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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183578365
OOCL01000535
235153
Actinomycetota
CCT
Arg
>WENV183578066
OOCL01000004
144589
Actinomycetota
ACG
Arg
>WENV183578048
OOCL01000002
37070
Actinomycetota
CGA
Ser
>WENV183578652
OOCL01005065
245301
Actinomycetota
GCC
Gly
>WENV183578074
OOCL01000007
162208
Actinomycetota
TAC
Val
>WENV183578119
OOCL01000024
235174
Actinomycetota
TGC
Ala
>WENV183578143
OOCL01000045
235101
Actinomycetota
TTT
Lys
>WENV183578582
OOCL01003033
153948
Actinomycetota
GGG
Pro
>WENV183578170
OOCL01000073
254857
Actinomycetota
CCG
Arg
>WENV183578058
OOCL01000002
44942
Actinomycetota
TGA
Ser
>WENV183578236
OOCL01000169
144636
Actinomycetota
GAT
Ile
>WENV183578056
OOCL01000002
98279
Actinomycetota
GTA
Tyr
>WENV183578051
OOCL01000002
338148
Actinomycetota
CTG
Gln
>WENV183578415
OOCL01000783
235148
Actinomycetota
GTT
Asn
>WENV183578331
OOCL01000440
176456
Actinomycetota
TCT
Arg
>WENV183578068
OOCL01000004
145347
Actinomycetota
CAA
Leu
>WENV183578049
OOCL01000002
16467
Actinomycetota
GCT
Ser
>WENV183578116
OOCL01000024
411554
Actinomycetota
CCC
Gly
>WENV183578053
OOCL01000002
113601
Actinomycetota
TAG
Leu
>WENV183578065
OOCL01000004
145343
Actinomycetota
GGG
Pro
>WENV183578315
OOCL01000381
235149
Actinomycetota
CCT
Arg
>WENV183578505
OOCL01001517
414234
Actinomycetota
CTG
Gln
>WENV183578185
OOCL01000082
145269
Actinomycetota
CAT
Met
>WENV183578052
OOCL01000002
235121
Actinomycetota
CGT
Thr
>WENV183578483
OOCL01001289
144635
Actinomycetota
TGG
Pro
>WENV183578312
OOCL01000368
61501
Actinomycetota
CAG
Leu
>WENV183578067
OOCL01000004
119485
Actinomycetota
TAA
Leu
>WENV183578117
OOCL01000024
80622
Actinomycetota
CAG
Leu
>WENV183578569
OOCL01002548
158513
Actinomycetota
TGG
Pro
>WENV183578416
OOCL01000783
235173
Actinomycetota
GGC
Ala
>WENV183578120
OOCL01000024
235173
Actinomycetota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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