tRNA genes clustered and arranged according to each identical group

Synergistota

Anticodon = GGC

HIT: 17 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.488000 (1 seq.)
>W1712039370 NFJQ01000006 Synergistota Cloacibacillus sp. An23 [NFJQ] 138475 138400 - Ala GGC [ENA] ¡û
Identical group No.490521 (2 seq.)
>W1711629563 MPPC01000017 Synergistota Aminobacterium sp. EBM-42 [MPPC] 83711 83786 + Ala GGC [ENA] ¡û
>C10100304 CP001997 Synergistota Aminobacterium colombiense DSM 12261 [CP001997] 595579 595654 + Ala GGC [Ensembl] ¡û
Identical group No.491406 (1 seq.)
>W141701226 JMKI01000052 Synergistota Synergistes jonesii [JMKI] 194 269 + Ala GGC [ENA] ¡û
Identical group No.491408 (8 seq.)
>WENV180001153 FLNX01000073 [FLNX] bioreactor metagenome; Moose rumen 31155 31080 - Ala GGC [ENA] ¢þ
>C191012319 CP016379 Bacillota Anoxybacter fermentans DY22613 [CP016379] 3354255 3354330 + Ala GGC - ¡û
>W141701228 JMKI01000054 Synergistota Synergistes jonesii [JMKI] 1200 1125 - Ala GGC [ENA] ¡û
>W1710629268 JPZQ01000062 Synergistota Synergistes jonesii [JPZQ] 334 259 - Ala GGC [ENA] ¡û
>W1710629279 JPZR01000007 Synergistota Synergistes jonesii [JPZR] 187351 187276 - Ala GGC [ENA] ¡û
>W1710629354 JPZS01000054 Synergistota Synergistes jonesii [JPZS] 333 258 - Ala GGC [ENA] ¡û
>W1710631820 JQEK01000010 Synergistota Synergistes jonesii [JQEK] 110951 111026 + Ala GGC [ENA] ¡û
>W1710631902 JQEL01000054 Synergistota Synergistes jonesii [JQEL] 334 259 - Ala GGC [ENA] ¡û
Identical group No.495402 (18 seq.)
>W1710926242 LOED01000005 Bacillota Fervidicola ferrireducens [LOED] 382 457 + Ala GGC [ENA] ¡û
>W1711137560 LVBO01000177 Synergistota Synergistales bacterium Syner_01 [LVBO] 3553 3478 - Ala GGC [ENA] ¡û
>C024550 AP006840 Bacillota Symbiobacterium thermophilum IAM 14863 IAM14863 [AP006840] 293649 293724 + Ala GGC [Ensembl] ¡û
>C024624 AP006840 Bacillota Symbiobacterium thermophilum IAM 14863 IAM14863 [AP006840] 2130348 2130273 - Ala GGC [Ensembl] ¡û
>WENV180735402 ODGZ01211387 [ODGZ] human metagenome; G_DNA_Supragingival plaque 5 80 + Ala GGC [ENA] ¢þ
>WENV180943776 ODUC01002437 [ODUC] human metagenome; G_DNA_Supragingival plaque 127 52 - Ala GGC [ENA] ¢þ
>WENV180981904 ODVE01084892 [ODVE] human metagenome; G_DNA_Supragingival plaque 270 195 - Ala GGC [ENA] ¢þ
>WENV181050218 ODYD01009118 [ODYD] human metagenome; G_DNA_Supragingival plaque 2787 2712 - Ala GGC [ENA] ¢þ
>WENV181077294 OEAP01039628 [OEAP] human metagenome; G_DNA_Supragingival plaque 144 69 - Ala GGC [ENA] ¢þ
>WENV181081748 OEAS01359395 [OEAS] human metagenome; G_DNA_Supragingival plaque 193 118 - Ala GGC [ENA] ¢þ
>WENV181180256 OEJT01164252 [OEJT] human metagenome; G_DNA_Supragingival plaque 100 175 + Ala GGC [ENA] ¢þ
>WENV181182540 OEJV01015968 [OEJV] human metagenome; G_DNA_Supragingival plaque 274 349 + Ala GGC [ENA] ¢þ
>WENV183718554 PDWJ01004843 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 2184 2259 + Ala GGC [ENA] ¢þ
>W09108908 ABTR01000002 Synergistota Dethiosulfovibrio peptidovorans DSM 11002 [ABTR] 127190 127115 - Ala GGC [ENA] ¡û
>C10113549 CP002131 Bacillota Thermosediminibacter oceani DSM 16646 [CP002131] 1794463 1794388 - Ala GGC [Ensembl] ¡û
>W1610783735 LOED01000005 Bacillota Fervidicola ferrireducens [LOED] 382 457 + Ala GGC [ENA] ¡û
>W1610948680 LVBO01000177 Synergistota Synergistales bacterium Syner_01 [LVBO] 3553 3478 - Ala GGC [ENA] ¡û
>W1710081781 BDGJ01000082 Bacillota Calderihabitans maritimus [BDGJ] 6269 6194 - Ala GGC [ENA] ¡û
Identical group No.503019 (12 seq.)
>C171050571 CP016757 Synergistota Cloacibacillus porcorum CL-84 [CP016757] 496662 496587 - Ala GGC - ¡û
>WENV180677627 OCVV011746499 [OCVV] gut metagenome; gut 208 133 - Ala GGC [ENA] ¢þ
>WENV180677628 OCVV011746499 [OCVV] gut metagenome; gut 208 133 - Ala GGC [ENA] ¢þ
>WENV181908708 OGYB01000356 [OGYB] human gut metagenome; faeces 8252 8177 - Ala GGC [ENA] ¢þ
>WENV182212613 OHQG01002252 [OHQG] human gut metagenome; feces 4152 4227 + Ala GGC [ENA] ¢þ
>WENV182216155 OHQM01024593 [OHQM] human gut metagenome; feces 713 638 - Ala GGC [ENA] ¢þ
>WENV182537966 OIXH01026905 [OIXH] human gut metagenome; faeces 85 10 - Ala GGC [ENA] ¢þ
>WENV183038644 OLGB01000936 [OLGB] human gut metagenome; faeces 115 190 + Ala GGC [ENA] ¢þ
>WENV183419565 OMAZ01007446 [OMAZ] human gut metagenome; feces 91 16 - Ala GGC [ENA] ¢þ
>WENV170562623 CZCB01003925 [CZCB] anaerobic digester metagenome; anaerobic digester 2596 2671 + Ala GGC [ENA] ¢þ
>W141452034 JFBR01000002 Synergistota Cloacibacillus evryensis DSM 19522 [JFBR] 1657341 1657416 + Ala GGC [ENA] ¡û
>W121000465 ACUH01000028 Synergistota Synergistes sp. 3_1_syn1 [ACUH] 1590 1515 - Ala GGC [ENA] ¡û
Identical group No.516282 (9 seq.)
>W1711137599 LVBP01000279 Synergistota Synergistales bacterium Syner_02 [LVBP] 1870 1795 - Ala GGC [ENA] ¡û
>WENV180810218 ODJK01158500 [ODJK] human metagenome; G_DNA_Subgingival plaque 230 155 - Ala GGC [ENA] ¢þ
>WENV181091618 OEBC01059604 [OEBC] human metagenome; G_DNA_Supragingival plaque 633 558 - Ala GGC [ENA] ¢þ
>W141279018 JAFZ01000002 Synergistota Aminobacterium mobile DSM 12262 [JAFZ] 238551 238476 - Ala GGC [ENA] ¡û
>WENV183508030 OMHA01002352 [OMHA] human oral metagenome; human oral 321 246 - Ala GGC [ENA] ¢þ
>WENV170656666 JTFO01031809 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 228 153 - Ala GGC [ENA] ¢þ
>WENV170656713 JTFO01037256 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 183 108 - Ala GGC [ENA] ¢þ
>W1610948719 LVBP01000279 Synergistota Synergistales bacterium Syner_02 [LVBP] 1870 1795 - Ala GGC [ENA] ¡û
>W1710608714 FXBB01000031 Synergistota Dethiosulfovibrio salsuginis [FXBB] 2079 2004 - Ala GGC [ENA] ¡û
Identical group No.530895 (4 seq.)
>WENV180789191 ODIS01312311 [ODIS] human metagenome; G_DNA_Supragingival plaque 256 181 - Ala GGC [ENA] ¢þ
>WENV180809519 ODJK01022513 [ODJK] human metagenome; G_DNA_Subgingival plaque 578 653 + Ala GGC [ENA] ¢þ
>WENV180952272 ODUH01200729 [ODUH] human metagenome; G_DNA_Subgingival plaque 159 84 - Ala GGC [ENA] ¢þ
>C161104035 FP929056 Synergistota Fretibacterium fastidiosum SGP1 [FP929056] 1878531 1878456 - Ala GGC - ¡û
Identical group No.541205 (8 seq.)
>W1711744479 MUHX01000001 Synergistota Pyramidobacter sp. C12-8 [MUHX] 4298 4373 + Ala GGC [ENA] ¡û
>WENV181438151 OGDH01011816 [OGDH] metagenome; Human gut stool 789 864 + Ala GGC [ENA] ¢þ
>WENV181638992 OGNC01055656 [OGNC] metagenome; Human gut stool 579 504 - Ala GGC [ENA] ¢þ
>WENV181865634 OGWU01055400 [OGWU] human gut metagenome; faeces 658 733 + Ala GGC [ENA] ¢þ
>WENV181988920 OHAO01001360 [OHAO] human gut metagenome; faeces 613 538 - Ala GGC [ENA] ¢þ
>WENV183763915 PPYE01311215 [PPYE] human gut metagenome; stool from patient with ulcerative colitis 30203 30128 - Ala GGC [ENA] ¢þ
>W10113008 ADFP01000006 Synergistota Pyramidobacter piscolens W5455 [ADFP] 93 168 + Ala GGC [ENA] ¡û
>W11116235 ADFP01000006 Synergistota Pyramidobacter piscolens W5455 [ADFP] 93 168 + Ala GGC [ENA] ¡û
Identical group No.554144 (7 seq.)
>W141146847 AWWC01000018 Synergistota Jonquetella sp. BV3C21 [AWWC] 42922 42997 + Ala GGC [ENA] ¡û
>W141146848 AWWC01000018 Synergistota Jonquetella sp. BV3C21 [AWWC] 43030 43105 + Ala GGC [ENA] ¡û
>W09132949 ACOO02000017 Synergistota Jonquetella anthropi E3_33 E1 [ACOO] 43154 43229 + Ala GGC [ENA] ¡û
>W09132950 ACOO02000017 Synergistota Jonquetella anthropi E3_33 E1 [ACOO] 43263 43338 + Ala GGC [ENA] ¡û
>W1911726583 QSNL01000002 Bacillota Thermoanaerobacteraceae bacterium SP2 [QSNL] 125962 125887 - Ala GGC [ENA] ¡û
>W121017476 AGRU01000003 Synergistota Jonquetella anthropi DSM 22815 [AGRU] 47893 47968 + Ala GGC [ENA] ¡û
>W121017477 AGRU01000003 Synergistota Jonquetella anthropi DSM 22815 [AGRU] 48002 48077 + Ala GGC [ENA] ¡û
Identical group No.561268 (6 seq.)
>W1711137624 LVBQ01000053 Synergistota Synergistales bacterium Syner_03 [LVBQ] 6123 6198 + Ala GGC [ENA] ¡û
>WENV181311995 OFJB01030582 [OFJB] sludge metagenome; sludge 319 244 - Ala GGC [ENA] ¢þ
>WENV170657430 JTFO01149015 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 603 678 + Ala GGC [ENA] ¢þ
>WENV170688886 LFRM01266303 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 7269 7344 + Ala GGC [ENA] ¢þ
>WENV170976172 MTKZ01005412 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 3362 3437 + Ala GGC [ENA] ¢þ
>W1610948744 LVBQ01000053 Synergistota Synergistales bacterium Syner_03 [LVBQ] 6123 6198 + Ala GGC [ENA] ¡û
Identical group No.658506 (8 seq.)
>WENV170562805 CZCB01005500 [CZCB] anaerobic digester metagenome; anaerobic digester 9438 9364 - Ala GGC [ENA] ¢þ
>WENV170684156 LFRM01023697 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 4233 4307 + Ala GGC [ENA] ¢þ
>WENV170717728 LSQX01047433 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 3562 3488 - Ala GGC [ENA] ¢þ
>WENV170967103 MTKW01000251 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 3148 3222 + Ala GGC [ENA] ¢þ
>W09126620 ACJX01000165 Synergistota Acetomicrobium hydrogeniformans ATCC BAA-1850 [ACJX] 1962 1888 - Ala GGC [ENA] ¡û
>C121008056 CP003198 Synergistota Acetomicrobium mobile DSM 13181 [CP003198] 523193 523267 + Ala GGC [Ensembl] ¡û
>W1710530810 FNPD01000001 Synergistota Acetomicrobium thermoterrenum DSM 13490 [FNPD] 120577 120651 + Ala GGC [ENA] ¡û
>W1710594085 FSQZ01000001 Synergistota Acetomicrobium flavidum [FSQZ] 548734 548660 - Ala GGC [ENA] ¡û
Identical group No.684011 (8 seq.)
>WENV170676503 LDZS01000260 [LDZS] terrestrial metagenome; oil reservoir sample K3 150 224 + Ala GGC [ENA] ¢þ
>WENV170677164 LDZT01003276 [LDZT] terrestrial metagenome; oil reservoir sample SB1 6109 6035 - Ala GGC [ENA] ¢þ
>WENV170679041 LDZU01006781 [LDZU] terrestrial metagenome; oil reservoir sample SB2 7472 7546 + Ala GGC [ENA] ¢þ
>C121005696 CP003096 Synergistota Thermovirga lienii DSM 17291 [CP003096] 1457806 1457732 - Ala GGC [Ensembl] ¡û
>W1610613625 LGGB01000028 Synergistota Synergistales bacterium 53_16 [LGGB] 6109 6035 - Ala GGC [ENA] ¡û
>W1610614488 LGHG01000032 Synergistota Synergistales bacterium 54_9 [LGHG] 7472 7546 + Ala GGC [ENA] ¡û
>W1710734797 LGGB01000028 Synergistota Synergistales bacterium 53_16 [LGGB] 6109 6035 - Ala GGC [ENA] ¡û
>W1710735469 LGHG01000032 Synergistota Synergistales bacterium 54_9 [LGHG] 7472 7546 + Ala GGC [ENA] ¡û
Identical group No.684038 (3 seq.)
>WENV170676932 LDZS01003218 [LDZS] terrestrial metagenome; oil reservoir sample K3 1687 1613 - Ala GGC [ENA] ¢þ
>W1610613300 LGFQ01000038 Synergistota Synergistales bacterium 54_24 [LGFQ] 1687 1613 - Ala GGC [ENA] ¡û
>W1710734507 LGFQ01000038 Synergistota Synergistales bacterium 54_24 [LGFQ] 1687 1613 - Ala GGC [ENA] ¡û
Identical group No.706861 (5 seq.)
>WENV181409753 OGCI01000560 [OGCI] hot springs metagenome; Hot spring water 6688 6614 - Ala GGC [ENA] ¢þ
>W09110120 ABUW01000002 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [ABUW] 136088 136162 + Ala GGC [ENA] ¡û
>C10113004 CP001818 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [CP001818] 1447965 1447891 - Ala GGC [Ensembl] ¡û
>W11138590 AEIV01000001 Synergistota Aminomonas paucivorans DSM 12260 [AEIV] 890540 890614 + Ala GGC [ENA] ¡û
>W121031617 AHGV01000001 Synergistota Thermanaerovibrio velox DSM 12556 [AHGV] 406044 406118 + Ala GGC [ENA] ¡û
Identical group No.721550 (1 seq.)
>W131157324 AQRZ01000041 Synergistota Synergistetes bacterium JGI 0000079-D21 [AQRZ] 4220 4294 + Ala GGC [ENA] ¡û
Identical group No.762360 (1 seq.)
>W141278949 JAFY01000005 Synergistota Aminiphilus circumscriptus DSM 16581 [JAFY] 221555 221481 - Ala GGC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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