tRNA genes clustered and arranged according to each identical group

Synergistota

Anticodon = TAC

HIT: 15 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.658657 (11 seq.)
>WENV170008226 AMZC01005281 [AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor 1150 1224 + Val TAC [ENA] ¢þ
>WENV170561534 CZCA01012879 [CZCA] anaerobic digester metagenome; anaerobic digester 1010 1084 + Val TAC [ENA] ¢þ
>WENV170562823 CZCB01005732 [CZCB] anaerobic digester metagenome; anaerobic digester 1010 1084 + Val TAC [ENA] ¢þ
>WENV170563429 CZCB01017675 [CZCB] anaerobic digester metagenome; anaerobic digester 2373 2447 + Val TAC [ENA] ¢þ
>WENV170685652 LFRM01103005 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 888 814 - Val TAC [ENA] ¢þ
>WENV170718816 LSQX01091600 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 3533 3607 + Val TAC [ENA] ¢þ
>W09126627 ACJX01000176 Synergistota Acetomicrobium hydrogeniformans ATCC BAA-1850 [ACJX] 15213 15139 - Val TAC [ENA] ¡û
>WENV170968339 MTKW01008389 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 527 453 - Val TAC [ENA] ¢þ
>C121008046 CP003198 Synergistota Acetomicrobium mobile DSM 13181 [CP003198] 216731 216805 + Val TAC [Ensembl] ¡û
>W1710530849 FNPD01000014 Synergistota Acetomicrobium thermoterrenum DSM 13490 [FNPD] 32784 32710 - Val TAC [ENA] ¡û
>W1710594075 FSQZ01000001 Synergistota Acetomicrobium flavidum [FSQZ] 854999 854925 - Val TAC [ENA] ¡û
Identical group No.674601 (9 seq.)
>W1711137611 LVBQ01000027 Synergistota Synergistales bacterium Syner_03 [LVBQ] 30607 30681 + Val TAC [ENA] ¡û
>W1712039353 NFJQ01000002 Synergistota Cloacibacillus sp. An23 [NFJQ] 128145 128219 + Val TAC [ENA] ¡û
>WENV180096977 MTBK01159519 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 295 369 + Val TAC [ENA] ¢þ
>WENV180224018 OBBI01024341 [OBBI] human gut metagenome; human gut 20 94 + Val TAC [ENA] ¢þ
>WENV182291862 OHVZ01041008 [OHVZ] human gut metagenome; feces 262 188 - Val TAC [ENA] ¢þ
>WENV170657442 JTFO01152932 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 143 217 + Val TAC [ENA] ¢þ
>WENV170686404 LFRM01142826 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 17402 17328 - Val TAC [ENA] ¢þ
>WENV170978286 MTKZ01045906 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 236 162 - Val TAC [ENA] ¢þ
>W1610948731 LVBQ01000027 Synergistota Synergistales bacterium Syner_03 [LVBQ] 30607 30681 + Val TAC [ENA] ¡û
Identical group No.676114 (4 seq.)
>W1711629536 MPPC01000004 Synergistota Aminobacterium sp. EBM-42 [MPPC] 80879 80805 - Val TAC [ENA] ¡û
>W141279026 JAFZ01000004 Synergistota Aminobacterium mobile DSM 12262 [JAFZ] 85076 85002 - Val TAC [ENA] ¡û
>WENV170720779 LSQX01166068 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 5496 5570 + Val TAC [ENA] ¢þ
>C10100296 CP001997 Synergistota Aminobacterium colombiense DSM 12261 [CP001997] 337023 337097 + Val TAC [Ensembl] ¡û
Identical group No.676525 (17 seq.)
>C171050537 CP016757 Synergistota Cloacibacillus porcorum CL-84 [CP016757] 1584025 1584099 + Val TAC - ¡û
>WENV180274731 OBHE01025304 [OBHE] human gut metagenome; human gut 448 374 - Val TAC [ENA] ¢þ
>WENV181908444 OGYB01000027 [OGYB] human gut metagenome; faeces 136132 136058 - Val TAC [ENA] ¢þ
>WENV181915168 OGYF01003639 [OGYF] human gut metagenome; faeces 9083 9157 + Val TAC [ENA] ¢þ
>WENV182031202 OHCS01005332 [OHCS] human gut metagenome; feces 134 60 - Val TAC [ENA] ¢þ
>WENV182212722 OHQG01005066 [OHQG] human gut metagenome; feces 2957 3031 + Val TAC [ENA] ¢þ
>WENV182216032 OHQM01013743 [OHQM] human gut metagenome; feces 1436 1362 - Val TAC [ENA] ¢þ
>WENV182537976 OIXH01028019 [OIXH] human gut metagenome; faeces 1685 1759 + Val TAC [ENA] ¢þ
>WENV183039650 OLGB01011383 [OLGB] human gut metagenome; faeces 2855 2781 - Val TAC [ENA] ¢þ
>W141452026 JFBR01000002 Synergistota Cloacibacillus evryensis DSM 19522 [JFBR] 209041 209115 + Val TAC [ENA] ¡û
>W141701183 JMKI01000002 Synergistota Synergistes jonesii [JMKI] 14514 14588 + Val TAC [ENA] ¡û
>W121000482 ACUH01000050 Synergistota Synergistes sp. 3_1_syn1 [ACUH] 10113 10187 + Val TAC [ENA] ¡û
>W1710629226 JPZQ01000001 Synergistota Synergistes jonesii [JPZQ] 12471 12545 + Val TAC [ENA] ¡û
>W1710629269 JPZR01000001 Synergistota Synergistes jonesii [JPZR] 12471 12545 + Val TAC [ENA] ¡û
>W1710629312 JPZS01000001 Synergistota Synergistes jonesii [JPZS] 12471 12545 + Val TAC [ENA] ¡û
>W1710631852 JQEK01000047 Synergistota Synergistes jonesii [JQEK] 172354 172280 - Val TAC [ENA] ¡û
>W1710631860 JQEL01000001 Synergistota Synergistes jonesii [JQEL] 12471 12545 + Val TAC [ENA] ¡û
Identical group No.681962 (4 seq.)
>WENV183516307 OMKS01156339 [OMKS] sediment metagenome; hot spring sediment 117 43 - Val TAC [ENA] ¢þ
>WENV170677179 LDZT01003492 [LDZT] terrestrial metagenome; oil reservoir sample SB1 82 8 - Val TAC [ENA] ¢þ
>W1610613640 LGGB01000244 Synergistota Synergistales bacterium 53_16 [LGGB] 82 8 - Val TAC [ENA] ¡û
>W1710734812 LGGB01000244 Synergistota Synergistales bacterium 53_16 [LGGB] 82 8 - Val TAC [ENA] ¡û
Identical group No.691501 (17 seq.)
>W1711137577 LVBO01000648 Synergistota Synergistales bacterium Syner_01 [LVBO] 1407 1481 + Val TAC [ENA] ¡û
>WENV180731894 ODGW01031308 [ODGW] human metagenome; G_DNA_Supragingival plaque 341 267 - Val TAC [ENA] ¢þ
>WENV180751856 ODHS01214636 [ODHS] human metagenome; G_DNA_Supragingival plaque 125 51 - Val TAC [ENA] ¢þ
>WENV180789222 ODIS01335096 [ODIS] human metagenome; G_DNA_Supragingival plaque 94 168 + Val TAC [ENA] ¢þ
>WENV180798227 ODJB01361483 [ODJB] human metagenome; G_DNA_Supragingival plaque 67 141 + Val TAC [ENA] ¢þ
>WENV180810200 ODJK01152524 [ODJK] human metagenome; G_DNA_Subgingival plaque 226 152 - Val TAC [ENA] ¢þ
>WENV180944643 ODUC01027292 [ODUC] human metagenome; G_DNA_Supragingival plaque 125 199 + Val TAC [ENA] ¢þ
>WENV180982180 ODVE01193253 [ODVE] human metagenome; G_DNA_Supragingival plaque 124 198 + Val TAC [ENA] ¢þ
>WENV181050709 ODYD01045969 [ODYD] human metagenome; G_DNA_Supragingival plaque 143 217 + Val TAC [ENA] ¢þ
>WENV181081564 OEAS01261682 [OEAS] human metagenome; G_DNA_Supragingival plaque 131 205 + Val TAC [ENA] ¢þ
>WENV181091996 OEBC01171813 [OEBC] human metagenome; G_DNA_Supragingival plaque 125 199 + Val TAC [ENA] ¢þ
>WENV181182924 OEJV01079106 [OEJV] human metagenome; G_DNA_Supragingival plaque 140 214 + Val TAC [ENA] ¢þ
>WENV183507945 OMGZ01001316 [OMGZ] human oral metagenome; human oral 503 429 - Val TAC [ENA] ¢þ
>WENV170684590 LFRM01047651 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 3062 2988 - Val TAC [ENA] ¢þ
>WENV170717726 LSQX01047364 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 351 277 - Val TAC [ENA] ¢þ
>C161104047 FP929056 Synergistota Fretibacterium fastidiosum SGP1 [FP929056] 945512 945438 - Val TAC - ¡û
>W1610948697 LVBO01000648 Synergistota Synergistales bacterium Syner_01 [LVBO] 1407 1481 + Val TAC [ENA] ¡û
Identical group No.706764 (4 seq.)
>W1711744509 MUHX01000030 Synergistota Pyramidobacter sp. C12-8 [MUHX] 4828 4902 + Val TAC [ENA] ¡û
>WENV183764060 PPYE01312981 [PPYE] human gut metagenome; stool from patient with ulcerative colitis 5842 5916 + Val TAC [ENA] ¢þ
>W10113033 ADFP01000084 Synergistota Pyramidobacter piscolens W5455 [ADFP] 4783 4857 + Val TAC [ENA] ¡û
>W11116260 ADFP01000084 Synergistota Pyramidobacter piscolens W5455 [ADFP] 4783 4857 + Val TAC [ENA] ¡û
Identical group No.706865 (1 seq.)
>W11138617 AEIV01000002 Synergistota Aminomonas paucivorans DSM 12260 [AEIV] 707592 707518 - Val TAC [ENA] ¡û
Identical group No.714273 (3 seq.)
>W141146849 AWWC01000018 Synergistota Jonquetella sp. BV3C21 [AWWC] 46115 46189 + Val TAC [ENA] ¡û
>W09132951 ACOO02000017 Synergistota Jonquetella anthropi E3_33 E1 [ACOO] 46348 46422 + Val TAC [ENA] ¡û
>W121017478 AGRU01000003 Synergistota Jonquetella anthropi DSM 22815 [AGRU] 51087 51161 + Val TAC [ENA] ¡û
Identical group No.721549 (2 seq.)
>W131157315 AQRZ01000027 Synergistota Synergistetes bacterium JGI 0000079-D21 [AQRZ] 1328 1254 - Val TAC [ENA] ¡û
>WENV181230274 OFEK01000582 [OFEK] activated sludge metagenome; Anaerobic digester 25067 25141 + Val TAC [ENA] ¢þ
Identical group No.752746 (4 seq.)
>WENV181409527 OGCI01000259 [OGCI] hot springs metagenome; Hot spring water 57189 57115 - Val TAC [ENA] ¢þ
>W09110113 ABUW01000002 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [ABUW] 10588 10662 + Val TAC [ENA] ¡û
>C10112997 CP001818 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [CP001818] 1573447 1573373 - Val TAC [Ensembl] ¡û
>W121031610 AHGV01000001 Synergistota Thermanaerovibrio velox DSM 12556 [AHGV] 297026 297100 + Val TAC [ENA] ¡û
Identical group No.756739 (2 seq.)
>W141278941 JAFY01000005 Synergistota Aminiphilus circumscriptus DSM 16581 [JAFY] 427738 427664 - Val TAC [ENA] ¡û
>W1610945994 LUYG01000291 Euryarchaeota Methanosarcinales archaeon Methan_03 [LUYG] 1042 968 - Val TAC [ENA] ¡û
Identical group No.757414 (1 seq.)
>W09108891 ABTR01000001 Synergistota Dethiosulfovibrio peptidovorans DSM 11002 [ABTR] 417042 416968 - Val TAC [ENA] ¡û
Identical group No.761590 (1 seq.)
>W1710608702 FXBB01000019 Synergistota Dethiosulfovibrio salsuginis [FXBB] 5348 5422 + Val TAC [ENA] ¡û
Identical group No.772061 (1 seq.)
>C121005670 CP003096 Synergistota Thermovirga lienii DSM 17291 [CP003096] 484021 484095 + Val TAC [Ensembl] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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