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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183599873
OODH01016108
144589
Actinomycetota
ACG
Arg
>WENV183599625
OODH01002709
37070
Actinomycetota
CGA
Ser
>WENV183600038
OODH01043676
235092
Actinomycetota
CCG
Arg
>WENV183599476
OODH01000884
235174
Actinomycetota
TGC
Ala
>WENV183599567
OODH01001800
235101
Actinomycetota
TTT
Lys
>WENV183599693
OODH01004136
44942
Actinomycetota
TGA
Ser
>WENV183599849
OODH01014132
243671
Actinomycetota
CTC
Glu
>WENV183599755
OODH01006563
98279
Actinomycetota
GTA
Tyr
>WENV183599850
OODH01014132
338148
Actinomycetota
CTG
Gln
>WENV183599792
OODH01008556
235148
Actinomycetota
GTT
Asn
>WENV183599897
OODH01019082
411554
Actinomycetota
CCC
Gly
>WENV183599613
OODH01002520
235149
Actinomycetota
CCT
Arg
>WENV183599886
OODH01018064
235121
Actinomycetota
CGT
Thr
>WENV183599847
OODH01013809
144635
Actinomycetota
TGG
Pro
>WENV183600012
OODH01037937
119485
Actinomycetota
TAA
Leu
>WENV183599609
OODH01002475
80622
Actinomycetota
CAG
Leu
>WENV183599821
OODH01010847
147734
Actinomycetota
GTC
Asp
>WENV183599477
OODH01000884
235173
Actinomycetota
GGC
Ala
>WENV183599919
OODH01022610
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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