergistota Synergistales bacterium Syner_01 [LVBO] 3731 3805 + Val GAC [ENA] ¡û
>W1610948675 LVBO01000042 Synergistota Synergistales bacterium Syner_01 [LVBO] 3731 3805 + Val GAC [ENA] ¡û
Identical group No.714274 (3 seq.)
>W141146875 AWWC01000028 Synergistota Jonquetella sp. BV3C21 [AWWC] 31009 30935 - Val GAC [ENA] ¡û
>W09132963 ACOO02000018 Synergistota Jonquetella anthropi E3_33 E1 [ACOO] 88098 88172 + Val GAC [ENA] ¡û
>W121017487 AGRU01000003 Synergistota Jonquetella anthropi DSM 22815 [AGRU] 207394 207468 + Val GAC [ENA] ¡û
Identical group No.744218 (5 seq.)
>WENV170656746 JTFO01039771 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 939 865 - Val GAC [ENA] ¢þ
>WENV170656747 JTFO01039771 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 816 742 - Val GAC [ENA] ¢þ
>WENV170657451 JTFO01155405 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 691 765 + Val GAC [ENA] ¢þ
>W1710608674 FXBB01000001 Synergistota Dethiosulfovibrio salsuginis [FXBB] 183642 183568 - Val GAC [ENA] ¡û
>W1710608675 FXBB01000001 Synergistota Dethiosulfovibrio salsuginis [FXBB] 183531 183457 - Val GAC [ENA] ¡û
Identical group No.752748 (4 seq.)
>WENV181409422 OGCI01000163 [OGCI] hot springs metagenome; Hot spring water 82550 82476 - Val GAC [ENA] ¢þ
>W09110146 ABUW01000004 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [ABUW] 197310 197236 - Val GAC [ENA] ¡û
>C10113016 CP001818 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [CP001818] 1000934 1000860 - Val GAC [Ensembl] ¡û
>W121031651 AHGV01000001 Synergistota Thermanaerovibrio velox DSM 12556 [AHGV] 990243 990169 - Val GAC [ENA] ¡û
Identical group No.757415 (2 seq.)
>W09108922 ABTR01000003 Synergistota Dethiosulfovibrio peptidovorans DSM 11002 [ABTR] 222005 221931 - Val GAC [ENA] ¡û
>W09108923 ABTR01000003 Synergistota Dethiosulfovibrio peptidovorans DSM 11002 [ABTR] 221897 221823 - Val GAC [ENA] ¡û
Identical group No.772430 (1 seq.)
>W141279009 JAFZ01000001 Synergistota Aminobacterium mobile DSM 12262 [JAFZ] 1354681 1354607 - Val GAC [ENA] ¡û
Identical group No.772433 (1 seq.)
>W141452043 JFBR01000002 Synergistota Cloacibacillus evryensis DSM 19522 [JFBR] 519741 519667 - Val GAC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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