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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180010814
FLSD01191354
176353
Actinomycetota
CAA
Leu
>WENV180010751
FLSD01105598
186868
Actinomycetota
CAA
Leu
>WENV180010479
FLSD01000970
180071
Actinomycetota
CAT
Met
>WENV180010614
FLSD01026642
285876
Actinomycetota
CGT
Thr
>WENV180010624
FLSD01028152
287452
Actinomycetota
CGT
Thr
>WENV180010451
FLSD01000234
284889
Actinomycetota
CTC
Glu
>WENV180010847
FLSD01223720
284889
Actinomycetota
CTC
Glu
>WENV180010507
FLSD01003127
284890
Actinomycetota
CTT
Lys
>WENV180010777
FLSD01137781
46668
Actinomycetota
GAG
Leu
>WENV180010787
FLSD01153464
176317
Actinomycetota
GAT
Ile
>WENV180010435
FLSD01000060
284887
Actinomycetota
GCC
Gly
>WENV180010449
FLSD01000234
284887
Actinomycetota
GCC
Gly
>WENV180010813
FLSD01190361
118693
Actinomycetota
GTA
Tyr
>WENV180010478
FLSD01000970
124580
Actinomycetota
GTA
Tyr
>WENV180010487
FLSD01001224
280744
Actinomycetota
GTG
His
>WENV180010645
FLSD01036456
179433
Actinomycetota
TAA
Leu
>WENV180010486
FLSD01001224
290430
Actinomycetota
TCT
Arg
>WENV180010632
FLSD01029202
184065
Actinomycetota
TGG
Pro
>WENV180010474
FLSD01000736
187640
Actinomycetota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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