tRNA genes clustered and arranged according to each identical group

Viridiplantae

Anticodon = TAA

HIT: 7 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.88522 (30 seq.)
>WENV180106756 OAPF01002157 [OAPF] marine metagenome; ENVO:00002010 375 461 + Leu TAA [ENA]
>WENV180110189 OAPM01001597 [OAPM] marine metagenome; ENVO.00002110 458 544 + Leu TAA [ENA]
>WENV180115474 OAPT01003361 [OAPT] marine metagenome; seawater 242 156 - Leu TAA [ENA]
>WENV180367175 OBOE01018208 [OBOE] marine metagenome; ENVO:00002010 485 571 + Leu TAA [ENA]
>WENV181092558 OEBK01007898 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 119 33 - Leu TAA [ENA]
>WENV170123780 CENO01076684 [CENO] marine metagenome genome assembly TARA_033_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1 87 + Leu TAA [ENA]
>WENV170145233 CENY01290141 [CENY] marine metagenome genome assembly TARA_032_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 781 695 - Leu TAA [ENA]
>WENV170157174 CEOJ01039729 [CEOJ] marine metagenome genome assembly TARA_034_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1521 1435 - Leu TAA [ENA]
>WENV170175518 CEOR01049824 [CEOR] marine metagenome genome assembly TARA_064_DCM_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 476 562 + Leu TAA [ENA]
>WENV170177900 CEOU01141869 [CEOU] marine metagenome genome assembly TARA_065_DCM_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 210 296 + Leu TAA [ENA]
>WENV170178637 CEOV01066631 [CEOV] marine metagenome genome assembly TARA_062_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1 87 + Leu TAA [ENA]
>WENV170189970 CEPC01049675 [CEPC] marine metagenome genome assembly TARA_064_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1 87 + Leu TAA [ENA]
>WENV170205891 CEPT01135839 [CEPT] marine metagenome genome assembly TARA_039_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1049 963 - Leu TAA [ENA]
>WENV170241909 CEQO01016732 [CEQO] marine metagenome genome assembly TARA_078_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1 87 + Leu TAA [ENA]
>WENV170375849 CETU01021268 [CETU] marine metagenome genome assembly TARA_142_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1242 1328 + Leu TAA [ENA]
>WENV170418259 CEUM01030121 [CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 7804 7890 + Leu TAA [ENA]
>WENV170439453 CEUV01033440 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6363 6277 - Leu TAA [ENA]
>WENV170486219 CEVN01159884 [CEVN] marine metagenome genome assembly TARA_142_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1062 976 - Leu TAA [ENA]
>WENV170578569 FUFK010019573 [FUFK] metagenome; unknown 1354 1440 + Leu TAA [ENA]
>WENV170580725 FUFK010050327 [FUFK] metagenome; unknown 7950 8036 + Leu TAA [ENA]
>WENV170582696 FUFK010107944 [FUFK] metagenome; unknown 1029 1115 + Leu TAA [ENA]
>WENV170586010 FUFK010352629 [FUFK] metagenome; unknown 663 749 + Leu TAA [ENA]
>WENV170590854 FUFK010741550 [FUFK] metagenome; unknown 951 865 - Leu TAA [ENA]
>WENV170592657 FUFK010815016 [FUFK] metagenome; unknown 1338 1252 - Leu TAA [ENA]
>WENV170813166 MDSW01195020 [MDSW] marine metagenome; seawater 1444 1358 - Leu TAA [ENA]
>WENV170842284 MDSZ01237350 [MDSZ] marine metagenome; seawater 3352 3266 - Leu TAA [ENA]
>WENV170845260 MDTA01020641 [MDTA] marine metagenome; seawater 400 314 - Leu TAA [ENA]
>WENV170892637 MDTD01040688 [MDTD] marine metagenome; seawater 15172 15086 - Leu TAA [ENA]
>WENV170913193 MDTE01131029 [MDTE] marine metagenome; seawater 6892 6806 - Leu TAA [ENA]
>CHL1810001901 FJ858267 Viridiplantae Micromonas commoda RCC299 (FJ858267) 27508 27422 - Leu TAA [ENA]
Identical group No.92732 (6 seq.)
>WENV170418694 CEUM01061488 [CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6286 6370 + Leu TAA [ENA]
>WENV170439868 CEUV01055528 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 38221 38305 + Leu TAA [ENA]
>WENV170468977 CEVF01074076 [CEVF] marine metagenome genome assembly TARA_124_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 416 500 + Leu TAA [ENA]
>WENV170517867 CEWE01065685 [CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 25997 25913 - Leu TAA [ENA]
>WENV170903495 MDTD01202932 [MDTD] marine metagenome; seawater 8694 8610 - Leu TAA [ENA]
>CHL1810012772 KJ746598 Viridiplantae Prasinoderma coloniale (KJ746598) 30809 30725 - Leu TAA [ENA]
Identical group No.98852 (8 seq.)
>R05900033 AP008210 Plant Oryza sativa Japonica Group 9163032 9163662 + Leu TAA [RAP-DB]
>R05900078 AP008216 Plant Oryza sativa Japonica Group 11251810 11252440 + Leu TAA [RAP-DB]
>R05900086 AP008216 Plant Oryza sativa Japonica Group 20964377 20963747 - Leu TAA [RAP-DB]
>R05900007 AP008207 Plant Oryza sativa Japonica Group 35292500 35291870 - Leu TAA [RAP-DB]
>R05900012 AP008218 Plant Oryza sativa Japonica Group 11291210 11291839 + Leu TAA [RAP-DB]
>CHL090800054 AP006728 Viridiplantae Oryza nivara 46474 47101 + Leu TAA [ENA]
>CHL090800105 AY522329 Viridiplantae Oryza sativa Indica Group 46495 47122 + Leu TAA [ENA]
>CHL090800113 AY522331 Viridiplantae Oryza sativa (japonica cultivar-group) isolate PA64S 46548 47175 + Leu TAA [ENA]
Identical group No.105904 (3 seq.)
>WENV170702755 LKMJ01004010 [LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake 5020 5106 + Leu TAA [ENA]
>WENV170703129 LKMJ01006887 [LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake 9472 9388 - Leu TAA [ENA]
>CHL1810002239 GQ250046 Viridiplantae Dunaliella salina CCAP 19/18 (GQ250046) 170472 170388 - Leu TAA [ENA]
Identical group No.154529 (35 seq.)
>W131220519 ATZM01000859 Unclassified Proteobacteria bacterium JGI 0000113-E04 [ATZM] 11998 12080 + Leu TAA [ENA]
>WENV180047648 MPLT02248196 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 526 442 - Leu TAA [ENA]
>WENV180362492 OBNX01000976 [OBNX] marine metagenome; ENVO:00002010 210 292 + Leu TAA [ENA]
>WENV180377343 OBON01012547 [OBON] marine metagenome; sea water 8 90 + Leu TAA [ENA]
>WENV180689337 OCZA010785491 [OCZA] marine metagenome; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 147 229 + Leu TAA [ENA]
>WENV181092555 OEBK01007636 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 531 613 + Leu TAA [ENA]
>WENV181325322 OFLI01041916 [OFLI] seawater metagenome; seawater 72 154 + Leu TAA [ENA]
>WENV182545638 OJBN01010619 [OJBN] seawater metagenome; Sea water 617 535 - Leu TAA [ENA]
>WENV182556705 OJDG01040251 [OJDG] seawater metagenome; Sea water 78 160 + Leu TAA [ENA]
>WENV183618772 OOFO01043296 [OOFO] marine metagenome; seawater 72 154 + Leu TAA [ENA]
>WENV183620847 OOFS01053217 [OOFS] marine metagenome; sea ice 420 502 + Leu TAA [ENA]
>WENV183621934 OOFV01000904 [OOFV] marine metagenome; seawater 1915 1999 + Leu TAA [ENA]
>WENV170137916 CENW01066832 [CENW] marine metagenome genome assembly TARA_032_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 11090 11006 - Leu TAA [ENA]
>WENV170149107 CEOC01001485 [CEOC] marine metagenome genome assembly TARA_036_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 92 176 + Leu TAA [ENA]
>WENV170178059 CEOV01006230 [CEOV] marine metagenome genome assembly TARA_062_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 97 181 + Leu TAA [ENA]
>WENV170210621 CEPW01002290 [CEPW] marine metagenome genome assembly TARA_038_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 90 174 + Leu TAA [ENA]
>WENV170238644 CEQM01205042 [CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1 85 + Leu TAA [ENA]
>WENV170247575 CEQQ01047696 [CEQQ] marine metagenome genome assembly TARA_076_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 8944 8860 - Leu TAA [ENA]
>WENV170252994 CEQU01043508 [CEQU] marine metagenome genome assembly TARA_076_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 8929 8845 - Leu TAA [ENA]
>WENV170281190 CERS01026495 [CERS] marine metagenome genome assembly TARA_068_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 93 175 + Leu TAA [ENA]
>WENV170326771 CESU01019459 [CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 93 175 + Leu TAA [ENA]
>WENV170335714 CESZ01092348 [CESZ] marine metagenome genome assembly TARA_078_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1084 1002 - Leu TAA [ENA]
>WENV170391933 CEUA01440363 [CEUA] marine metagenome genome assembly TARA_132_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 100 184 + Leu TAA [ENA]
>WENV170401843 CEUE01280626 [CEUE] marine metagenome genome assembly TARA_133_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 406 488 + Leu TAA [ENA]
>WENV170502594 CEVV01009189 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 98 180 + Leu TAA [ENA]
>WENV170506970 CEVX01007598 [CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 98 180 + Leu TAA [ENA]
>WENV170568385 FLMP01035261 [FLMP] seawater metagenome; seawater 292 374 + Leu TAA [ENA]
>WENV170599945 FUWD010099481 [FUWD] metagenome; unknown 199 283 + Leu TAA [ENA]
>WENV170821225 MDSY01018208 [MDSY] marine metagenome; seawater 2371 2453 + Leu TAA [ENA]
>WENV170830912 MDSZ01035059 [MDSZ] marine metagenome; seawater 8007 8091 + Leu TAA [ENA]
>WENV170855212 MDTA01202552 [MDTA] marine metagenome; seawater 1596 1680 + Leu TAA [ENA]
>WENV170912015 MDTE01114219 [MDTE] marine metagenome; seawater 9975 9891 - Leu TAA [ENA]
>WENV170933741 MDTG01225686 [MDTG] marine metagenome; seawater 3532 3448 - Leu TAA [ENA]
>WENV170953923 MEHZ011678572 [MEHZ] marine metagenome; marine surface water 206 288 + Leu TAA [ENA]
>CHL1810002143 FO082259 Viridiplantae Bathycoccus prasinos RCC 1105 (FO082259) 44349 44267 - Leu TAA [ENA]
Identical group No.155463 (38 seq.)
>WENV015005 AACY020419986 Marine microbial communities from Global Ocean Sampling (GOS) 4032 4119 + Leu TAA [ENA]
>WENV180045274 MOXS02098715 [MOXS] marine metagenome; 60 m water sample filtered on 0.2 um supor filter 244 328 + Leu TAA [ENA]
>WENV180046647 MPLT02119520 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 7257 7341 + Leu TAA [ENA]
>WENV180370279 OBOH01058334 [OBOH] marine metagenome; ENVO:00002010 270 186 - Leu TAA [ENA]
>WENV180375384 OBOL01006246 [OBOL] marine metagenome; Surface water 349 267 - Leu TAA [ENA]
>WENV180377381 OBON01016078 [OBON] marine metagenome; sea water 330 414 + Leu TAA [ENA]
>WENV180392669 OBPP01001966 [OBPP] marine metagenome; ENVO:00002042 126 42 - Leu TAA [ENA]
>WENV180393697 OBPR01001537 [OBPR] marine metagenome; ENVO:00002042 1333 1417 + Leu TAA [ENA]
>WENV183794788 PVBE010123453 [PVBE] marine metagenome; water 5937 5853 - Leu TAA [ENA]
>WENV170123745 CENO01073174 [CENO] marine metagenome genome assembly TARA_033_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1 85 + Leu TAA [ENA]
>WENV170149108 CEOC01001548 [CEOC] marine metagenome genome assembly TARA_036_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1 83 + Leu TAA [ENA]
>WENV170157116 CEOJ01035699 [CEOJ] marine metagenome genome assembly TARA_034_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 14367 14283 - Leu TAA [ENA]
>WENV170196136 CEPK01025747 [CEPK] marine metagenome genome assembly TARA_042_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 10637 10555 - Leu TAA [ENA]
>WENV170274805 CERM01043414 [CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6824 6906 + Leu TAA [ENA]
>WENV170285784 CERW01020627 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4769 4851 + Leu TAA [ENA]
>WENV170393112 CEUB01125538 [CEUB] marine metagenome genome assembly TARA_138_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 88 172 + Leu TAA [ENA]
>WENV170418139 CEUM01023854 [CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6626 6708 + Leu TAA [ENA]
>WENV170422109 CEUN01134002 [CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 8675 8757 + Leu TAA [ENA]
>WENV170425485 CEUP01105005 [CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5739 5657 - Leu TAA [ENA]
>WENV170427275 CEUQ01162878 [CEUQ] marine metagenome genome assembly TARA_124_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 7994 8076 + Leu TAA [ENA]
>WENV170430647 CEUR01337313 [CEUR] marine metagenome genome assembly TARA_123_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 7572 7654 + Leu TAA [ENA]
>WENV170439344 CEUV01027231 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6680 6762 + Leu TAA [ENA]
>WENV170447119 CEUY01193573 [CEUY] marine metagenome genome assembly TARA_123_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4260 4342 + Leu TAA [ENA]
>WENV170469899 CEVF01148789 [CEVF] marine metagenome genome assembly TARA_124_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 11798 11716 - Leu TAA [ENA]
>WENV170499464 CEVT01162360 [CEVT] marine metagenome genome assembly TARA_150_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1084 1000 - Leu TAA [ENA]
>WENV170505601 CEVW01079765 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 395 311 - Leu TAA [ENA]
>WENV170510474 CEVZ01003606 [CEVZ] marine metagenome genome assembly TARA_041_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2 84 + Leu TAA [ENA]
>WENV170517902 CEWE01068578 [CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 7499 7581 + Leu TAA [ENA]
>WENV170616836 FUWD012904488 [FUWD] metagenome; unknown 456 372 - Leu TAA [ENA]
>WENV170620328 FUWD013029459 [FUWD] metagenome; unknown 341 259 - Leu TAA [ENA]
>WENV170624672 FUWD013184907 [FUWD] metagenome; unknown 194 110 - Leu TAA [ENA]
>WENV170628465 FUWD013247093 [FUWD] metagenome; unknown 341 259 - Leu TAA [ENA]
>WENV170632953 FUWD013389208 [FUWD] metagenome; unknown 194 110 - Leu TAA [ENA]
>WENV170816101 MDSX01023708 [MDSX] marine metagenome; seawater 1604 1686 + Leu TAA [ENA]
>WENV170891635 MDTD01026930 [MDTD] marine metagenome; seawater 7538 7620 + Leu TAA [ENA]
>WENV170914084 MDTE01142988 [MDTE] marine metagenome; seawater 93 177 + Leu TAA [ENA]
>WENV170942721 MDTG01383125 [MDTG] marine metagenome; seawater 9 93 + Leu TAA [ENA]
>CHL090101798 CR954199 Viridiplantae Ostreococcus tauri 49511 49593 + Leu TAA [ENA]
Identical group No.167554 (3 seq.)
>WENV170682739 LFIK01000990 [LFIK] soda lake metagenome; sample T5-Br; brine of Lake Tanatar-5 11060 11142 + Leu TAA [ENA]
>WENV170702313 LKMJ01001260 [LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake 11060 11142 + Leu TAA [ENA]
>CHL1810012787 KJ746599 Viridiplantae Picocystis salinarum (KJ746599) 65119 65201 + Leu TAA [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
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