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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182553558
OJCR01010861
175748
Alphaproteobacteria
CAT
Met
>WENV182553783
OJCR01031584
241021
Alphaproteobacteria
GGC
Ala
>WENV182553799
OJCR01033826
256971
Alphaproteobacteria
TGT
Thr
>WENV182553828
OJCR01036844
191695
Alphaproteobacteria
CCT
Arg
>WENV182553875
OJCR01045312
113700
Alphaproteobacteria
>WENV182553879
OJCR01045753
150356
Alphaproteobacteria
GTC
Asp
>WENV182553886
OJCR01048151
300133
Alphaproteobacteria
TAC
Val
>WENV182553888
OJCR01048421
80918
Alphaproteobacteria
GAG
Leu
>WENV182553903
OJCR01051211
66752
Alphaproteobacteria
CAG
Leu
>WENV182553904
OJCR01051383
191695
Alphaproteobacteria
CCT
Arg
>WENV182553956
OJCR01066802
127020
Alphaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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