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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183630622
OOGU01000015
33571
Alphaproteobacteria
TGA
Ser
>WENV183630623
OOGU01000018
400031
Alphaproteobacteria
TTG
Gln
>WENV183630632
OOGU01000030
78115
Alphaproteobacteria
GAG
Leu
>WENV183630744
OOGU01001415
284846
Alphaproteobacteria
CGT
Thr
>WENV183630771
OOGU01001891
406748
Alphaproteobacteria
TAC
Val
>WENV183630889
OOGU01007345
432650
Alphaproteobacteria
GAA
Phe
>WENV183630929
OOGU01009636
400544
Alphaproteobacteria
GGT
Thr
>WENV183630935
OOGU01009909
400693
Alphaproteobacteria
GCC
Gly
>WENV183630985
OOGU01014402
400517
Alphaproteobacteria
GGT
Thr
>WENV183631051
OOGU01022721
178784
Alphaproteobacteria
CAT
Met
>WENV183631098
OOGU01030518
215287
Alphaproteobacteria
GGG
Pro
>WENV183631109
OOGU01032762
210541
Alphaproteobacteria
CAT
Met
>WENV183631149
OOGU01041532
400693
Alphaproteobacteria
GCC
Gly
>WENV183631174
OOGU01045141
287439
Alphaproteobacteria
CCA
Trp
>WENV183631222
OOGU01052998
299509
Alphaproteobacteria
GTT
Asn
>WENV183631221
OOGU01052998
480900
Alphaproteobacteria
GCA
Cys
>WENV183631272
OOGU01066589
178734
Alphaproteobacteria
TGG
Pro
>WENV183631271
OOGU01066589
178733
Alphaproteobacteria
CAT
Met
>WENV183631281
OOGU01068666
329227
Alphaproteobacteria
TGC
Ala
>WENV183631283
OOGU01068666
329227
Alphaproteobacteria
TGC
Ala
>WENV183631399
OOGU01099844
427571
Alphaproteobacteria
GCC
Gly
>WENV183631401
OOGU01100045
291892
Alphaproteobacteria
TAC
Val
>WENV183631449
OOGU01117034
281676
Alphaproteobacteria
TAC
Val
>WENV183631479
OOGU01128942
296698
Alphaproteobacteria
CGC
Ala
>WENV183631492
OOGU01133649
283596
Alphaproteobacteria
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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