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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183579176
OOCM01000269
411554
Actinomycetota
CCC
Gly
>WENV183579177
OOCM01000269
80622
Actinomycetota
CAG
Leu
>WENV183579336
OOCM01000597
145347
Actinomycetota
CAA
Leu
>WENV183579355
OOCM01000676
235174
Actinomycetota
TGC
Ala
>WENV183579356
OOCM01000676
235173
Actinomycetota
GGC
Ala
>WENV183579358
OOCM01000690
176456
Actinomycetota
TCT
Arg
>WENV183579369
OOCM01000716
37070
Actinomycetota
CGA
Ser
>WENV183579402
OOCM01000824
235092
Actinomycetota
CCG
Arg
>WENV183579406
OOCM01000833
44942
Actinomycetota
TGA
Ser
>WENV183579450
OOCM01000934
235101
Actinomycetota
TTT
Lys
>WENV183579452
OOCM01000944
145269
Actinomycetota
CAT
Met
>WENV183579560
OOCM01001523
235149
Actinomycetota
CCT
Arg
>WENV183579563
OOCM01001531
338148
Actinomycetota
CTG
Gln
>WENV183579581
OOCM01001679
278447
Actinomycetota
GTG
His
>WENV183579598
OOCM01001750
198659
Actinomycetota
TAC
Val
>WENV183579601
OOCM01001756
145343
Actinomycetota
GGG
Pro
>WENV183579604
OOCM01001774
113601
Actinomycetota
TAG
Leu
>WENV183579603
OOCM01001774
235121
Actinomycetota
CGT
Thr
>WENV183579606
OOCM01001779
144635
Actinomycetota
TGG
Pro
>WENV183579611
OOCM01001802
98279
Actinomycetota
GTA
Tyr
>WENV183579686
OOCM01002625
144589
Actinomycetota
ACG
Arg
>WENV183579712
OOCM01003035
119485
Actinomycetota
TAA
Leu
>WENV183579747
OOCM01003415
16219
Actinomycetota
GCT
Ser
>WENV183579752
OOCM01003546
235148
Actinomycetota
GTT
Asn
>WENV183579771
OOCM01003702
235173
Actinomycetota
GGC
Ala
>WENV183580084
OOCM01016108
37070
Actinomycetota
CGA
Ser
>WENV183580129
OOCM01020899
245301
Actinomycetota
GCC
Gly
>WENV183580128
OOCM01020899
412834
Actinomycetota
GCA
Cys
>WENV183580155
OOCM01024249
113601
Actinomycetota
TAG
Leu
>WENV183580162
OOCM01024987
144593
Actinomycetota
TAT
Ile
>WENV183580362
OOCM01072577
414234
Actinomycetota
CTG
Gln
>WENV183580365
OOCM01075792
119475
Actinomycetota
TAA
Leu
>WENV183580370
OOCM01078341
411601
Actinomycetota
CCC
Gly
>WENV183580399
OOCM01093396
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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