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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183736344
PJUC01000947
102100
Actinomycetota
GAG
Leu
>WENV183736426
PJUC01003021
401484
Actinomycetota
GCC
Gly
>WENV183736185
PJUC01000101
195667
Actinomycetota
GAT
Ile
>WENV183736314
PJUC01000581
494604
Actinomycetota
TCC
Gly
>WENV183736267
PJUC01000366
282995
Actinomycetota
TAA
Leu
>WENV183736311
PJUC01000554
298209
Actinomycetota
CGT
Thr
>WENV183736401
PJUC01001920
298209
Actinomycetota
CGT
Thr
>WENV183736577
PJUC01015050
298209
Actinomycetota
CGT
Thr
>WENV183736202
PJUC01000128
366609
Actinomycetota
TTT
Lys
>WENV183736296
PJUC01000455
289513
Actinomycetota
CTT
Lys
>WENV183736197
PJUC01000120
57288
Actinomycetota
TGA
Ser
>WENV183736243
PJUC01000233
20383
Actinomycetota
CGA
Ser
>WENV183736272
PJUC01000371
57196
Actinomycetota
GAG
Leu
>WENV183736299
PJUC01000480
409463
Actinomycetota
CAC
Val
>WENV183736201
PJUC01000127
219754
Actinomycetota
CAT
Met
>WENV183736315
PJUC01000581
191938
Actinomycetota
TGG
Pro
>WENV183736280
PJUC01000384
399009
Actinomycetota
CTG
Gln
>WENV183736592
PJUC01018529
282988
Actinomycetota
GTT
Asn
>WENV183736346
PJUC01000960
289657
Actinomycetota
TGT
Thr
>WENV183736281
PJUC01000384
319361
Actinomycetota
CTC
Glu
>WENV183736274
PJUC01000376
298207
Actinomycetota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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