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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183573353
OOCH01000001
338148
Actinomycetota
CTG
Gln
>WENV183573354
OOCH01000001
235121
Actinomycetota
CGT
Thr
>WENV183573355
OOCH01000001
113601
Actinomycetota
TAG
Leu
>WENV183573358
OOCH01000001
98279
Actinomycetota
GTA
Tyr
>WENV183573360
OOCH01000001
37070
Actinomycetota
CGA
Ser
>WENV183573361
OOCH01000001
16467
Actinomycetota
GCT
Ser
>WENV183573442
OOCH01000084
235101
Actinomycetota
TTT
Lys
>WENV183573524
OOCH01000180
278447
Actinomycetota
GTG
His
>WENV183573554
OOCH01000216
119485
Actinomycetota
TAA
Leu
>WENV183573565
OOCH01000226
198659
Actinomycetota
TAC
Val
>WENV183573570
OOCH01000236
411554
Actinomycetota
CCC
Gly
>WENV183573571
OOCH01000236
80622
Actinomycetota
CAG
Leu
>WENV183573614
OOCH01000306
235149
Actinomycetota
CCT
Arg
>WENV183573703
OOCH01000513
235148
Actinomycetota
GTT
Asn
>WENV183573723
OOCH01000565
254857
Actinomycetota
CCG
Arg
>WENV183573724
OOCH01000569
145269
Actinomycetota
CAT
Met
>WENV183573819
OOCH01000898
44942
Actinomycetota
TGA
Ser
>WENV183573838
OOCH01001007
176456
Actinomycetota
TCT
Arg
>WENV183573840
OOCH01001022
144589
Actinomycetota
ACG
Arg
>WENV183573857
OOCH01001081
235174
Actinomycetota
TGC
Ala
>WENV183573858
OOCH01001081
235173
Actinomycetota
GGC
Ala
>WENV183574205
OOCH01003829
145347
Actinomycetota
CAA
Leu
>WENV183574242
OOCH01004757
144635
Actinomycetota
TGG
Pro
>WENV183574416
OOCH01012238
245301
Actinomycetota
GCC
Gly
>WENV183574489
OOCH01017278
144636
Actinomycetota
GAT
Ile
>WENV183574706
OOCH01056966
414234
Actinomycetota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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