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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183616908
OOEE01009181
192195
Alphaproteobacteria
GTC
Asp
>WENV183616915
OOEE01010016
59164
Alphaproteobacteria
GAG
Leu
>WENV183616929
OOEE01012301
191695
Alphaproteobacteria
CCT
Arg
>WENV183616984
OOEE01022256
99414
Alphaproteobacteria
GTA
Tyr
>WENV183616988
OOEE01022942
147083
Alphaproteobacteria
GGG
Pro
>WENV183617006
OOEE01027339
95928
Alphaproteobacteria
TAG
Leu
>WENV183617007
OOEE01027555
412477
Alphaproteobacteria
GCA
Cys
>WENV183617082
OOEE01048918
147334
Alphaproteobacteria
CAT
Met
>WENV183617097
OOEE01055715
350557
Alphaproteobacteria
TTT
Lys
>WENV183617128
OOEE01066013
236256
Alphaproteobacteria
TAC
Val
>WENV183617260
OOEE01131239
377327
Alphaproteobacteria
GCC
Gly
>WENV183617328
OOEE01178854
29508
Alphaproteobacteria
GGA
Ser
>WENV183617384
OOEE01218728
339846
Alphaproteobacteria
GAC
Val
>WENV183617433
OOEE01260272
357160
Alphaproteobacteria
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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